RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 FAM76BQ5HYJ3 339 aa17.73■□□□□ 0.43
PNKP-203ENST00000593946 Q6ZR03 302 aa17.73■□□□□ 0.43
PNKP-203ENST00000593946 SLC25A26Q70HW3 274 aa17.73■□□□□ 0.43
PNKP-203ENST00000593946 LRP11Q86VZ4 500 aa17.73■□□□□ 0.43
PNKP-203ENST00000593946 ZNF573Q86YE8 665 aa17.73■□□□□ 0.43
PNKP-203ENST00000593946 SAXO1Q8IYX7 474 aa17.73■□□□□ 0.43
PNKP-203ENST00000593946 FAM89BQ8N5H3 189 aa17.73■□□□□ 0.43
PNKP-203ENST00000593946 URM1Q9BTM9 101 aaKnown RBP17.73■□□□□ 0.43
PNKP-203ENST00000593946 ROS1P08922 2347 aa17.73■□□□□ 0.43
PNKP-203ENST00000593946 MLNRO43193 412 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 CHRM2P08172 466 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 PTHLHP12272 177 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 AGAP20933 346 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 VEGFCP49767 419 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 KLF3P57682 345 aaPredicted RBP17.72■□□□□ 0.43
PNKP-203ENST00000593946 SNTB1Q13884 538 aaKnown RBP17.72■□□□□ 0.43
PNKP-203ENST00000593946 OR8G1Q15617 311 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 DNM1P46Q6ZS02 220 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 SETD6Q8TBK2 473 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 TM2D1Q9BX74 207 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 OR51I2Q9H344 312 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 AUNIPQ9H7T9 357 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 WIPF3A6NGB9 483 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 B8ZZF3 427 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 H0YL77 283 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 DEFA1P59665 94 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 DEFA3P59666 94 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 NCMAPQ5T1S8 102 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 VHLLQ6RSH7 139 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 SLC22A25Q6T423 547 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 WDR86Q86TI4 376 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 TMEM200AQ86VY9 491 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 POC5Q8NA72 575 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 OR10R2Q8NGX6 335 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 LINC01560Q8TB33 94 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 CHPT1Q8WUD6 406 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 ITLN2Q8WWU7 325 aaPredicted RBP17.72■□□□□ 0.43
PNKP-203ENST00000593946 Q96M66 194 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 SELENOIQ9C0D9 397 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 OCEL1Q9H607 264 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 ESRP2Q9H6T0 727 aaKnown RBP17.72■□□□□ 0.43
PNKP-203ENST00000593946 DUSP13Q9UII6 198 aa17.72■□□□□ 0.43
PNKP-203ENST00000593946 CHD3Q12873 2000 aaKnown RBP17.71■□□□□ 0.43
PNKP-203ENST00000593946 ZG16O60844 167 aa17.71■□□□□ 0.43
PNKP-203ENST00000593946 HTR3BO95264 441 aa17.71■□□□□ 0.43
PNKP-203ENST00000593946 CSTBP04080 98 aaKnown RBP17.71■□□□□ 0.43
PNKP-203ENST00000593946 PRB1P04280 392 aa17.71■□□□□ 0.43
PNKP-203ENST00000593946 SFTPBP07988 381 aa17.71■□□□□ 0.43
PNKP-203ENST00000593946 CD3GP09693 182 aa17.71■□□□□ 0.43
PNKP-203ENST00000593946 GTF2F2P13984 249 aa17.71■□□□□ 0.43
PNKP-203ENST00000593946 MPZP25189 248 aa17.71■□□□□ 0.43
PNKP-203ENST00000593946 RNASE12Q5GAN4 147 aaKnown RBP17.71■□□□□ 0.43
PNKP-203ENST00000593946 HACD4Q5VWC8 232 aa17.71■□□□□ 0.43
PNKP-203ENST00000593946 ZNF808Q8N4W9 903 aaPredicted RBP17.71■□□□□ 0.43
PNKP-203ENST00000593946 C19orf18Q8NEA5 215 aa17.71■□□□□ 0.43
PNKP-203ENST00000593946 Q8NFD4 153 aa17.71■□□□□ 0.43
PNKP-203ENST00000593946 OR10AD1Q8NGE0 317 aa17.71■□□□□ 0.43
PNKP-203ENST00000593946 OR56B1Q8NGI3 324 aa17.71■□□□□ 0.43
PNKP-203ENST00000593946 OR13G1Q8NGZ3 307 aa17.71■□□□□ 0.43
PNKP-203ENST00000593946 OR52I2Q8NH67 350 aa17.71■□□□□ 0.43
PNKP-203ENST00000593946 PKIBQ9C010 78 aa17.71■□□□□ 0.43
PNKP-203ENST00000593946 CA10Q9NS85 328 aa17.71■□□□□ 0.43
PNKP-203ENST00000593946 MEIOCA2RUB1 952 aa17.7■□□□□ 0.42
PNKP-203ENST00000593946 LRP5LA4QPB2 252 aa17.7■□□□□ 0.42
PNKP-203ENST00000593946 ASAH1Q13510 395 aa17.7■□□□□ 0.42
PNKP-203ENST00000593946 HAGHLQ6PII5 290 aaPredicted RBP17.7■□□□□ 0.42
PNKP-203ENST00000593946 MKXQ8IYA7 352 aa17.7■□□□□ 0.42
PNKP-203ENST00000593946 OR51T1Q8NGJ9 327 aa17.7■□□□□ 0.42
PNKP-203ENST00000593946 FCAMRQ8WWV6 532 aa17.7■□□□□ 0.42
PNKP-203ENST00000593946 MRPS24Q96EL2 167 aaKnown RBP17.7■□□□□ 0.42
PNKP-203ENST00000593946 ZNF442Q9H7R0 627 aa17.7■□□□□ 0.42
PNKP-203ENST00000593946 MSL2Q9HCI7 577 aa17.7■□□□□ 0.42
PNKP-203ENST00000593946 PCDHB16Q9NRJ7 776 aa17.7■□□□□ 0.42
PNKP-203ENST00000593946 RBMX2Q9Y388 322 aaKnown RBP17.7■□□□□ 0.42
PNKP-203ENST00000593946 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.69■□□□□ 0.42
PNKP-203ENST00000593946 TMEM210A6NLX4 147 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 FOXI3A8MTJ6 420 aaPredicted RBP17.69■□□□□ 0.42
PNKP-203ENST00000593946 J3QT63 122 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 SOCS1O15524 211 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 SYNGR1O43759 233 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 CPT2P23786 658 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 IL24Q13007 206 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 OXA1LQ15070 435 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 ZNF260Q3ZCT1 412 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 AQP3Q92482 292 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 SLAMF9Q96A28 289 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 MRPL24Q96A35 216 aaKnown RBP17.69■□□□□ 0.42
PNKP-203ENST00000593946 PLPPR2Q96GM1 343 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 SYT3Q9BQG1 590 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 MRPL37Q9BZE1 423 aaKnown RBP17.69■□□□□ 0.42
PNKP-203ENST00000593946 MTCH1Q9NZJ7 389 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 TUBAL3A6NHL2 446 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 PLA2G10O15496 165 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 CLDN14O95500 239 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 CYB5AP00167 134 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 NPBWR2P48146 333 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 TMEM50BP56557 158 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 ZNF154Q13106 437 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 ELP2Q6IA86 826 aa17.69■□□□□ 0.42
PNKP-203ENST00000593946 ADAM5Q6NVV9 412 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms