RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 H3BSH0 61 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 ATP8B1O43520 1251 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 OPN1MWP04001 364 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 HMGN1P05114 100 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 PGA5P0DJD9 388 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 OPN1MW2P0DN77 364 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 OPN1MW3P0DN78 364 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 VSIG10L2P0DP72 767 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 PIPP12273 146 aaPredicted RBP9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 EPHA2P29317 976 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 PRDX2P32119 198 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 DLX6P56179 175 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 RPL31P62899 125 aaKnown RBP9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 RIPPLY1Q0D2K3 151 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 SNCBQ16143 134 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 SLC35D3Q5M8T2 416 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 SAMD5Q5TGI4 173 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 PLCXD3Q63HM9 321 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 Q6ZPA2 131 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 COMMD2Q86X83 199 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 ANGPTL5Q86XS5 388 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 CALHM1Q8IU99 346 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 ARHGAP24Q8N264 748 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 POC1AQ8NBT0 407 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 OR5D13Q8NGL4 314 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 OR2T27Q8NH04 317 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 ZNF671Q8TAW3 534 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 ASB9Q96DX5 294 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 OR8B4Q96RC9 309 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 THTPAQ9BU02 230 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 YIPF3Q9GZM5 350 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 ZNF702PQ9H963 129 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 SERTAD4Q9NUC0 356 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 TRBV23-1A0A0A0MS06 115 aa9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 FAM90A8PA6NJQ4 464 aa9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 OR5B21A6NL26 309 aa9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 ADARB2-AS1A8MUL3 147 aa9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 GNGT2O14610 69 aa9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 PRKYO43930 277 aa9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 NRASP01111 189 aa9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 CD28P10747 220 aa9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 HAAOP46952 286 aa9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 DAPP51397 102 aa9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 MNAT1P51948 309 aa9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 BLMHQ13867 455 aa9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 SNAPC1Q16533 368 aa9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 NSUN5P1Q3KNT7 163 aa9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 OXLD1Q5BKU9 147 aa9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 Q6ZTK2 550 aa9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 TMEM219Q86XT9 240 aa9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 ZNF679Q8IYX0 411 aa9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 OR5K1Q8NHB7 308 aa9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 LRGUKQ96M69 825 aa9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 NKX3-1Q99801 234 aaPredicted RBP9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 SLC25A19Q9HC21 320 aa9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 OR14J1Q9UGF5 321 aa9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 NUFIP1Q9UHK0 495 aaKnown RBP9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 SLC22A13Q9Y226 551 aa9.34□□□□□ -0.91
PRPF40B-212ENST00000551111 PQLC2LA1A4F0 135 aa9.33□□□□□ -0.92
PRPF40B-212ENST00000551111 ACOD1A6NK06 481 aa9.33□□□□□ -0.92
PRPF40B-212ENST00000551111 J3QT63 122 aa9.33□□□□□ -0.92
PRPF40B-212ENST00000551111 MITFO75030 526 aaPredicted RBP9.33□□□□□ -0.92
PRPF40B-212ENST00000551111 INMTO95050 263 aa9.33□□□□□ -0.92
PRPF40B-212ENST00000551111 CALB2P22676 271 aa9.33□□□□□ -0.92
PRPF40B-212ENST00000551111 ROM1Q03395 351 aa9.33□□□□□ -0.92
PRPF40B-212ENST00000551111 FAM189A2Q15884 450 aa9.33□□□□□ -0.92
PRPF40B-212ENST00000551111 KPRPQ5T749 579 aaPredicted RBP9.33□□□□□ -0.92
PRPF40B-212ENST00000551111 TMEM42Q69YG0 159 aa9.33□□□□□ -0.92
PRPF40B-212ENST00000551111 KCTD18Q6PI47 426 aaPredicted RBP9.33□□□□□ -0.92
PRPF40B-212ENST00000551111 ASRGL1Q7L266 308 aa9.33□□□□□ -0.92
PRPF40B-212ENST00000551111 SSX6Q7RTT6 188 aa9.33□□□□□ -0.92
PRPF40B-212ENST00000551111 TCF23Q7RTU1 214 aa9.33□□□□□ -0.92
PRPF40B-212ENST00000551111 PAPD5Q8NDF8 572 aaKnown RBP9.33□□□□□ -0.92
PRPF40B-212ENST00000551111 OR4C13Q8NGP0 309 aa9.33□□□□□ -0.92
PRPF40B-212ENST00000551111 OR14K1Q8NGZ2 314 aa9.33□□□□□ -0.92
PRPF40B-212ENST00000551111 WIPF2Q8TF74 440 aaPredicted RBP9.33□□□□□ -0.92
PRPF40B-212ENST00000551111 NRIP2Q9BQI9 281 aa9.33□□□□□ -0.92
PRPF40B-212ENST00000551111 MMP28Q9H239 520 aa9.33□□□□□ -0.92
PRPF40B-212ENST00000551111 HES4Q9HCC6 221 aa9.33□□□□□ -0.92
PRPF40B-212ENST00000551111 RASL12Q9NYN1 266 aa9.33□□□□□ -0.92
PRPF40B-212ENST00000551111 GTF2A1LQ9UNN4 478 aa9.33□□□□□ -0.92
PRPF40B-212ENST00000551111 COL7A1Q02388 2944 aa9.32□□□□□ -0.92
PRPF40B-212ENST00000551111 IGKV1-27A0A075B6S5 117 aa9.32□□□□□ -0.92
PRPF40B-212ENST00000551111 GSC2O15499 205 aa9.32□□□□□ -0.92
PRPF40B-212ENST00000551111 NOS1APO75052 506 aaPredicted RBP9.32□□□□□ -0.92
PRPF40B-212ENST00000551111 FKBP6O75344 327 aa9.32□□□□□ -0.92
PRPF40B-212ENST00000551111 E2F6O75461 281 aa9.32□□□□□ -0.92
PRPF40B-212ENST00000551111 DHRS3O75911 302 aa9.32□□□□□ -0.92
PRPF40B-212ENST00000551111 NXPH2O95156 264 aa9.32□□□□□ -0.92
PRPF40B-212ENST00000551111 TK1P04183 234 aa9.32□□□□□ -0.92
PRPF40B-212ENST00000551111 RIDAP52758 137 aaKnown RBP9.32□□□□□ -0.92
PRPF40B-212ENST00000551111 CRISP1P54107 249 aa9.32□□□□□ -0.92
PRPF40B-212ENST00000551111 ERVK11-1P61568 191 aa9.32□□□□□ -0.92
PRPF40B-212ENST00000551111 CBX1P83916 185 aa9.32□□□□□ -0.92
PRPF40B-212ENST00000551111 COL10A1Q03692 680 aa9.32□□□□□ -0.92
PRPF40B-212ENST00000551111 PTGES3Q15185 160 aaKnown RBP9.32□□□□□ -0.92
PRPF40B-212ENST00000551111 ODF4Q2M2E3 257 aa9.32□□□□□ -0.92
PRPF40B-212ENST00000551111 SMIM21Q3B7S5 101 aa9.32□□□□□ -0.92
PRPF40B-212ENST00000551111 TMEM95Q3KNT9 176 aa9.32□□□□□ -0.92
PRPF40B-212ENST00000551111 FBLN7Q53RD9 439 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms