RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 CSTBP04080 98 aaKnown RBP15.75■□□□□ 0.11
USP39-201ENST00000323701 H2AFB2P0C5Z0 115 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 ZNF83P51522 516 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 BTG1P62324 171 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 MRPS15P82914 257 aaKnown RBP15.75■□□□□ 0.11
USP39-201ENST00000323701 TMEM229BQ8NBD8 167 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 RELL2Q8NC24 303 aaPredicted RBP15.75■□□□□ 0.11
USP39-201ENST00000323701 PXT1Q8NFP0 134 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 STEAP2Q8NFT2 490 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 ST8SIA4Q92187 359 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 MTCH1Q9NZJ7 389 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 IL36RNQ9UBH0 155 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 SHANK1Q9Y566 2161 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 IGHV3-64DA0A0J9YX35 117 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 J3QW42 95 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 CYB5AP00167 134 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 GSTP1P09211 210 aaKnown RBP15.75■□□□□ 0.11
USP39-201ENST00000323701 ZNF735P0CB33 412 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 BCL3P20749 454 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 CPT2P23786 658 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 CDK10Q15131 360 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 NKAPLQ5M9Q1 402 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 WDR86Q86TI4 376 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 FBXW5Q969U6 566 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 CPNE2Q96FN4 548 aaPredicted RBP15.75■□□□□ 0.11
USP39-201ENST00000323701 COPZ2Q9P299 210 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 ZNF230Q9UIE0 474 aaPredicted RBP15.75■□□□□ 0.11
USP39-201ENST00000323701 COL6A6A6NMZ7 2263 aa15.74■□□□□ 0.11
USP39-201ENST00000323701 ARPC1BO15143 372 aaKnown RBP15.74■□□□□ 0.11
USP39-201ENST00000323701 CSN2P05814 226 aa15.74■□□□□ 0.11
USP39-201ENST00000323701 TAS2R19P59542 299 aa15.74■□□□□ 0.11
USP39-201ENST00000323701 GNG2P59768 71 aa15.74■□□□□ 0.11
USP39-201ENST00000323701 MSMPQ1L6U9 139 aa15.74■□□□□ 0.11
USP39-201ENST00000323701 Q5BKY6 102 aa15.74■□□□□ 0.11
USP39-201ENST00000323701 TIMM23BQ5SRD1 257 aa15.74■□□□□ 0.11
USP39-201ENST00000323701 ZNF782Q6ZMW2 699 aaPredicted RBP15.74■□□□□ 0.11
USP39-201ENST00000323701 NOXA1Q86UR1 476 aa15.74■□□□□ 0.11
USP39-201ENST00000323701 FTMTQ8N4E7 242 aa15.74■□□□□ 0.11
USP39-201ENST00000323701 OR5A2Q8NGI9 324 aa15.74■□□□□ 0.11
USP39-201ENST00000323701 MAFIPQ8WZ33 124 aa15.74■□□□□ 0.11
USP39-201ENST00000323701 ZNF488Q96MN9 340 aa15.74■□□□□ 0.11
USP39-201ENST00000323701 HDHD3Q9BSH5 251 aaPredicted RBP15.74■□□□□ 0.11
USP39-201ENST00000323701 ACTR6Q9GZN1 396 aa15.74■□□□□ 0.11
USP39-201ENST00000323701 GHITMQ9H3K2 345 aa15.74■□□□□ 0.11
USP39-201ENST00000323701 OBP2BQ9NPH6 170 aa15.74■□□□□ 0.11
USP39-201ENST00000323701 AMDHD2Q9Y303 409 aa15.74■□□□□ 0.11
USP39-201ENST00000323701 ZNF736B4DX44 427 aaPredicted RBP15.73■□□□□ 0.11
USP39-201ENST00000323701 H0YL77 283 aa15.73■□□□□ 0.11
USP39-201ENST00000323701 SLC34A2O95436 690 aa15.73■□□□□ 0.11
USP39-201ENST00000323701 RAB3DO95716 219 aa15.73■□□□□ 0.11
USP39-201ENST00000323701 CD74P04233 296 aa15.73■□□□□ 0.11
USP39-201ENST00000323701 SELEP16581 610 aa15.73■□□□□ 0.11
USP39-201ENST00000323701 OPRM1P35372 400 aa15.73■□□□□ 0.11
USP39-201ENST00000323701 NKPD1Q17RQ9 610 aa15.73■□□□□ 0.11
USP39-201ENST00000323701 SEZ6L2Q6UXD5 910 aa15.73■□□□□ 0.11
USP39-201ENST00000323701 GIMAP1Q8WWP7 306 aa15.73■□□□□ 0.11
USP39-201ENST00000323701 DYRK2Q92630 601 aa15.73■□□□□ 0.11
USP39-201ENST00000323701 SLC6A7Q99884 636 aa15.73■□□□□ 0.11
USP39-201ENST00000323701 IL36GQ9NZH8 169 aa15.73■□□□□ 0.11
USP39-201ENST00000323701 ST3GAL6Q9Y274 331 aa15.73■□□□□ 0.11
USP39-201ENST00000323701 MPC1Q9Y5U8 109 aa15.73■□□□□ 0.11
USP39-201ENST00000323701 MED19A0JLT2 244 aaPredicted RBP15.73■□□□□ 0.11
USP39-201ENST00000323701 NDUFB6O95139 128 aa15.73■□□□□ 0.11
USP39-201ENST00000323701 HPXP02790 462 aa15.73■□□□□ 0.11
USP39-201ENST00000323701 RAC2P15153 192 aa15.73■□□□□ 0.11
USP39-201ENST00000323701 SNU13P55769 128 aaKnown RBP15.73■□□□□ 0.11
USP39-201ENST00000323701 HAGHLQ6PII5 290 aaPredicted RBP15.73■□□□□ 0.11
USP39-201ENST00000323701 OSR2Q8N2R0 312 aa15.73■□□□□ 0.11
USP39-201ENST00000323701 FAAP24Q9BTP7 215 aa15.73■□□□□ 0.11
USP39-201ENST00000323701 PYCARD-AS1I3L0S3 204 aa15.72■□□□□ 0.11
USP39-201ENST00000323701 ANXA7P20073 488 aaKnown RBP15.72■□□□□ 0.11
USP39-201ENST00000323701 RBMXP38159 391 aaKnown RBP15.72■□□□□ 0.11
USP39-201ENST00000323701 FABP6P51161 128 aa15.72■□□□□ 0.11
USP39-201ENST00000323701 NAAAQ02083 359 aa15.72■□□□□ 0.11
USP39-201ENST00000323701 OR10AD1Q8NGE0 317 aa15.72■□□□□ 0.11
USP39-201ENST00000323701 TMEM246Q9BRR3 403 aa15.72■□□□□ 0.11
USP39-201ENST00000323701 PLCE1Q9P212 2302 aa15.72■□□□□ 0.11
USP39-201ENST00000323701 C7orf66A4D0T2 115 aa15.72■□□□□ 0.11
USP39-201ENST00000323701 M0R1B8 84 aa15.72■□□□□ 0.11
USP39-201ENST00000323701 ZNF780AO75290 641 aaPredicted RBP15.72■□□□□ 0.11
USP39-201ENST00000323701 RHBDL1O75783 438 aa15.72■□□□□ 0.11
USP39-201ENST00000323701 AMY2AP04746 511 aa15.72■□□□□ 0.11
USP39-201ENST00000323701 HRH1P35367 487 aa15.72■□□□□ 0.11
USP39-201ENST00000323701 RAD52P43351 418 aa15.72■□□□□ 0.11
USP39-201ENST00000323701 KLRB1Q12918 225 aa15.72■□□□□ 0.11
USP39-201ENST00000323701 LY6DQ14210 128 aa15.72■□□□□ 0.11
USP39-201ENST00000323701 ST3GAL2Q16842 350 aa15.72■□□□□ 0.11
USP39-201ENST00000323701 ASCC1Q8N9N2 400 aaKnown RBP15.72■□□□□ 0.11
USP39-201ENST00000323701 SULT4A1Q9BR01 284 aa15.72■□□□□ 0.11
USP39-201ENST00000323701 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.72■□□□□ 0.11
USP39-201ENST00000323701 PLEKHJ1Q9NW61 149 aa15.72■□□□□ 0.11
USP39-201ENST00000323701 ANAPC10Q9UM13 185 aa15.72■□□□□ 0.11
USP39-201ENST00000323701 ICE1Q9Y2F5 2266 aa15.71■□□□□ 0.11
USP39-201ENST00000323701 IGKV1D-8A0A087WSZ0 117 aa15.71■□□□□ 0.11
USP39-201ENST00000323701 IQCF6A8MYZ5 107 aa15.71■□□□□ 0.11
USP39-201ENST00000323701 PEX14O75381 377 aa15.71■□□□□ 0.11
USP39-201ENST00000323701 CHATP28329 748 aa15.71■□□□□ 0.11
USP39-201ENST00000323701 FAUP35544 74 aaKnown RBP15.71■□□□□ 0.11
USP39-201ENST00000323701 RBM11P57052 281 aaKnown RBP15.71■□□□□ 0.11
USP39-201ENST00000323701 ARPC4P59998 168 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms