RNA–Protein interactions for RNA: ENST00000304954.3

CSN3-201, Transcript of casein kappa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSN3, Length 836 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3-201ENST00000304954 GLS2Q9UI32 602 aa2.54□□□□□ -2
CSN3-201ENST00000304954 DNAJC12Q9UKB3 198 aa2.54□□□□□ -2
CSN3-201ENST00000304954 HEY1Q9Y5J3 304 aa2.54□□□□□ -2
CSN3-201ENST00000304954 TSSC4Q9Y5U2 329 aaPredicted RBP2.54□□□□□ -2
CSN3-201ENST00000304954 WIF1Q9Y5W5 379 aa2.54□□□□□ -2
CSN3-201ENST00000304954 PRDM2Q13029 1718 aa2.54□□□□□ -2
CSN3-201ENST00000304954 NCAPD3P42695 1498 aa2.53□□□□□ -2
CSN3-201ENST00000304954 KIF27Q86VH2 1401 aa2.53□□□□□ -2
CSN3-201ENST00000304954 ERBINQ96RT1 1412 aa2.53□□□□□ -2
CSN3-201ENST00000304954 CNTLNQ9NXG0 1405 aa2.53□□□□□ -2
CSN3-201ENST00000304954 UBN2Q6ZU65 1347 aa2.53□□□□□ -2
CSN3-201ENST00000304954 KBTBD11-OT1A0A1B0GTJ5 212 aa2.53□□□□□ -2
CSN3-201ENST00000304954 A0A1B0GUH1 482 aa2.53□□□□□ -2
CSN3-201ENST00000304954 A0A1W2PPV4 95 aa2.53□□□□□ -2
CSN3-201ENST00000304954 VPS37CA5D8V6 355 aaPredicted RBP2.53□□□□□ -2
CSN3-201ENST00000304954 OR2AT4A6NND4 320 aa2.53□□□□□ -2
CSN3-201ENST00000304954 KRBOX1C9JBD0 128 aa2.53□□□□□ -2
CSN3-201ENST00000304954 TNFRSF11BO00300 401 aa2.53□□□□□ -2
CSN3-201ENST00000304954 TXNDC9O14530 226 aa2.53□□□□□ -2
CSN3-201ENST00000304954 GLSO94925 669 aaPredicted RBP2.53□□□□□ -2
CSN3-201ENST00000304954 RNASE2P10153 161 aaKnown RBP2.53□□□□□ -2
CSN3-201ENST00000304954 CD37P11049 281 aa2.53□□□□□ -2
CSN3-201ENST00000304954 SRMP19623 302 aa2.53□□□□□ -2
CSN3-201ENST00000304954 BCKDHBP21953 392 aa2.53□□□□□ -2
CSN3-201ENST00000304954 STOMP27105 288 aa2.53□□□□□ -2
CSN3-201ENST00000304954 CRABP1P29762 137 aa2.53□□□□□ -2
CSN3-201ENST00000304954 OR1E1P30953 314 aa2.53□□□□□ -2
CSN3-201ENST00000304954 SLC1A2P43004 574 aa2.53□□□□□ -2
CSN3-201ENST00000304954 OMPP47874 163 aa2.53□□□□□ -2
CSN3-201ENST00000304954 RAB9AP51151 201 aa2.53□□□□□ -2
CSN3-201ENST00000304954 BCAP31P51572 246 aa2.53□□□□□ -2
CSN3-201ENST00000304954 GFERP55789 205 aa2.53□□□□□ -2
CSN3-201ENST00000304954 RAB11AP62491 216 aa2.53□□□□□ -2
CSN3-201ENST00000304954 VSNL1P62760 191 aa2.53□□□□□ -2
CSN3-201ENST00000304954 TNNC1P63316 161 aa2.53□□□□□ -2
CSN3-201ENST00000304954 SLC39A6Q13433 755 aa2.53□□□□□ -2
CSN3-201ENST00000304954 KRR1Q13601 381 aaKnown RBP2.53□□□□□ -2
CSN3-201ENST00000304954 RAB11BQ15907 218 aa2.53□□□□□ -2
CSN3-201ENST00000304954 RNASE13Q5GAN3 156 aaKnown RBP2.53□□□□□ -2
CSN3-201ENST00000304954 NDUFAF7Q7L592 441 aa2.53□□□□□ -2
CSN3-201ENST00000304954 DPPA2Q7Z7J5 298 aa2.53□□□□□ -2
CSN3-201ENST00000304954 SETD3Q86TU7 594 aaPredicted RBP2.53□□□□□ -2
CSN3-201ENST00000304954 RBM45Q8IUH3 476 aaKnown RBP2.53□□□□□ -2
CSN3-201ENST00000304954 SPANXA2-OT1Q8N9U9 137 aa2.53□□□□□ -2
CSN3-201ENST00000304954 ST20-AS1Q8NBB2 130 aa2.53□□□□□ -2
CSN3-201ENST00000304954 C11orf72Q8NBR9 251 aa2.53□□□□□ -2
CSN3-201ENST00000304954 GRPEL2Q8TAA5 225 aa2.53□□□□□ -2
CSN3-201ENST00000304954 CIRBP-AS1Q8TBR5 109 aa2.53□□□□□ -2
CSN3-201ENST00000304954 BORCS5Q969J3 196 aa2.53□□□□□ -2
CSN3-201ENST00000304954 YIPF5Q969M3 257 aa2.53□□□□□ -2
CSN3-201ENST00000304954 TMBIM1Q969X1 311 aa2.53□□□□□ -2
CSN3-201ENST00000304954 DGCR14Q96DF8 476 aaKnown RBP2.53□□□□□ -2
CSN3-201ENST00000304954 NEURL3Q96EH8 262 aa2.53□□□□□ -2
CSN3-201ENST00000304954 SGTBQ96EQ0 304 aa2.53□□□□□ -2
CSN3-201ENST00000304954 GLT1D1Q96MS3 346 aa2.53□□□□□ -2
CSN3-201ENST00000304954 QKIQ96PU8 341 aaKnown RBP eCLIP2.53□□□□□ -2
CSN3-201ENST00000304954 GPR21Q99679 349 aa2.53□□□□□ -2
CSN3-201ENST00000304954 RBBP8Q99708 897 aa2.53□□□□□ -2
CSN3-201ENST00000304954 PRRT1Q99946 306 aa2.53□□□□□ -2
CSN3-201ENST00000304954 TIPINQ9BVW5 301 aa2.53□□□□□ -2
CSN3-201ENST00000304954 GAL3ST2Q9H3Q3 398 aa2.53□□□□□ -2
CSN3-201ENST00000304954 CD209Q9NNX6 404 aa2.53□□□□□ -2
CSN3-201ENST00000304954 C8orf17Q9NRJ1 99 aa2.53□□□□□ -2
CSN3-201ENST00000304954 RGS18Q9NS28 235 aa2.53□□□□□ -2
CSN3-201ENST00000304954 CLN6Q9NWW5 311 aa2.53□□□□□ -2
CSN3-201ENST00000304954 CLN8Q9UBY8 286 aa2.53□□□□□ -2
CSN3-201ENST00000304954 STOML2Q9UJZ1 356 aa2.53□□□□□ -2
CSN3-201ENST00000304954 SIGLEC9Q9Y336 463 aa2.53□□□□□ -2
CSN3-201ENST00000304954 LRPPRCP42704 1394 aaKnown RBP2.52□□□□□ -2.01
CSN3-201ENST00000304954 EIF3AQ14152 1382 aaKnown RBP2.52□□□□□ -2.01
CSN3-201ENST00000304954 NRCAMQ92823 1304 aa2.52□□□□□ -2.01
CSN3-201ENST00000304954 TRAV25A0A0B4J276 109 aa2.52□□□□□ -2.01
CSN3-201ENST00000304954 SMIM31A0A1B0GVY4 71 aa2.52□□□□□ -2.01
CSN3-201ENST00000304954 NCBP2LA6PVI3 153 aaKnown RBP2.52□□□□□ -2.01
CSN3-201ENST00000304954 A8MUU9 505 aa2.52□□□□□ -2.01
CSN3-201ENST00000304954 PLIN3O60664 434 aa2.52□□□□□ -2.01
CSN3-201ENST00000304954 SHOX2O60902 331 aaPredicted RBP2.52□□□□□ -2.01
CSN3-201ENST00000304954 LDOC1O95751 146 aaPredicted RBP2.52□□□□□ -2.01
CSN3-201ENST00000304954 CYB5R3P00387 301 aaPredicted RBP2.52□□□□□ -2.01
CSN3-201ENST00000304954 RBP1P09455 135 aa2.52□□□□□ -2.01
CSN3-201ENST00000304954 LINC00614P0C842 121 aa2.52□□□□□ -2.01
CSN3-201ENST00000304954 OCMP0CE72 109 aaPredicted RBP2.52□□□□□ -2.01
CSN3-201ENST00000304954 GIMD1P0DJR0 217 aa2.52□□□□□ -2.01
CSN3-201ENST00000304954 G0S2P27469 103 aa2.52□□□□□ -2.01
CSN3-201ENST00000304954 LCN1P31025 176 aa2.52□□□□□ -2.01
CSN3-201ENST00000304954 PFN2P35080 140 aa2.52□□□□□ -2.01
CSN3-201ENST00000304954 RCVRNP35243 200 aa2.52□□□□□ -2.01
CSN3-201ENST00000304954 ARR3P36575 388 aa2.52□□□□□ -2.01
CSN3-201ENST00000304954 UBE2G2P60604 165 aa2.52□□□□□ -2.01
CSN3-201ENST00000304954 ACTBP60709 375 aa2.52□□□□□ -2.01
CSN3-201ENST00000304954 CXCR4P61073 352 aa2.52□□□□□ -2.01
CSN3-201ENST00000304954 ACTG1P63261 375 aa2.52□□□□□ -2.01
CSN3-201ENST00000304954 HPCAP84074 193 aa2.52□□□□□ -2.01
CSN3-201ENST00000304954 PNOCQ13519 176 aa2.52□□□□□ -2.01
CSN3-201ENST00000304954 ZNHIT3Q15649 155 aaPredicted RBP2.52□□□□□ -2.01
CSN3-201ENST00000304954 VAMP3Q15836 100 aa2.52□□□□□ -2.01
CSN3-201ENST00000304954 DEFB115Q30KQ5 88 aa2.52□□□□□ -2.01
CSN3-201ENST00000304954 KCTD16Q68DU8 428 aa2.52□□□□□ -2.01
CSN3-201ENST00000304954 STUMQ69YW2 141 aa2.52□□□□□ -2.01
CSN3-201ENST00000304954 NIPAL1Q6NVV3 410 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms