RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 SULT1C2O00338 296 aa13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 GFOD2Q3B7J2 385 aa13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 MOGAT2Q3SYC2 334 aa13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 GLYATL3Q5SZD4 288 aa13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 OR10K2Q6IF99 312 aa13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 RAB12Q6IQ22 244 aa13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 LPCAT3Q6P1A2 487 aa13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 CD163Q86VB7 1156 aa13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 TAAR6Q96RI8 345 aa13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 C12orf49Q9H741 205 aa13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 MYOZ1Q9NP98 299 aaPredicted RBP13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 HHLA2Q9UM44 414 aa13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 RAB19A4D1S5 217 aa13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 OR2AT4A6NND4 320 aa13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 F12P00748 615 aaPredicted RBP13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 PVALBP20472 110 aaPredicted RBP13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 RAB13P51153 203 aa13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 SRSF3P84103 164 aaKnown RBP13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 SCRN3Q0VDG4 424 aa13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 FAM27BQ5VT28 67 aa13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 RHOUQ7L0Q8 258 aa13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 NUFIP2Q7Z417 695 aaKnown RBP13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 COMMD2Q86X83 199 aa13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 SPACA3Q8IXA5 215 aa13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 IFT22Q9H7X7 185 aa13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 ZNF319Q9P2F9 582 aa13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 LHX6Q9UPM6 363 aa13.32□□□□□ -0.28
CLPTM1-202ENST00000541297 SLC22A20A6NK97 555 aa13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 DBHP09172 617 aa13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 HTR2CP28335 458 aa13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 SLC6A9P48067 706 aa13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 FOXG1P55316 489 aaPredicted RBP13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 ZNF704Q6ZNC4 412 aaPredicted RBP13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 FAM57BQ71RH2 274 aa13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 OR51E1Q8TCB6 317 aa13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 SOX7Q9BT81 388 aa13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 BCO1Q9HAY6 547 aa13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 TMEM235A6NFC5 223 aa13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 IGHG3P01860 377 aa13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 ISG15P05161 165 aa13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 GTF3C1Q12789 2109 aa13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 PPP1R1AQ13522 171 aa13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 RNPS1Q15287 305 aaKnown RBP13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 RIPPLY2Q5TAB7 128 aa13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 SLC22A24Q8N4F4 322 aa13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 INO80EQ8NBZ0 244 aaPredicted RBP13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 OR8B12Q8NGG6 310 aa13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 CST11Q9H112 138 aa13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 PARPBPQ9NWS1 579 aa13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 COA4Q9NYJ1 87 aa13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 TAS2R4Q9NYW5 299 aa13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 MBD2Q9UBB5 411 aa13.31□□□□□ -0.28
CLPTM1-202ENST00000541297 C5orf63A6NC05 138 aa13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 E9PLN8 166 aa13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 CD74P04233 296 aa13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 CD2P06729 351 aa13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 ZBTB25P24278 435 aa13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 PMPCAQ10713 525 aa13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 TMEM244Q5VVB8 128 aa13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 ZNF813Q6ZN06 617 aa13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 FGFBP3Q8TAT2 258 aa13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 THAP6Q8TBB0 222 aa13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 MAP1BP46821 2468 aaKnown RBP13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 A0A096LPE4 126 aa13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 A0A1W2PPZ6 126 aa13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 F8W036 122 aa13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 SYT7O43581 403 aa13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 GRB2P62993 217 aaKnown RBP13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 CXADRP78310 365 aa13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 BLOC1S1P78537 153 aa13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 ZNF774Q6NX45 483 aa13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 ABHD12BQ7Z5M8 362 aaPredicted RBP13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 OR5AP2Q8NGF4 316 aa13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 OR51A2Q8NGJ7 313 aa13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 AKR7LQ8NHP1 331 aa13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 APH1AQ96BI3 265 aa13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 TLNRD1Q9H1K6 362 aa13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 ZNF629Q9UEG4 869 aaPredicted RBP13.3□□□□□ -0.28
CLPTM1-202ENST00000541297 IGF2RP11717 2491 aa13.29□□□□□ -0.28
CLPTM1-202ENST00000541297 ZNF724A8MTY0 619 aa13.29□□□□□ -0.28
CLPTM1-202ENST00000541297 EEF1E1-BLOC1S5C9J1V9 151 aa13.29□□□□□ -0.28
CLPTM1-202ENST00000541297 ZNF32P17041 273 aa13.29□□□□□ -0.28
CLPTM1-202ENST00000541297 CDNFQ49AH0 187 aa13.29□□□□□ -0.28
CLPTM1-202ENST00000541297 IGFL3Q6UXB1 125 aa13.29□□□□□ -0.28
CLPTM1-202ENST00000541297 SLC16A14Q7RTX9 510 aa13.29□□□□□ -0.28
CLPTM1-202ENST00000541297 LYG2Q86SG7 212 aa13.29□□□□□ -0.28
CLPTM1-202ENST00000541297 SLC25A42Q86VD7 318 aa13.29□□□□□ -0.28
CLPTM1-202ENST00000541297 SKA3Q8IX90 412 aa13.29□□□□□ -0.28
CLPTM1-202ENST00000541297 ZNF100Q8IYN0 542 aa13.29□□□□□ -0.28
CLPTM1-202ENST00000541297 MRGPRFQ96AM1 343 aa13.29□□□□□ -0.28
CLPTM1-202ENST00000541297 ZZEF1O43149 2961 aa13.29□□□□□ -0.28
CLPTM1-202ENST00000541297 FGF16O43320 207 aa13.29□□□□□ -0.28
CLPTM1-202ENST00000541297 SGCEO43556 437 aa13.29□□□□□ -0.28
CLPTM1-202ENST00000541297 HIST1H3AP68431 136 aa13.29□□□□□ -0.28
CLPTM1-202ENST00000541297 RSPO1Q2MKA7 263 aaPredicted RBP13.29□□□□□ -0.28
CLPTM1-202ENST00000541297 PLEKHN1Q494U1 663 aaPredicted RBP13.29□□□□□ -0.28
CLPTM1-202ENST00000541297 HIST2H3PS2Q5TEC6 136 aa13.29□□□□□ -0.28
CLPTM1-202ENST00000541297 HIST2H3AQ71DI3 136 aa13.29□□□□□ -0.28
CLPTM1-202ENST00000541297 KCTD9Q7L273 389 aa13.29□□□□□ -0.28
CLPTM1-202ENST00000541297 P4HA3Q7Z4N8 544 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms