RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 SLC9A3R2Q15599 337 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 OCLNQ16625 522 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 ZSCAN26Q16670 478 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 DEFB112Q30KQ8 113 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 FAM76BQ5HYJ3 339 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 ATPAF1Q5TC12 328 aaPredicted RBP7.55□□□□□ -1.2
HDAC6-232ENST00000489053 RUSC1-AS1Q66K80 236 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 NCR3LG1Q68D85 454 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 SSX6Q7RTT6 188 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 PQLC1Q8N2U9 271 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 ACBD7Q8N6N7 88 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 KIR3DL3Q8N743 410 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 ZNF676Q8N7Q3 588 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 ASCC1Q8N9N2 400 aaKnown RBP7.55□□□□□ -1.2
HDAC6-232ENST00000489053 ZSCAN4Q8NAM6 433 aaPredicted RBP7.55□□□□□ -1.2
HDAC6-232ENST00000489053 POC1AQ8NBT0 407 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 ANGPTL6Q8NI99 470 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 SSMEM1Q8WWF3 244 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 PP6455Q8WZ26 134 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 SEH1LQ96EE3 360 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 GAFA1Q96PS6 74 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 TBX15Q96SF7 602 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 DCTN5Q9BTE1 182 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 ESM1Q9NQ30 184 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 ACOXLQ9NUZ1 547 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 GLS2Q9UI32 602 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 PCDHGB5Q9Y5G0 923 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 CENPVL3A0A0U1RRI6 287 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 MDFIC2A0A1B0GVS7 189 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 PQLC2LA1A4F0 135 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 TMEM89A2RUT3 159 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 RFPL4AA6NLU0 287 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 RFPL4AL1F8VTS6 287 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-232ENST00000489053 CLDN34H7C241 214 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 TNFRSF13BO14836 293 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-232ENST00000489053 INMTO95050 263 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 FBP1P09467 338 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 PSG2P11465 335 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 SELLP14151 372 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 PRKACBP22694 351 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 PRDX2P32119 198 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 TGM4P49221 684 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 POU3F4P49335 361 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 MTCP1P56278 107 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 CAV3P56539 151 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 MED21Q13503 144 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 DGUOKQ16854 277 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 KLHL22Q53GT1 634 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 SLC25A30Q5SVS4 291 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 ZNF788Q6ZQV5 615 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 ZNF561Q8N587 486 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 ZNRF1Q8ND25 227 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 OR5D13Q8NGL4 314 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 OR13C3Q8NGS6 347 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 OR14K1Q8NGZ2 314 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 TSEN15Q8WW01 171 aaKnown RBP7.54□□□□□ -1.2
HDAC6-232ENST00000489053 RORBQ92753 470 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 DACT3Q96B18 629 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-232ENST00000489053 C10orf35Q96D05 121 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 DMRTB1Q96MA1 342 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 ZNF488Q96MN9 340 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 ALG8Q9BVK2 526 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 PKIBQ9C010 78 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 COMMD4Q9H0A8 199 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 SIRPDQ9H106 197 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 DPAGT1Q9H3H5 408 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 METTL8Q9H825 291 aaKnown RBP7.54□□□□□ -1.2
HDAC6-232ENST00000489053 SIRT7Q9NRC8 400 aa7.54□□□□□ -1.2
HDAC6-232ENST00000489053 RPL36Q9Y3U8 105 aaKnown RBP7.54□□□□□ -1.2
HDAC6-232ENST00000489053 A0A1B0GTI1 187 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 LOC100130705A0A1B0GUX0 176 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 A0A1B0GW55 424 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 A0A1W2PRD5 423 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 A0A1W2PRF3 423 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 A0A1W2PRM7 423 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 IRGMA1A4Y4 181 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 MEIOCA2RUB1 952 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 M0R1W7 72 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 SYNGR1O43759 233 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 SRSF10O75494 262 aaKnown RBP7.53□□□□□ -1.2
HDAC6-232ENST00000489053 IGLV3-1P01715 115 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 DUX4L2P0CJ85 424 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 DUX4L3P0CJ86 424 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 DUX4L4P0CJ87 422 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 DUX4L5P0CJ88 424 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 DUX4L6P0CJ89 424 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 DUX4L7P0CJ90 424 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 PGA5P0DJD9 388 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 HKR1P10072 659 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 MYL12AP19105 171 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 CCL1P22362 96 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 CFPP27918 469 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 COMPP49747 757 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-232ENST00000489053 RBP2P50120 134 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 GBX2P52951 348 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-232ENST00000489053 LGALS4P56470 323 aa7.53□□□□□ -1.2
HDAC6-232ENST00000489053 RPL31P62899 125 aaKnown RBP7.53□□□□□ -1.2
HDAC6-232ENST00000489053 ELF3P78545 371 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-232ENST00000489053 ZNF91Q05481 1191 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms