RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 TMEM106AQ96A25 262 aa9.06□□□□□ -0.96
ATG4B-219ENST00000479941 NEIL1Q96FI4 390 aaPredicted RBP9.06□□□□□ -0.96
ATG4B-219ENST00000479941 OPALINQ96PE5 141 aa9.06□□□□□ -0.96
ATG4B-219ENST00000479941 YAE1D1Q9NRH1 226 aa9.06□□□□□ -0.96
ATG4B-219ENST00000479941 RASL12Q9NYN1 266 aa9.06□□□□□ -0.96
ATG4B-219ENST00000479941 KCNS2Q9ULS6 477 aa9.06□□□□□ -0.96
ATG4B-219ENST00000479941 LRCH1Q9Y2L9 728 aa9.06□□□□□ -0.96
ATG4B-219ENST00000479941 MALRD1Q5VYJ5 2156 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 TRBV5-5A0A0J9YX44 114 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.05□□□□□ -0.96
ATG4B-219ENST00000479941 TNFRSF13BO14836 293 aaPredicted RBP9.05□□□□□ -0.96
ATG4B-219ENST00000479941 SULT1B1O43704 296 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 NOS1APO75052 506 aaPredicted RBP9.05□□□□□ -0.96
ATG4B-219ENST00000479941 FOXH1O75593 365 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 ACAA1P09110 424 aaPredicted RBP9.05□□□□□ -0.96
ATG4B-219ENST00000479941 PGA5P0DJD9 388 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 PCMT1P22061 227 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 SOX2P48431 317 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 DVL1P1P54792 670 aaPredicted RBP9.05□□□□□ -0.96
ATG4B-219ENST00000479941 MTCP1P56278 107 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 HOXA4Q00056 320 aaPredicted RBP9.05□□□□□ -0.96
ATG4B-219ENST00000479941 IL24Q13007 206 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 GPR50Q13585 617 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 Q499Y3 187 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 ESCO2Q56NI9 601 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 Q71RC1 249 aaPredicted RBP9.05□□□□□ -0.96
ATG4B-219ENST00000479941 GLCCI1Q86VQ1 547 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 FAM90A1Q86YD7 464 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 CALHM1Q8IU99 346 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 MS4A15Q8N5U1 240 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 POC1AQ8NBT0 407 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 OR8B3Q8NGG8 313 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 THRSPQ92748 146 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 OR5M11Q96RB7 305 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 OR8B2Q96RD0 313 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 ISYNA1Q9NPH2 558 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 TMEM160Q9NX00 188 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 KAAG1Q9UBP8 84 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 DNAJB11Q9UBS4 358 aa9.05□□□□□ -0.96
ATG4B-219ENST00000479941 FN1P02751 2386 aaKnown RBP9.05□□□□□ -0.96
ATG4B-219ENST00000479941 MXRA5Q9NR99 2828 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 IGKV1-27A0A075B6S5 117 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 TRAV20A0A0B4J274 112 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 PPIAL4CA0A0B4J2A2 164 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 PNMA8CA0A1B0GUJ8 204 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 A8MXK9 166 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 MAGEB3O15480 346 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 SYNGR1O43759 233 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 CYB5AP00167 134 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 GYPAP02724 150 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 RAB3AP20336 220 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 NPY4RP50391 375 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 RPS11P62280 158 aaKnown RBP eCLIP9.04□□□□□ -0.96
ATG4B-219ENST00000479941 DOC2BQ14184 412 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 TBCEQ15813 527 aaPredicted RBP9.04□□□□□ -0.96
ATG4B-219ENST00000479941 ZNF529Q6P280 563 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 LYPD2Q6UXB3 125 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 ANGPTL5Q86XS5 388 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 MKXQ8IYA7 352 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 UFD1Q92890 307 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 TMEM186Q96B77 213 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 TMIGD2Q96BF3 282 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 CPNE2Q96FN4 548 aaPredicted RBP9.04□□□□□ -0.96
ATG4B-219ENST00000479941 DNTTIP1Q9H147 329 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 WDR13Q9H1Z4 485 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 LPAR2Q9HBW0 351 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 HIF1ANQ9NWT6 349 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 NLKQ9UBE8 527 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 CLN8Q9UBY8 286 aa9.04□□□□□ -0.96
ATG4B-219ENST00000479941 POLR3KQ9Y2Y1 108 aaPredicted RBP9.04□□□□□ -0.96
ATG4B-219ENST00000479941 IGHV3OR15-7A0A075B7D8 119 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 ZNF879B4DU55 563 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 TMPRSS2O15393 492 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 ADAM20O43506 726 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 GPX5O75715 221 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 HCKP08631 526 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 HSMCR30P0CW71 290 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 GATA3P23771 443 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 ZFP36P26651 326 aaKnown RBP9.03□□□□□ -0.96
ATG4B-219ENST00000479941 MAPK3P27361 379 aaPredicted RBP9.03□□□□□ -0.96
ATG4B-219ENST00000479941 MAP2K4P45985 399 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 PITPNBP48739 271 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 GMFBP60983 142 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 ERVK11-1P61568 191 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 SEC61A1P61619 476 aaKnown RBP9.03□□□□□ -0.96
ATG4B-219ENST00000479941 GNB2P62879 340 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 PPP3R1P63098 170 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 MLLT11Q13015 90 aaPredicted RBP9.03□□□□□ -0.96
ATG4B-219ENST00000479941 TPBGQ13641 420 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 SMIM21Q3B7S5 101 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 ATPAF1Q5TC12 328 aaPredicted RBP9.03□□□□□ -0.96
ATG4B-219ENST00000479941 STUMQ69YW2 141 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 ACP7Q6ZNF0 438 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 SLC25A26Q70HW3 274 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 SLC36A1Q7Z2H8 476 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 Q8IYB0 196 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 SVOPQ8N4V2 548 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 OR13C5Q8NGS8 318 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 ANGPTL6Q8NI99 470 aa9.03□□□□□ -0.96
ATG4B-219ENST00000479941 SEH1LQ96EE3 360 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms