RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 OR11L1Q8NGX0 322 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 OR14K1Q8NGZ2 314 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 TSEN15Q8WW01 171 aaKnown RBP12.16□□□□□ -0.46
COMMD4-225ENST00000569245 TMEM106AQ96A25 262 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 ADAT1Q9BUB4 502 aaKnown RBP12.16□□□□□ -0.46
COMMD4-225ENST00000569245 PPIL3Q9H2H8 161 aaKnown RBP12.16□□□□□ -0.46
COMMD4-225ENST00000569245 OPA3Q9H6K4 179 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 RNF167Q9H6Y7 350 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 METTL17Q9H7H0 456 aaPredicted RBP12.16□□□□□ -0.46
COMMD4-225ENST00000569245 UFSP2Q9NUQ7 469 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 MRPL15Q9P015 296 aaKnown RBP12.16□□□□□ -0.46
COMMD4-225ENST00000569245 V9GYS6 101 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 DNHD1Q96M86 4753 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 COL6A5A8TX70 2615 aa12.15□□□□□ -0.46
COMMD4-225ENST00000569245 hCG_38984A0A1B0GV85 526 aa12.15□□□□□ -0.46
COMMD4-225ENST00000569245 ANKRD30BLA7E2S9 258 aa12.15□□□□□ -0.46
COMMD4-225ENST00000569245 GMDSO60547 372 aa12.15□□□□□ -0.46
COMMD4-225ENST00000569245 FOXH1O75593 365 aa12.15□□□□□ -0.46
COMMD4-225ENST00000569245 THBS2P35442 1172 aa12.15□□□□□ -0.46
COMMD4-225ENST00000569245 SOX2P48431 317 aa12.15□□□□□ -0.46
COMMD4-225ENST00000569245 FAM3AP98173 230 aa12.15□□□□□ -0.46
COMMD4-225ENST00000569245 MAB21L1Q13394 359 aa12.15□□□□□ -0.46
COMMD4-225ENST00000569245 HSD17B12Q53GQ0 312 aa12.15□□□□□ -0.46
COMMD4-225ENST00000569245 PRAMEF6Q5VXH4 476 aa12.15□□□□□ -0.46
COMMD4-225ENST00000569245 USP43Q70EL4 1123 aa12.15□□□□□ -0.46
COMMD4-225ENST00000569245 COMMD2Q86X83 199 aa12.15□□□□□ -0.46
COMMD4-225ENST00000569245 PARP16Q8N5Y8 322 aa12.15□□□□□ -0.46
COMMD4-225ENST00000569245 TEX29Q8N6K0 151 aa12.15□□□□□ -0.46
COMMD4-225ENST00000569245 CELF2-AS1Q8N7Q2 184 aa12.15□□□□□ -0.46
COMMD4-225ENST00000569245 OR56B2PQ8NGI1 322 aa12.15□□□□□ -0.46
COMMD4-225ENST00000569245 OR13C3Q8NGS6 347 aa12.15□□□□□ -0.46
COMMD4-225ENST00000569245 TMEM158Q8WZ71 300 aa12.15□□□□□ -0.46
COMMD4-225ENST00000569245 C10orf35Q96D05 121 aa12.15□□□□□ -0.46
COMMD4-225ENST00000569245 FAM71F1Q96KD3 344 aaPredicted RBP12.15□□□□□ -0.46
COMMD4-225ENST00000569245 PATZ1Q9HBE1 687 aaKnown RBP12.15□□□□□ -0.46
COMMD4-225ENST00000569245 NOX4Q9NPH5 578 aa12.15□□□□□ -0.46
COMMD4-225ENST00000569245 METRNQ9UJH8 293 aa12.15□□□□□ -0.46
COMMD4-225ENST00000569245 TRAV1-2A0A0B4J238 106 aa12.14□□□□□ -0.47
COMMD4-225ENST00000569245 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.14□□□□□ -0.47
COMMD4-225ENST00000569245 A0A1B0GWJ7 208 aa12.14□□□□□ -0.47
COMMD4-225ENST00000569245 GRPP07492 148 aa12.14□□□□□ -0.47
COMMD4-225ENST00000569245 CALRP27797 417 aaKnown RBP12.14□□□□□ -0.47
COMMD4-225ENST00000569245 TGFBR1P36897 503 aa12.14□□□□□ -0.47
COMMD4-225ENST00000569245 DDOSTP39656 456 aa12.14□□□□□ -0.47
COMMD4-225ENST00000569245 PMELP40967 661 aa12.14□□□□□ -0.47
COMMD4-225ENST00000569245 CD200P41217 278 aa12.14□□□□□ -0.47
COMMD4-225ENST00000569245 MTNR1BP49286 362 aa12.14□□□□□ -0.47
COMMD4-225ENST00000569245 MZT1Q08AG7 82 aa12.14□□□□□ -0.47
COMMD4-225ENST00000569245 SPCS2Q15005 226 aa12.14□□□□□ -0.47
COMMD4-225ENST00000569245 OR8B8Q15620 311 aa12.14□□□□□ -0.47
COMMD4-225ENST00000569245 FAM27D1Q5T7N8 215 aa12.14□□□□□ -0.47
COMMD4-225ENST00000569245 ZBTB37Q5TC79 503 aa12.14□□□□□ -0.47
COMMD4-225ENST00000569245 KRT74Q7RTS7 529 aa12.14□□□□□ -0.47
COMMD4-225ENST00000569245 OR8S1Q8NH09 359 aa12.14□□□□□ -0.47
COMMD4-225ENST00000569245 DVL3Q92997 716 aaPredicted RBP12.14□□□□□ -0.47
COMMD4-225ENST00000569245 ERGIC1Q969X5 290 aa12.14□□□□□ -0.47
COMMD4-225ENST00000569245 OCEL1Q9H607 264 aa12.14□□□□□ -0.47
COMMD4-225ENST00000569245 C7orf69Q9H7B7 122 aa12.14□□□□□ -0.47
COMMD4-225ENST00000569245 FN3KRPQ9HA64 309 aa12.14□□□□□ -0.47
COMMD4-225ENST00000569245 PPIAL4EA0A075B759 164 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 LOC105371242A0A075B767 164 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 A0A1W2PPK0 400 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 SHISA3A0PJX4 238 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 CEACAM18A8MTB9 384 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 PPIAL4DF5H284 164 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 H3BSH0 61 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 J3QLI3 93 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 IL1AP01583 271 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 PPIAL4FP0DN26 164 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 RPS2P15880 293 aaKnown RBP12.13□□□□□ -0.47
COMMD4-225ENST00000569245 SRMP19623 302 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 FSTP19883 344 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 GATA3P23771 443 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 MYL9P24844 172 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 ZFP36P26651 326 aaKnown RBP12.13□□□□□ -0.47
COMMD4-225ENST00000569245 GATA4P43694 442 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 MAP2K3P46734 347 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 SERPINB10P48595 397 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 GSK3AP49840 483 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 SRSF2Q01130 221 aaKnown RBP12.13□□□□□ -0.47
COMMD4-225ENST00000569245 RIPPLY1Q0D2K3 151 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 SCGB2A2Q13296 93 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 MPPED2Q15777 294 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 ZNF181Q2M3W8 571 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 ESCO2Q56NI9 601 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 FAM201AQ5SY85 155 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 TPRA1Q86W33 373 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 SERPINA12Q8IW75 414 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 BOLLQ8N9W6 283 aaKnown RBP12.13□□□□□ -0.47
COMMD4-225ENST00000569245 SPERTQ8NA61 448 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 SEMA6DQ8NFY4 1073 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 NDNFQ8TB73 568 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 FGGYQ96C11 551 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 ADAT3Q96EY9 351 aaPredicted RBP12.13□□□□□ -0.47
COMMD4-225ENST00000569245 DCSTAMPQ9H295 470 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 TMEM165Q9HC07 324 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 SNTG1Q9NSN8 517 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 C14orf119Q9NWQ9 140 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 FOXJ3Q9UPW0 622 aa12.13□□□□□ -0.47
COMMD4-225ENST00000569245 PPIAL4AQ9Y536 164 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms