RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 ZNF391Q9UJN7 358 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 AMDHD2Q9Y303 409 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 TLN1Q9Y490 2541 aaKnown RBP11.03□□□□□ -0.64
DDX39A-202ENST00000324340 A0A1W2PPK0 400 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 LOC390937A0A1W2PQ73 354 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 ANKRD20A5PA0PJZ0 165 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 F5H5P2 479 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 MT-ND4P03905 459 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 CD2P06729 351 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 IGFBP3P17936 291 aaPredicted RBP11.03□□□□□ -0.64
DDX39A-202ENST00000324340 SCAND1P57086 179 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 SRSF4Q08170 494 aaKnown RBP11.03□□□□□ -0.64
DDX39A-202ENST00000324340 TIMM23BQ5SRD1 257 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 HES5Q5TA89 166 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 ASPHD2Q6ICH7 369 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 DNM1P46Q6ZS02 220 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 DNAAF1Q8NEP3 725 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 OR13C3Q8NGS6 347 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 RAB40AQ8WXH6 277 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 SPSB4Q96A44 273 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 SGK3Q96BR1 496 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 C1QTNF6Q9BXI9 259 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 ALX4Q9H161 411 aaPredicted RBP11.03□□□□□ -0.64
DDX39A-202ENST00000324340 OR10A4Q9H209 315 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 TAS2R3Q9NYW6 316 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 FOXJ3Q9UPW0 622 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 OSGIN2Q9Y236 505 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 SLC25A15Q9Y619 301 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 V9GYS6 101 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 TMEM218A2RU14 115 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 C5orf49A4QMS7 147 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 RFPL4AA6NLU0 287 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 DHRS7CA6NNS2 312 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 DISC1C4P0D8 188 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 RFPL4AL1F8VTS6 287 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 J3QW42 95 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 KDM4BO94953 1096 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 OR2F2O95006 317 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 IGLV1-44P01699 117 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 RLN2P04090 185 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 LCATP04180 440 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 APLNRP35414 380 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 MADCAM1Q13477 382 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 OR2F1Q13607 317 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 C3orf36Q3SXR2 165 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 LRRTM1Q86UE6 522 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 SLC30A7Q8NEW0 376 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 BPIFCQ8NFQ6 507 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 BEST4Q8NFU0 473 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 OR10K1Q8NGX5 313 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 OR14K1Q8NGZ2 314 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 APOBEC3DQ96AK3 386 aaPredicted RBP11.02□□□□□ -0.65
DDX39A-202ENST00000324340 TSNAXQ99598 290 aaKnown RBP11.02□□□□□ -0.65
DDX39A-202ENST00000324340 SOX7Q9BT81 388 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 SEBOXQ9HB31 216 aaPredicted RBP11.02□□□□□ -0.65
DDX39A-202ENST00000324340 TCF7L1Q9HCS4 588 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 MYOZ1Q9NP98 299 aaPredicted RBP11.02□□□□□ -0.65
DDX39A-202ENST00000324340 TAS2R8Q9NYW2 309 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 EDARQ9UNE0 448 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 PKD1L2Q7Z442 2459 aa11.02□□□□□ -0.65
DDX39A-202ENST00000324340 TRAV8-7A0A075B6U6 113 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 A0A1W2PR80 420 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 LINC00587B1AMM8 73 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 EEF1E1-BLOC1S5C9J1V9 151 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 H3BSH0 61 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 CCL21O00585 134 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 XRCC2O43543 280 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 LMX1BO60663 402 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 DHRS3O75911 302 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 FCER2P06734 321 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 MELTFP08582 738 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 CD37P11049 281 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 EPXP11678 715 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 ADRA2CP18825 462 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 PMELP40967 661 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 RAB5BP61020 215 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 MRPL49Q13405 166 aaKnown RBP11.01□□□□□ -0.65
DDX39A-202ENST00000324340 TBC1D28Q2M2D7 210 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 GLYATL3Q5SZD4 288 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 LPCAT3Q6P1A2 487 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 ZNF529Q6P280 563 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 SERPINA12Q8IW75 414 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 KCNRGQ8N5I3 272 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 STEAP2Q8NFT2 490 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 OR1J2Q8NGS2 313 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 FCAMRQ8WWV6 532 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 S100PBPQ96BU1 408 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 C10orf35Q96D05 121 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 GFI1Q99684 422 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 EGLN1Q9GZT9 426 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 SLITRK2Q9H156 845 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 TMEM138Q9NPI0 162 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 GSN-AS1Q9NRJ2 163 aa11.01□□□□□ -0.65
DDX39A-202ENST00000324340 RALYQ9UKM9 306 aaKnown RBP11.01□□□□□ -0.65
DDX39A-202ENST00000324340 DSPP15924 2871 aaKnown RBP11□□□□□ -0.65
DDX39A-202ENST00000324340 UBE2CO00762 179 aa11□□□□□ -0.65
DDX39A-202ENST00000324340 ARPC1BO15143 372 aaKnown RBP11□□□□□ -0.65
DDX39A-202ENST00000324340 CELA3BP08861 270 aa11□□□□□ -0.65
DDX39A-202ENST00000324340 SLC25A4P12235 298 aa11□□□□□ -0.65
DDX39A-202ENST00000324340 CCL2P13500 99 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms