RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 SEBOXQ9HB31 216 aaPredicted RBP6.94□□□□□ -1.3
SMAD4-215ENST00000592911 VNN3Q9NY84 501 aa6.94□□□□□ -1.3
SMAD4-215ENST00000592911 DNAJB9Q9UBS3 223 aa6.94□□□□□ -1.3
SMAD4-215ENST00000592911 SAMD4AQ9UPU9 718 aaKnown RBP6.94□□□□□ -1.3
SMAD4-215ENST00000592911 POLDIP2Q9Y2S7 368 aa6.94□□□□□ -1.3
SMAD4-215ENST00000592911 SIRT4Q9Y6E7 314 aaPredicted RBP6.94□□□□□ -1.3
SMAD4-215ENST00000592911 HUWE1Q7Z6Z7 4374 aaKnown RBP6.94□□□□□ -1.3
SMAD4-215ENST00000592911 TRBV4-1A0A0J9YWV2 114 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 DHRS12A0PJE2 317 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 OOSP1A8MZH6 123 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 ZNF593O00488 134 aaPredicted RBP6.93□□□□□ -1.3
SMAD4-215ENST00000592911 SERPINA1P01009 418 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 GSTP1P09211 210 aaKnown RBP6.93□□□□□ -1.3
SMAD4-215ENST00000592911 SPARCP09486 303 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 ZNF728P0DKX0 622 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 SLC2A1P11166 492 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 COX7A1P24310 79 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 GSSP48637 474 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 ZNF121P58317 390 aaPredicted RBP6.93□□□□□ -1.3
SMAD4-215ENST00000592911 RPL23AP62750 156 aaKnown RBP6.93□□□□□ -1.3
SMAD4-215ENST00000592911 SEC23BQ15437 767 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 NKAPLQ5M9Q1 402 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 C9orf66Q5T8R8 295 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 KCTD18Q6PI47 426 aaPredicted RBP6.93□□□□□ -1.3
SMAD4-215ENST00000592911 ETV3LQ6ZN32 361 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 ACP7Q6ZNF0 438 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 KCTD8Q6ZWB6 473 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 RTN4RL2Q86UN3 420 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 DYNAPQ8N1N2 210 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 OR2T27Q8NH04 317 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 CHPT1Q8WUD6 406 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 DYDC1Q8WWB3 177 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 AQP3Q92482 292 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 C7orf34Q96L11 122 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 RBM14Q96PK6 669 aaKnown RBP6.93□□□□□ -1.3
SMAD4-215ENST00000592911 OR5M11Q96RB7 305 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 NRIP2Q9BQI9 281 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 NMNAT2Q9BZQ4 307 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 CENPMQ9NSP4 180 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 CHCHD3Q9NX63 227 aaKnown RBP6.93□□□□□ -1.3
SMAD4-215ENST00000592911 IL20Q9NYY1 176 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 CDH10Q9Y6N8 788 aa6.93□□□□□ -1.3
SMAD4-215ENST00000592911 V9GYY5 206 aaPredicted RBP6.93□□□□□ -1.3
SMAD4-215ENST00000592911 A0A0U1RQV5 110 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 PSMB11A5LHX3 300 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 RFPL4AA6NLU0 287 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 ZNF850A8MQ14 1090 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 RFPL4AL1F8VTS6 287 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 K7N7A8 449 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 GSTA4O15217 222 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 TK1P04183 234 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 CHRM2P08172 466 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 LYL1P12980 280 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 ANOS1P23352 680 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 HTR1DP28221 377 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 PRDX2P32119 198 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 OPRL1P41146 370 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 INSL3P51460 131 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 EIF2B1Q14232 305 aaKnown RBP6.92□□□□□ -1.3
SMAD4-215ENST00000592911 TMEM95Q3KNT9 176 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 CCDC144NLQ6NUI1 221 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 ZNF573Q86YE8 665 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 ZNF596Q8TC21 504 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 GNPDA2Q8TDQ7 276 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 WDR89Q96FK6 387 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-215ENST00000592911 PGAM5Q96HS1 289 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 ZNF714Q96N38 554 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 ELL3Q9HB65 397 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-215ENST00000592911 HES4Q9HCC6 221 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 PCDHB16Q9NRJ7 776 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 FAM53CQ9NYF3 392 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.92□□□□□ -1.3
SMAD4-215ENST00000592911 SESN1Q9Y6P5 492 aa6.92□□□□□ -1.3
SMAD4-215ENST00000592911 CSMD3Q7Z407 3707 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 A0A0G2JND7 137 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 hADV38S2A0JD32 116 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 DHRS7CA6NNS2 312 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 ZNF732B4DXR9 585 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 J3QT63 122 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 EDF1O60869 148 aaKnown RBP6.91□□□□□ -1.3
SMAD4-215ENST00000592911 E2F6O75461 281 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 KRT36O76013 467 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 GADD45GO95257 159 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 IFNGP01579 166 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 CCL3L1P16619 93 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 ACKR3P25106 362 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 MPZP25189 248 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 PYCR1P32322 319 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 CEACAM3P40198 252 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 RPS27P42677 84 aaKnown RBP6.91□□□□□ -1.3
SMAD4-215ENST00000592911 RAB13P51153 203 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 GPM6AP51674 278 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 SLC35B1P78383 322 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 BDH1Q02338 343 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 LIPEQ05469 1076 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 SLC34A1Q06495 639 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 KLF10Q13118 480 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 ZNF273Q14593 569 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 KHDC1LQ5JSQ8 128 aa6.91□□□□□ -1.3
SMAD4-215ENST00000592911 OR52W1Q6IF63 320 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms