RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Olfr199F6ZUS0 308 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 P01635 115 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 JPT1P97825 154 aaKnown RBP14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Cass4Q08EC4 804 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 MybphlQ5FW53 355 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Rcor3Q6PGA0 451 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr1140Q7TR39 311 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Vmn1r230Q8R2A2 316 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 FuomQ8R2K1 153 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Thoc3Q8VE80 351 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr860Q8VFF7 317 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 St3gal6Q8VIB3 329 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Ankrd22Q9D3J5 191 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Defb5Q9EPV9 64 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Hnf4gQ9WUU6 408 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Zfp988F6VKC7 633 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 H2-M1F7CXU4 344 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr895L7N210 316 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Tcstv3O70518 169 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 HexbP20060 536 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Gpr83P30731 423 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 G6pd2P97324 513 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 UevldQ3U1V6 471 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr32Q7TQZ0 308 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Paqr7Q80ZE4 345 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Q9CRC3 126 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr1157A2AVC4 312 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Phlda2O08969 144 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Gm773Q3TML4 206 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Ankrd53Q3V0J4 497 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Slc25a41Q8BVN7 312 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 EogtQ8BYW9 527 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr473Q8VG44 310 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 CsQ9CZU6 464 aaKnown RBP14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Htr6Q9R1C8 440 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Slc22a5Q9Z0E8 557 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Dock1Q8BUR4 1865 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr1066A2AK62 313 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Susd1E9Q3H4 752 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Ppt2O35448 302 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 P01800 113 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Il5raP21183 415 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Fam173aQ501J2 229 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Fzd7Q61090 572 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr1086Q8VFL9 310 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Srxn1Q9D975 136 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Bpnt1Q9Z0S1 308 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Fbxw25F7C9P2 466 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Gm21863J3KMP8 111 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Ifna9P09235 190 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Tmem108Q8BHE4 574 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 A930004D18RikQ8C8W7 157 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Mic13Q8R404 119 aaKnown RBP14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr51Q8VGG9 307 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Masp2Q91WP0 685 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Ucn3Q924A4 164 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr887Q9EQA6 309 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 SclyQ9JLI6 432 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 SrpxQ9R0M3 464 aa14.01□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Prr23a1G3UW32 258 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Vmn1r67G5E8C1 305 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Prdx6O08709 224 aaKnown RBP14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 AF067061O70616 171 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Tnfsf10P50592 291 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Nxph1Q61200 271 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Adat3Q6PAT0 349 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 CmblQ8R1G2 245 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Reep6Q9JM62 201 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Tnfsf14Q9QYH9 239 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr155Q9QZ22 319 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Usp36B1AQJ2 1098 aaKnown RBP14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Smpd5D6MZJ6 483 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Gm9125P0DMR6 365 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Tas2r116Q7M713 305 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 9230110F15RikQ9D262 117 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 NosipQ9D6T0 301 aaKnown RBP14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Chrm2Q9ERZ4 466 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Cdc34bA0A140T8I4 237 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr221B2RVX8 311 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Ptx3P48759 381 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Il17rcQ8K4C2 698 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Calhm5Q8R100 309 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Ifi27l2bQ8VC49 283 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr796Q8VGJ1 310 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Sytl3Q99N48 607 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Tmem216Q9CQC4 141 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Q9CRW3 126 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Tmem225Q9D9S2 230 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Opn4Q9QXZ9 521 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Gm21970F6XX07 295 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 RradO88667 308 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Grb2Q60631 217 aaKnown RBP14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Tmem198bQ8CFU0 350 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Vmn1r42Q8VBS7 329 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr486Q8VFD0 314 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Tmem175Q9CXY1 499 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Dusp3Q9D7X3 185 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Sdf2Q9DCT5 211 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Tas2r105Q9JKT4 300 aa14□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Decr2Q9WV68 292 aa14□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 66.5 ms