RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Rbm39Q8VH51 530 aaKnown RBP11.96□□□□□ -0.49
Nup88-201ENSMUST00000035283 Nudt21Q9CQF3 227 aaKnown RBP11.96□□□□□ -0.49
Nup88-201ENSMUST00000035283 Stard5Q9EPQ7 213 aa11.96□□□□□ -0.49
Nup88-201ENSMUST00000035283 Gal3st1Q9JHE4 423 aa11.96□□□□□ -0.49
Nup88-201ENSMUST00000035283 P2rx4Q9JJX6 388 aa11.96□□□□□ -0.49
Nup88-201ENSMUST00000035283 Ccdc166S4R181 449 aa11.96□□□□□ -0.49
Nup88-201ENSMUST00000035283 Wdr90Q6ZPG2 1874 aa11.96□□□□□ -0.49
Nup88-201ENSMUST00000035283 2010106E10RikA2ANY3 279 aa11.96□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr1158A2BHP7 313 aa11.96□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gm8159E9Q0R1 267 aa11.96□□□□□ -0.5
Nup88-201ENSMUST00000035283 Klk1b3P00756 261 aa11.96□□□□□ -0.5
Nup88-201ENSMUST00000035283 Tnfsf9P41274 309 aa11.96□□□□□ -0.5
Nup88-201ENSMUST00000035283 RoraP51448 523 aa11.96□□□□□ -0.5
Nup88-201ENSMUST00000035283 Kcng3P59053 433 aa11.96□□□□□ -0.5
Nup88-201ENSMUST00000035283 Ubqln3Q8C5U9 658 aa11.96□□□□□ -0.5
Nup88-201ENSMUST00000035283 Tmem230Q8CIB6 120 aa11.96□□□□□ -0.5
Nup88-201ENSMUST00000035283 Slc7a12Q8VIE6 465 aa11.96□□□□□ -0.5
Nup88-201ENSMUST00000035283 Cep41Q99NF3 373 aa11.96□□□□□ -0.5
Nup88-201ENSMUST00000035283 Rtn4rQ99PI8 473 aa11.96□□□□□ -0.5
Nup88-201ENSMUST00000035283 Rep15Q9D7T1 230 aa11.96□□□□□ -0.5
Nup88-201ENSMUST00000035283 Med29Q9DB91 199 aa11.96□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr948Q9EQ95 321 aa11.96□□□□□ -0.5
Nup88-201ENSMUST00000035283 March7Q9WV66 693 aa11.96□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gm29276A0A087WNW5 222 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gm20792A0A087WRF5 222 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gm28490A0A087WRT9 222 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gm21996A0A087WSS9 222 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Fbxw27A0A1D5RLF0 466 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Kiaa1324A2AFS3 1009 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Ccdc9bA3KGF9 545 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gm21103E9Q2Q1 267 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr623E9Q382 317 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gm4181E9Q7X3 184 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Emg1O35130 244 aaKnown RBP11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 DffbO54788 344 aaKnown RBP11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gpld1O70362 837 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Rab6aP35279 208 aaKnown RBP11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Id4P41139 161 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Kcnj3P63250 501 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr733Q14AK5 308 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Rhox4fQ2MDF8 205 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Rhox4cQ2MDG1 205 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Taar8cQ5QD05 344 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Ptpmt1Q66GT5 193 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Cfap161Q6P8Y0 303 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr1162Q7TR28 314 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr885Q7TRE0 309 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 GgnQ80WJ1 673 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Negr1Q80Z24 348 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Mrpl48Q8JZS9 211 aaKnown RBP11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Commd1Q8K4M5 188 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr1512Q8VF72 313 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr1086Q8VFL9 310 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Prss42Q8VIF2 335 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Cst14Q8VII3 130 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 HaghQ99KB8 309 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Rhox4aQ9D3I8 205 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Dazap2Q9DCP9 168 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gm21488A0A087WR99 222 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gm9047B9EJX3 177 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr613E9PYB4 317 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Avpr2O88721 371 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 HckP08103 524 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 AhsgP29699 345 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Meox2P32443 303 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 P2ry2P35383 373 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Ypel5P62700 121 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr988Q7TRA1 309 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr787Q7TRI1 312 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Slc35d3Q8BGF8 422 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Srrm4Q8BKA3 608 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Elfn1Q8C8T7 828 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Vmn1r21Q8R2C6 297 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 C8gQ8VCG4 202 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr135Q8VEY4 312 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Atp23Q9CWQ3 201 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Tmem30cQ9D4D7 342 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Arl5bQ9D4P0 179 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Bola1Q9D8S9 137 aaKnown RBP11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 LitafQ9JLJ0 161 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Plek2Q9WV52 353 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 SnapinQ9Z266 136 aa11.95□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr750E9Q0Z1 331 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 AdmP97297 184 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr9Q60885 312 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Zfp933Q6PEE4 468 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Tmem144Q8VEH0 348 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr279Q8VFD8 310 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 SdhbQ9CQA3 282 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Emc6Q9CQW0 110 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Sec11cQ9D8V7 192 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Rrp8Q9DB85 457 aaKnown RBP11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Ndufa9Q9DC69 377 aaKnown RBP11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Zfand6Q9DCH6 223 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Nat8Q9JIY7 227 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Ssna1Q9JJ94 119 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Riox1Q9JJF3 603 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Slc30a7Q9JKN1 378 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Nubp2Q9R061 275 aa11.94□□□□□ -0.5
Nup88-201ENSMUST00000035283 Lrp3E9Q1T6 790 aa11.94□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 63.6 ms