RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 SAMD5Q5TGI4 173 aa14.48□□□□□ -0.09
SHKBP1-227ENST00000602011 TMEM200BQ69YZ2 307 aa14.48□□□□□ -0.09
SHKBP1-227ENST00000602011 TRPM8Q7Z2W7 1104 aa14.48□□□□□ -0.09
SHKBP1-227ENST00000602011 OR4S1Q8NGB4 309 aa14.48□□□□□ -0.09
SHKBP1-227ENST00000602011 DNAJC9Q8WXX5 260 aa14.48□□□□□ -0.09
SHKBP1-227ENST00000602011 AJUBAQ96IF1 538 aa14.48□□□□□ -0.09
SHKBP1-227ENST00000602011 MNTQ99583 582 aa14.48□□□□□ -0.09
SHKBP1-227ENST00000602011 PBOV1Q9GZY1 135 aa14.48□□□□□ -0.09
SHKBP1-227ENST00000602011 C1orf21Q9H246 121 aa14.48□□□□□ -0.09
SHKBP1-227ENST00000602011 FAM206AQ9NX38 181 aa14.48□□□□□ -0.09
SHKBP1-227ENST00000602011 AQP12BA6NM10 295 aa14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 DHRS7CA6NNS2 312 aa14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 DLGAP1O14490 977 aa14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 DHRS3O75911 302 aa14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 RBP4P02753 201 aa14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 PGA5P0DJD9 388 aa14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 CALB2P22676 271 aa14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 RIDAP52758 137 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 LY6EQ16553 131 aa14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 CEP78Q5JTW2 689 aa14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 PLCXD3Q63HM9 321 aa14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 COMMD2Q86X83 199 aa14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 AQP12AQ8IXF9 295 aa14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 MKXQ8IYA7 352 aa14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 KLHDC1Q8N7A1 406 aa14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 OR2T27Q8NH04 317 aa14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 FOXRED1Q96CU9 486 aaPredicted RBP14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 MALSU1Q96EH3 234 aa14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 TEAD3Q99594 435 aa14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 MOB1AQ9H8S9 216 aa14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 GPR84Q9NQS5 396 aa14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 C19orf12Q9NSK7 152 aa14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 NUFIP1Q9UHK0 495 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 PIGLQ9Y2B2 252 aa14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 TBL2Q9Y4P3 447 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 TET2Q6N021 2002 aaPredicted RBP14.47□□□□□ -0.09
SHKBP1-227ENST00000602011 FAM90A8PA6NJQ4 464 aa14.46□□□□□ -0.09
SHKBP1-227ENST00000602011 J3QT63 122 aa14.46□□□□□ -0.09
SHKBP1-227ENST00000602011 SLC2A5P22732 501 aa14.46□□□□□ -0.09
SHKBP1-227ENST00000602011 CLVS2Q5SYC1 327 aa14.46□□□□□ -0.09
SHKBP1-227ENST00000602011 C11orf42Q8N5U0 333 aa14.46□□□□□ -0.09
SHKBP1-227ENST00000602011 OR13D1Q8NGV5 346 aa14.46□□□□□ -0.09
SHKBP1-227ENST00000602011 OR8B4Q96RC9 309 aa14.46□□□□□ -0.09
SHKBP1-227ENST00000602011 PRRG3Q9BZD7 231 aa14.46□□□□□ -0.09
SHKBP1-227ENST00000602011 SLC25A19Q9HC21 320 aa14.46□□□□□ -0.09
SHKBP1-227ENST00000602011 NOTCH3Q9UM47 2321 aa14.46□□□□□ -0.1
SHKBP1-227ENST00000602011 NBEAL2Q6ZNJ1 2754 aa14.45□□□□□ -0.1
SHKBP1-227ENST00000602011 HAAOP46952 286 aa14.45□□□□□ -0.1
SHKBP1-227ENST00000602011 APOFQ13790 326 aa14.45□□□□□ -0.1
SHKBP1-227ENST00000602011 SNAPC1Q16533 368 aa14.45□□□□□ -0.1
SHKBP1-227ENST00000602011 TMEM42Q69YG0 159 aa14.45□□□□□ -0.1
SHKBP1-227ENST00000602011 Q8N2B8 174 aa14.45□□□□□ -0.1
SHKBP1-227ENST00000602011 CD177Q8N6Q3 437 aa14.45□□□□□ -0.1
SHKBP1-227ENST00000602011 OR4F17Q8NGA8 305 aa14.45□□□□□ -0.1
SHKBP1-227ENST00000602011 OR51E1Q8TCB6 317 aa14.45□□□□□ -0.1
SHKBP1-227ENST00000602011 PIFOQ8TCI5 191 aa14.45□□□□□ -0.1
SHKBP1-227ENST00000602011 C17orf50Q8WW18 174 aa14.45□□□□□ -0.1
SHKBP1-227ENST00000602011 RORBQ92753 470 aa14.45□□□□□ -0.1
SHKBP1-227ENST00000602011 NRBF2Q96F24 287 aa14.45□□□□□ -0.1
SHKBP1-227ENST00000602011 OR4F4Q96R69 305 aa14.45□□□□□ -0.1
SHKBP1-227ENST00000602011 ELL3Q9HB65 397 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-227ENST00000602011 ABCB10Q9NRK6 738 aa14.45□□□□□ -0.1
SHKBP1-227ENST00000602011 DNAJB9Q9UBS3 223 aa14.45□□□□□ -0.1
SHKBP1-227ENST00000602011 KLHDC2Q9Y2U9 406 aa14.45□□□□□ -0.1
SHKBP1-227ENST00000602011 SIGLEC9Q9Y336 463 aa14.45□□□□□ -0.1
SHKBP1-227ENST00000602011 C17orf98A8MV24 154 aa14.44□□□□□ -0.1
SHKBP1-227ENST00000602011 ALX3O95076 343 aa14.44□□□□□ -0.1
SHKBP1-227ENST00000602011 NXPH2O95156 264 aa14.44□□□□□ -0.1
SHKBP1-227ENST00000602011 TK1P04183 234 aa14.44□□□□□ -0.1
SHKBP1-227ENST00000602011 ALDOBP05062 364 aa14.44□□□□□ -0.1
SHKBP1-227ENST00000602011 MPZP25189 248 aa14.44□□□□□ -0.1
SHKBP1-227ENST00000602011 Q6ZPA2 131 aa14.44□□□□□ -0.1
SHKBP1-227ENST00000602011 NDUFA11Q86Y39 141 aa14.44□□□□□ -0.1
SHKBP1-227ENST00000602011 ADGRG5Q8IZF4 528 aa14.44□□□□□ -0.1
SHKBP1-227ENST00000602011 RPS4Y2Q8TD47 263 aa14.44□□□□□ -0.1
SHKBP1-227ENST00000602011 NRIP2Q9BQI9 281 aa14.44□□□□□ -0.1
SHKBP1-227ENST00000602011 PRSS22Q9GZN4 317 aa14.44□□□□□ -0.1
SHKBP1-227ENST00000602011 HES4Q9HCC6 221 aa14.44□□□□□ -0.1
SHKBP1-227ENST00000602011 FOXJ3Q9UPW0 622 aa14.44□□□□□ -0.1
SHKBP1-227ENST00000602011 K7N7A8 449 aa14.43□□□□□ -0.1
SHKBP1-227ENST00000602011 FBXO24O75426 580 aa14.43□□□□□ -0.1
SHKBP1-227ENST00000602011 TFF1P04155 84 aa14.43□□□□□ -0.1
SHKBP1-227ENST00000602011 CHRM2P08172 466 aa14.43□□□□□ -0.1
SHKBP1-227ENST00000602011 VSIG10L2P0DP72 767 aa14.43□□□□□ -0.1
SHKBP1-227ENST00000602011 DYNLT3P51808 116 aa14.43□□□□□ -0.1
SHKBP1-227ENST00000602011 C11orf44Q8N8P7 122 aa14.43□□□□□ -0.1
SHKBP1-227ENST00000602011 CCDC54Q8NEL0 328 aa14.43□□□□□ -0.1
SHKBP1-227ENST00000602011 OR11H6Q8NGC7 330 aa14.43□□□□□ -0.1
SHKBP1-227ENST00000602011 CANT1Q8WVQ1 401 aa14.43□□□□□ -0.1
SHKBP1-227ENST00000602011 PKIBQ9C010 78 aa14.43□□□□□ -0.1
SHKBP1-227ENST00000602011 SEBOXQ9HB31 216 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-227ENST00000602011 H2AFY2Q9P0M6 372 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-227ENST00000602011 TCF19Q9Y242 345 aa14.43□□□□□ -0.1
SHKBP1-227ENST00000602011 PQLC2LA1A4F0 135 aa14.42□□□□□ -0.1
SHKBP1-227ENST00000602011 PEX14O75381 377 aa14.42□□□□□ -0.1
SHKBP1-227ENST00000602011 HCCSP53701 268 aa14.42□□□□□ -0.1
SHKBP1-227ENST00000602011 MEF2CQ06413 473 aaPredicted RBP14.42□□□□□ -0.1
SHKBP1-227ENST00000602011 IL24Q13007 206 aa14.42□□□□□ -0.1
SHKBP1-227ENST00000602011 CNN3Q15417 329 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-227ENST00000602011 FAM189A2Q15884 450 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms