RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 TPOP07202 933 aa16.48■□□□□ 0.23
BRF1-215ENST00000549655 CELA3BP08861 270 aa16.48■□□□□ 0.23
BRF1-215ENST00000549655 TSC22D1Q15714 1073 aa16.48■□□□□ 0.23
BRF1-215ENST00000549655 C4orf46Q504U0 113 aa16.48■□□□□ 0.23
BRF1-215ENST00000549655 NKAPLQ5M9Q1 402 aa16.48■□□□□ 0.23
BRF1-215ENST00000549655 ATPAF1Q5TC12 328 aaPredicted RBP16.48■□□□□ 0.23
BRF1-215ENST00000549655 SIGIRRQ6IA17 410 aa16.48■□□□□ 0.23
BRF1-215ENST00000549655 MYPOPQ86VE0 399 aaPredicted RBP16.48■□□□□ 0.23
BRF1-215ENST00000549655 ZDHHC23Q8IYP9 409 aa16.48■□□□□ 0.23
BRF1-215ENST00000549655 SPICQ8N5J4 248 aa16.48■□□□□ 0.23
BRF1-215ENST00000549655 OR5L1Q8NGL2 311 aa16.48■□□□□ 0.23
BRF1-215ENST00000549655 CCDC107Q8WV48 283 aa16.48■□□□□ 0.23
BRF1-215ENST00000549655 ST6GALNAC5Q9BVH7 336 aa16.48■□□□□ 0.23
BRF1-215ENST00000549655 RANBP3Q9H6Z4 567 aaPredicted RBP16.48■□□□□ 0.23
BRF1-215ENST00000549655 ZNF629Q9UEG4 869 aaPredicted RBP16.48■□□□□ 0.23
BRF1-215ENST00000549655 LHX6Q9UPM6 363 aa16.48■□□□□ 0.23
BRF1-215ENST00000549655 SFTPBP07988 381 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 SF3B4Q15427 424 aaKnown RBP eCLIP16.47■□□□□ 0.236e-8■■■■■ 29.4
BRF1-215ENST00000549655 CEACAM21Q3KPI0 293 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 PLEKHN1Q494U1 663 aaPredicted RBP16.47■□□□□ 0.23
BRF1-215ENST00000549655 OSR2Q8N2R0 312 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 MUC20Q8N307 709 aaPredicted RBP16.47■□□□□ 0.23
BRF1-215ENST00000549655 ZNF611Q8N823 705 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 BHLHE23Q8NDY6 225 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 HPSE2Q8WWQ2 592 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 FGF23Q9GZV9 251 aaPredicted RBP16.47■□□□□ 0.23
BRF1-215ENST00000549655 LUZP4Q9P127 313 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 CA11O75493 328 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 IDH3GP51553 393 aaPredicted RBP16.47■□□□□ 0.23
BRF1-215ENST00000549655 GPM6AP51674 278 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 NHLH1Q02575 133 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 PIGYQ3MUY2 71 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 ACTBL2Q562R1 376 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 RTL6Q6ICC9 239 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 SLC25A26Q70HW3 274 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 NLRC3Q7RTR2 1065 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 HOGA1Q86XE5 327 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 FBXL14Q8N1E6 418 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 MRGPRFQ96AM1 343 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 MRPS24Q96EL2 167 aaKnown RBP16.47■□□□□ 0.23
BRF1-215ENST00000549655 TMEM246Q9BRR3 403 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 PLSCR4Q9NRQ2 329 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 CA10Q9NS85 328 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 ZNF581Q9P0T4 197 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 ZNF230Q9UIE0 474 aaPredicted RBP16.47■□□□□ 0.23
BRF1-215ENST00000549655 VSIG4Q9Y279 399 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 APC2O95996 2303 aa16.47■□□□□ 0.23
BRF1-215ENST00000549655 FAM172BPA6NC97 362 aa16.46■□□□□ 0.23
BRF1-215ENST00000549655 FIGNL2A6NMB9 653 aa16.46■□□□□ 0.23
BRF1-215ENST00000549655 MKRN2OSH3BPM6 223 aa16.46■□□□□ 0.23
BRF1-215ENST00000549655 OR4E1P0C645 316 aa16.46■□□□□ 0.23
BRF1-215ENST00000549655 AMY2BP19961 511 aa16.46■□□□□ 0.23
BRF1-215ENST00000549655 COX5AP20674 150 aa16.46■□□□□ 0.23
BRF1-215ENST00000549655 PER3P56645 1201 aa16.46■□□□□ 0.23
BRF1-215ENST00000549655 PPA1Q15181 289 aa16.46■□□□□ 0.23
BRF1-215ENST00000549655 VAX1Q5SQQ9 334 aa16.46■□□□□ 0.23
BRF1-215ENST00000549655 RPUSD3Q6P087 351 aaKnown RBP16.46■□□□□ 0.23
BRF1-215ENST00000549655 ZSCAN4Q8NAM6 433 aaPredicted RBP16.46■□□□□ 0.23
BRF1-215ENST00000549655 PCDHB16Q9NRJ7 776 aa16.46■□□□□ 0.23
BRF1-215ENST00000549655 SSUH2Q9Y2M2 353 aa16.46■□□□□ 0.23
BRF1-215ENST00000549655 MGAQ8IWI9 3026 aa16.46■□□□□ 0.23
BRF1-215ENST00000549655 OR2AT4A6NND4 320 aa16.46■□□□□ 0.22
BRF1-215ENST00000549655 GEMIN2O14893 280 aaKnown RBP16.46■□□□□ 0.22
BRF1-215ENST00000549655 TNFSF13O75888 250 aa16.46■□□□□ 0.22
BRF1-215ENST00000549655 CRYABP02511 175 aaKnown RBP16.46■□□□□ 0.22
BRF1-215ENST00000549655 IL32P24001 234 aa16.46■□□□□ 0.22
BRF1-215ENST00000549655 SNU13P55769 128 aaKnown RBP16.46■□□□□ 0.22
BRF1-215ENST00000549655 MRPL49Q13405 166 aaKnown RBP16.46■□□□□ 0.22
BRF1-215ENST00000549655 Q5BKY6 102 aa16.46■□□□□ 0.22
BRF1-215ENST00000549655 SPATA46Q5T0L3 261 aa16.46■□□□□ 0.22
BRF1-215ENST00000549655 INO80CQ6PI98 192 aaPredicted RBP16.46■□□□□ 0.22
BRF1-215ENST00000549655 C17orf107Q6ZR85 190 aa16.46■□□□□ 0.22
BRF1-215ENST00000549655 SEM1Q6ZVN7 128 aa16.46■□□□□ 0.22
BRF1-215ENST00000549655 ZNF431Q8TF32 576 aaPredicted RBP16.46■□□□□ 0.22
BRF1-215ENST00000549655 GPR137Q96N19 417 aa16.46■□□□□ 0.22
BRF1-215ENST00000549655 CHIAQ9BZP6 476 aa16.46■□□□□ 0.22
BRF1-215ENST00000549655 MYOZ1Q9NP98 299 aaPredicted RBP16.46■□□□□ 0.22
BRF1-215ENST00000549655 HSF4Q9ULV5 492 aa16.46■□□□□ 0.22
BRF1-215ENST00000549655 ST3GAL6Q9Y274 331 aa16.46■□□□□ 0.22
BRF1-215ENST00000549655 LAMA5O15230 3695 aa16.46■□□□□ 0.22
BRF1-215ENST00000549655 MBD3L4A6NDZ8 208 aaPredicted RBP16.45■□□□□ 0.22
BRF1-215ENST00000549655 MBD3L3A6NE82 208 aaPredicted RBP16.45■□□□□ 0.22
BRF1-215ENST00000549655 MBD3L5A6NJ08 208 aaPredicted RBP16.45■□□□□ 0.22
BRF1-215ENST00000549655 AKR7A2O43488 359 aa16.45■□□□□ 0.22
BRF1-215ENST00000549655 HOXB1P14653 301 aaPredicted RBP16.45■□□□□ 0.22
BRF1-215ENST00000549655 HAAOP46952 286 aa16.45■□□□□ 0.22
BRF1-215ENST00000549655 UBE2MP61081 183 aaKnown RBP16.45■□□□□ 0.22
BRF1-215ENST00000549655 LAMTOR1Q6IAA8 161 aa16.45■□□□□ 0.22
BRF1-215ENST00000549655 ZDHHC22Q8N966 263 aa16.45■□□□□ 0.22
BRF1-215ENST00000549655 UXS1Q8NBZ7 420 aa16.45■□□□□ 0.22
BRF1-215ENST00000549655 OR5H2Q8NGV7 314 aa16.45■□□□□ 0.22
BRF1-215ENST00000549655 OR2T35Q8NGX2 323 aa16.45■□□□□ 0.22
BRF1-215ENST00000549655 MBD3L2Q8NHZ7 208 aaPredicted RBP16.45■□□□□ 0.22
BRF1-215ENST00000549655 MAFIPQ8WZ33 124 aa16.45■□□□□ 0.22
BRF1-215ENST00000549655 EMG1Q92979 244 aaKnown RBP16.45■□□□□ 0.22
BRF1-215ENST00000549655 RADILQ96JH8 1075 aa16.45■□□□□ 0.22
BRF1-215ENST00000549655 HIST1H2AAQ96QV6 131 aa16.45■□□□□ 0.22
BRF1-215ENST00000549655 FAAP24Q9BTP7 215 aa16.45■□□□□ 0.22
BRF1-215ENST00000549655 CDH20Q9HBT6 801 aa16.45■□□□□ 0.22
BRF1-215ENST00000549655 MGAT4AQ9UM21 535 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms