RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 WDR89Q96FK6 387 aaPredicted RBP15.35■□□□□ 0.05
SHANK1-201ENST00000293441 TMEFF2Q9UIK5 374 aaPredicted RBP15.35■□□□□ 0.05
SHANK1-201ENST00000293441 CD160O95971 181 aa15.35■□□□□ 0.05
SHANK1-201ENST00000293441 LIMS3P0CW19 117 aa15.35■□□□□ 0.05
SHANK1-201ENST00000293441 LIMS4P0CW20 117 aa15.35■□□□□ 0.05
SHANK1-201ENST00000293441 CNN1P51911 297 aaKnown RBP15.35■□□□□ 0.05
SHANK1-201ENST00000293441 TMEM147Q9BVK8 224 aa15.35■□□□□ 0.05
SHANK1-201ENST00000293441 ACTL6AO96019 429 aa15.35■□□□□ 0.05
SHANK1-201ENST00000293441 ZNF425Q6IV72 752 aa15.35■□□□□ 0.05
SHANK1-201ENST00000293441 LSM2Q9Y333 95 aaKnown RBP15.35■□□□□ 0.05
SHANK1-201ENST00000293441 DNASE2O00115 360 aaPredicted RBP15.34■□□□□ 0.05
SHANK1-201ENST00000293441 FPR2P25090 351 aa15.34■□□□□ 0.05
SHANK1-201ENST00000293441 AVPR2P30518 371 aa15.34■□□□□ 0.05
SHANK1-201ENST00000293441 PDZK1IP1Q13113 114 aa15.34■□□□□ 0.05
SHANK1-201ENST00000293441 MOB1BQ7L9L4 216 aa15.34■□□□□ 0.05
SHANK1-201ENST00000293441 MSRB3Q8IXL7 192 aa15.34■□□□□ 0.05
SHANK1-201ENST00000293441 ZNF629Q9UEG4 869 aaPredicted RBP15.34■□□□□ 0.05
SHANK1-201ENST00000293441 DUS4LO95620 317 aaKnown RBP15.34■□□□□ 0.05
SHANK1-201ENST00000293441 WNT1P04628 370 aa15.34■□□□□ 0.05
SHANK1-201ENST00000293441 TRAT1Q6PIZ9 186 aa15.34■□□□□ 0.05
SHANK1-201ENST00000293441 HRKO00198 91 aa15.34■□□□□ 0.05
SHANK1-201ENST00000293441 OPN1MWP04001 364 aa15.34■□□□□ 0.05
SHANK1-201ENST00000293441 TRAPPC2P0DI81 140 aa15.34■□□□□ 0.05
SHANK1-201ENST00000293441 TRAPPC2BP0DI82 140 aa15.34■□□□□ 0.05
SHANK1-201ENST00000293441 OPN1MW2P0DN77 364 aa15.34■□□□□ 0.05
SHANK1-201ENST00000293441 OPN1MW3P0DN78 364 aa15.34■□□□□ 0.05
SHANK1-201ENST00000293441 CCL3P10147 92 aa15.34■□□□□ 0.05
SHANK1-201ENST00000293441 THSD4Q6ZMP0 1018 aa15.34■□□□□ 0.05
SHANK1-201ENST00000293441 ZFPL1O95159 310 aa15.34■□□□□ 0.05
SHANK1-201ENST00000293441 OR6X1Q8NH79 312 aa15.34■□□□□ 0.05
SHANK1-201ENST00000293441 TRPM6Q9BX84 2022 aa15.34■□□□□ 0.05
SHANK1-201ENST00000293441 CD226Q15762 336 aa15.34■□□□□ 0.05
SHANK1-201ENST00000293441 OR8B3Q8NGG8 313 aa15.34■□□□□ 0.05
SHANK1-201ENST00000293441 OR8B2Q96RD0 313 aa15.34■□□□□ 0.05
SHANK1-201ENST00000293441 IL36GQ9NZH8 169 aa15.34■□□□□ 0.05
SHANK1-201ENST00000293441 UBR3Q6ZT12 1888 aa15.34■□□□□ 0.05
SHANK1-201ENST00000293441 TUBAL3A6NHL2 446 aa15.33■□□□□ 0.05
SHANK1-201ENST00000293441 SSX7Q7RTT5 188 aa15.33■□□□□ 0.05
SHANK1-201ENST00000293441 EXOGQ9Y2C4 368 aaKnown RBP15.33■□□□□ 0.05
SHANK1-201ENST00000293441 G3V3Q6 166 aa15.33■□□□□ 0.05
SHANK1-201ENST00000293441 NHLRC1Q6VVB1 395 aa15.33■□□□□ 0.05
SHANK1-201ENST00000293441 LINC00299Q6ZSB3 139 aa15.33■□□□□ 0.05
SHANK1-201ENST00000293441 C12orf10Q9HB07 376 aa15.33■□□□□ 0.05
SHANK1-201ENST00000293441 ARRDC1Q8N5I2 433 aa15.33■□□□□ 0.04
SHANK1-201ENST00000293441 WDR31Q8NA23 367 aa15.33■□□□□ 0.04
SHANK1-201ENST00000293441 OR8B12Q8NGG6 310 aa15.33■□□□□ 0.04
SHANK1-201ENST00000293441 CNTD2Q9H8S5 307 aa15.33■□□□□ 0.04
SHANK1-201ENST00000293441 STRCP1A6NGW2 1772 aa15.33■□□□□ 0.04
SHANK1-201ENST00000293441 TRAV38-1A0A0B4J264 116 aa15.33■□□□□ 0.04
SHANK1-201ENST00000293441 DEFA6Q01524 100 aa15.33■□□□□ 0.04
SHANK1-201ENST00000293441 ZNF275Q9NSD4 429 aaPredicted RBP15.33■□□□□ 0.04
SHANK1-201ENST00000293441 PLPP2O43688 288 aa15.33■□□□□ 0.04
SHANK1-201ENST00000293441 CD37P11049 281 aa15.33■□□□□ 0.04
SHANK1-201ENST00000293441 OR3A1P47881 315 aa15.33■□□□□ 0.04
SHANK1-201ENST00000293441 TAGLNQ01995 201 aaKnown RBP15.33■□□□□ 0.04
SHANK1-201ENST00000293441 SRRQ9GZT4 340 aa15.33■□□□□ 0.04
SHANK1-201ENST00000293441 ARL2-SNX15V9GYD0 113 aa15.33■□□□□ 0.04
SHANK1-201ENST00000293441 FGF2P09038 288 aa15.33■□□□□ 0.04
SHANK1-201ENST00000293441 FBP1P09467 338 aa15.33■□□□□ 0.04
SHANK1-201ENST00000293441 CEACAM3P40198 252 aa15.33■□□□□ 0.04
SHANK1-201ENST00000293441 SELENOPP49908 381 aa15.33■□□□□ 0.04
SHANK1-201ENST00000293441 ST8SIA2Q92186 375 aa15.33■□□□□ 0.04
SHANK1-201ENST00000293441 GSX2Q9BZM3 304 aa15.33■□□□□ 0.04
SHANK1-201ENST00000293441 KCNJ3P48549 501 aa15.32■□□□□ 0.04
SHANK1-201ENST00000293441 NCR3LG1Q68D85 454 aa15.32■□□□□ 0.04
SHANK1-201ENST00000293441 SKP2Q13309 424 aa15.32■□□□□ 0.04
SHANK1-201ENST00000293441 FFAR4Q5NUL3 377 aa15.32■□□□□ 0.04
SHANK1-201ENST00000293441 BAP18Q8IXM2 172 aa15.32■□□□□ 0.04
SHANK1-201ENST00000293441 ZNF385DQ9H6B1 395 aa15.32■□□□□ 0.04
SHANK1-201ENST00000293441 HOXC8P31273 242 aa15.32■□□□□ 0.04
SHANK1-201ENST00000293441 ABHD3Q8WU67 409 aa15.32■□□□□ 0.04
SHANK1-201ENST00000293441 CD82P27701 267 aa15.32■□□□□ 0.04
SHANK1-201ENST00000293441 KIR2DS2P43631 304 aa15.32■□□□□ 0.04
SHANK1-201ENST00000293441 CCL21O00585 134 aa15.32■□□□□ 0.04
SHANK1-201ENST00000293441 ERVFC1-1P60608 527 aa15.32■□□□□ 0.04
SHANK1-201ENST00000293441 OR2M7Q8NG81 312 aa15.32■□□□□ 0.04
SHANK1-201ENST00000293441 OR4F17Q8NGA8 305 aa15.32■□□□□ 0.04
SHANK1-201ENST00000293441 PLSCR3Q9NRY6 295 aa15.32■□□□□ 0.04
SHANK1-201ENST00000293441 RNF24Q9Y225 148 aa15.32■□□□□ 0.04
SHANK1-201ENST00000293441 FOCADQ5VW36 1801 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 C3orf85A0A1B0GTC6 90 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 MASP2O00187 686 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 CDC42EP2O14613 210 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 TMEM127O75204 238 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 SLC37A1P57057 533 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 C1QL3Q5VWW1 255 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 C2CD4CQ8TF44 421 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 KNL1Q8NG31 2342 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 FOXO1Q12778 655 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 ETFRF1Q6IPR1 90 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 OR5M8Q8NGP6 311 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 BLNKQ8WV28 456 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 OR6C3Q9NZP0 311 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 NAGKQ9UJ70 344 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 SCN3AQ9NY46 2000 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 LRRTM1Q86UE6 522 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 MOGAT3Q86VF5 341 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 SAP30LQ9HAJ7 183 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 FABP9Q0Z7S8 132 aa15.31■□□□□ 0.04
SHANK1-201ENST00000293441 VSTM2LQ96N03 204 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms