RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 CDH26Q8IXH8 852 aa16.26■□□□□ 0.19
PCOLCE-208ENST00000487172 MUC20Q8N307 709 aaPredicted RBP16.26■□□□□ 0.19
PCOLCE-208ENST00000487172 TMEM165Q9HC07 324 aa16.26■□□□□ 0.19
PCOLCE-208ENST00000487172 IGHV4-61A0A0C4DH41 118 aa16.25■□□□□ 0.19
PCOLCE-208ENST00000487172 MEGF11A6BM72 1044 aa16.25■□□□□ 0.19
PCOLCE-208ENST00000487172 LGALS8O00214 317 aa16.25■□□□□ 0.19
PCOLCE-208ENST00000487172 SYNGR1O43759 233 aa16.25■□□□□ 0.19
PCOLCE-208ENST00000487172 ARL6IP5O75915 188 aa16.25■□□□□ 0.19
PCOLCE-208ENST00000487172 PGA5P0DJD9 388 aa16.25■□□□□ 0.19
PCOLCE-208ENST00000487172 EGR1P18146 543 aa16.25■□□□□ 0.19
PCOLCE-208ENST00000487172 SRMP19623 302 aa16.25■□□□□ 0.19
PCOLCE-208ENST00000487172 PDZK1IP1Q13113 114 aa16.25■□□□□ 0.19
PCOLCE-208ENST00000487172 ZMYND11Q15326 602 aa16.25■□□□□ 0.19
PCOLCE-208ENST00000487172 HSD17B12Q53GQ0 312 aa16.25■□□□□ 0.19
PCOLCE-208ENST00000487172 FAM201AQ5SY85 155 aa16.25■□□□□ 0.19
PCOLCE-208ENST00000487172 TEX36Q5VZQ5 186 aa16.25■□□□□ 0.19
PCOLCE-208ENST00000487172 POC1AQ8NBT0 407 aa16.25■□□□□ 0.19
PCOLCE-208ENST00000487172 OR52N4Q8NGI2 321 aa16.25■□□□□ 0.19
PCOLCE-208ENST00000487172 RASL12Q9NYN1 266 aa16.25■□□□□ 0.19
PCOLCE-208ENST00000487172 TRAV38-1A0A0B4J264 116 aa16.24■□□□□ 0.19
PCOLCE-208ENST00000487172 OOEPA6NGQ2 149 aa16.24■□□□□ 0.19
PCOLCE-208ENST00000487172 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.24■□□□□ 0.19
PCOLCE-208ENST00000487172 AKR7A2O43488 359 aa16.24■□□□□ 0.19
PCOLCE-208ENST00000487172 MUC1P15941 1255 aaPredicted RBP16.24■□□□□ 0.19
PCOLCE-208ENST00000487172 CPT2P23786 658 aa16.24■□□□□ 0.19
PCOLCE-208ENST00000487172 ZP1P60852 638 aa16.24■□□□□ 0.19
PCOLCE-208ENST00000487172 KCNJ8Q15842 424 aa16.24■□□□□ 0.19
PCOLCE-208ENST00000487172 ZNF404Q494X3 552 aa16.24■□□□□ 0.19
PCOLCE-208ENST00000487172 FAM27D1Q5T7N8 215 aa16.24■□□□□ 0.19
PCOLCE-208ENST00000487172 RNF144BQ7Z419 303 aa16.24■□□□□ 0.19
PCOLCE-208ENST00000487172 MKXQ8IYA7 352 aa16.24■□□□□ 0.19
PCOLCE-208ENST00000487172 SAXO1Q8IYX7 474 aa16.24■□□□□ 0.19
PCOLCE-208ENST00000487172 SPICQ8N5J4 248 aa16.24■□□□□ 0.19
PCOLCE-208ENST00000487172 ZSCAN4Q8NAM6 433 aaPredicted RBP16.24■□□□□ 0.19
PCOLCE-208ENST00000487172 SPACA5Q96QH8 159 aa16.24■□□□□ 0.19
PCOLCE-208ENST00000487172 TMUB1Q9BVT8 246 aa16.24■□□□□ 0.19
PCOLCE-208ENST00000487172 MRPS26Q9BYN8 205 aaKnown RBP16.24■□□□□ 0.19
PCOLCE-208ENST00000487172 PPIL3Q9H2H8 161 aaKnown RBP16.24■□□□□ 0.19
PCOLCE-208ENST00000487172 TCF7L1Q9HCS4 588 aa16.24■□□□□ 0.19
PCOLCE-208ENST00000487172 H7C1Q1 480 aa16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 TNFRSF13BO14836 293 aaPredicted RBP16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 WNT9BO14905 357 aa16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 NDUFA2O43678 99 aa16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 ZNF205O95201 554 aa16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 CYB5AP00167 134 aa16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 GLRA1P23415 457 aa16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 FGF9P31371 208 aaPredicted RBP16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 CD80P33681 288 aa16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 ZNF93P35789 620 aaPredicted RBP16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 ERVK11-1P61568 191 aa16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 DDI2Q5TDH0 399 aa16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 SLC25A26Q70HW3 274 aa16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 CIARTQ8N365 385 aaPredicted RBP16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 NKAIN3Q8N8D7 197 aa16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 BOLLQ8N9W6 283 aaKnown RBP16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 CLDND2Q8NHS1 167 aa16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 C12orf43Q96C57 262 aaKnown RBP16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 COX4I2Q96KJ9 171 aa16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 NRIP2Q9BQI9 281 aa16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 TMEM246Q9BRR3 403 aa16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 HES4Q9HCC6 221 aa16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 MTCH1Q9NZJ7 389 aa16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 STUB1Q9UNE7 303 aa16.23■□□□□ 0.19
PCOLCE-208ENST00000487172 ISPDA4D126 451 aa16.22■□□□□ 0.19
PCOLCE-208ENST00000487172 MAS1P04201 325 aa16.22■□□□□ 0.19
PCOLCE-208ENST00000487172 CD37P11049 281 aa16.22■□□□□ 0.19
PCOLCE-208ENST00000487172 CD36P16671 472 aa16.22■□□□□ 0.19
PCOLCE-208ENST00000487172 POU3F4P49335 361 aa16.22■□□□□ 0.19
PCOLCE-208ENST00000487172 LMO4P61968 165 aa16.22■□□□□ 0.19
PCOLCE-208ENST00000487172 HOXA4Q00056 320 aaPredicted RBP16.22■□□□□ 0.19
PCOLCE-208ENST00000487172 MICBQ29980 383 aa16.22■□□□□ 0.19
PCOLCE-208ENST00000487172 SFRP4Q6FHJ7 346 aaPredicted RBP16.22■□□□□ 0.19
PCOLCE-208ENST00000487172 LRRTM1Q86UE6 522 aa16.22■□□□□ 0.19
PCOLCE-208ENST00000487172 LYPD6Q86Y78 171 aa16.22■□□□□ 0.19
PCOLCE-208ENST00000487172 PXT1Q8NFP0 134 aa16.22■□□□□ 0.19
PCOLCE-208ENST00000487172 TMIGD2Q96BF3 282 aa16.22■□□□□ 0.19
PCOLCE-208ENST00000487172 GPER1Q99527 375 aa16.22■□□□□ 0.19
PCOLCE-208ENST00000487172 GAL3ST1Q99999 423 aa16.22■□□□□ 0.19
PCOLCE-208ENST00000487172 SLITRK2Q9H156 845 aa16.22■□□□□ 0.19
PCOLCE-208ENST00000487172 WDR13Q9H1Z4 485 aa16.22■□□□□ 0.19
PCOLCE-208ENST00000487172 PATZ1Q9HBE1 687 aaKnown RBP16.22■□□□□ 0.19
PCOLCE-208ENST00000487172 RHOFQ9HBH0 211 aa16.22■□□□□ 0.19
PCOLCE-208ENST00000487172 C3orf80F5H4A9 247 aa16.21■□□□□ 0.19
PCOLCE-208ENST00000487172 FOSL1P15407 271 aa16.21■□□□□ 0.19
PCOLCE-208ENST00000487172 ASCL4Q6XD76 172 aa16.21■□□□□ 0.19
PCOLCE-208ENST00000487172 DCDC5Q6ZRR9 648 aa16.21■□□□□ 0.19
PCOLCE-208ENST00000487172 SATL1Q86VE3 508 aa16.21■□□□□ 0.19
PCOLCE-208ENST00000487172 FAM90A1Q86YD7 464 aa16.21■□□□□ 0.19
PCOLCE-208ENST00000487172 Q8IYB0 196 aa16.21■□□□□ 0.19
PCOLCE-208ENST00000487172 PNLDC1Q8NA58 520 aaKnown RBP16.21■□□□□ 0.19
PCOLCE-208ENST00000487172 C19orf18Q8NEA5 215 aa16.21■□□□□ 0.19
PCOLCE-208ENST00000487172 DEFB108BQ8NET1 73 aa16.21■□□□□ 0.19
PCOLCE-208ENST00000487172 OR51F2Q8NH61 342 aa16.21■□□□□ 0.19
PCOLCE-208ENST00000487172 RFT1Q96AA3 541 aa16.21■□□□□ 0.19
PCOLCE-208ENST00000487172 FOXRED1Q96CU9 486 aaPredicted RBP16.21■□□□□ 0.19
PCOLCE-208ENST00000487172 RAB39BQ96DA2 213 aa16.21■□□□□ 0.19
PCOLCE-208ENST00000487172 C1orf159Q96HA4 380 aa16.21■□□□□ 0.19
PCOLCE-208ENST00000487172 C18orf12Q96KH6 178 aa16.21■□□□□ 0.19
PCOLCE-208ENST00000487172 CEP19Q96LK0 163 aa16.21■□□□□ 0.19
PCOLCE-208ENST00000487172 SNTG1Q9NSN8 517 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms