RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 GPR119Q8TDV5 335 aa12.18□□□□□ -0.46
HDAC1-206ENST00000476391 C8orf44Q96CB5 159 aa12.18□□□□□ -0.46
HDAC1-206ENST00000476391 RAB11FIP5Q9BXF6 653 aa12.18□□□□□ -0.46
HDAC1-206ENST00000476391 HSF4Q9ULV5 492 aa12.18□□□□□ -0.46
HDAC1-206ENST00000476391 KLF8O95600 359 aaPredicted RBP12.17□□□□□ -0.46
HDAC1-206ENST00000476391 RPL18Q07020 188 aaKnown RBP12.17□□□□□ -0.46
HDAC1-206ENST00000476391 FBXO46Q6PJ61 603 aaPredicted RBP12.17□□□□□ -0.46
HDAC1-206ENST00000476391 SULF2Q8IWU5 870 aa12.17□□□□□ -0.46
HDAC1-206ENST00000476391 FBXL14Q8N1E6 418 aa12.17□□□□□ -0.46
HDAC1-206ENST00000476391 HOXB13Q92826 284 aaPredicted RBP12.17□□□□□ -0.46
HDAC1-206ENST00000476391 IMMP2LQ96T52 175 aa12.17□□□□□ -0.46
HDAC1-206ENST00000476391 MMP25Q9NPA2 562 aa12.17□□□□□ -0.46
HDAC1-206ENST00000476391 SDCBPO00560 298 aaPredicted RBP12.17□□□□□ -0.46
HDAC1-206ENST00000476391 ST8SIA3O43173 380 aa12.17□□□□□ -0.46
HDAC1-206ENST00000476391 XRCC2O43543 280 aa12.17□□□□□ -0.46
HDAC1-206ENST00000476391 DUSP11O75319 330 aaKnown RBP12.17□□□□□ -0.46
HDAC1-206ENST00000476391 CBR3O75828 277 aa12.17□□□□□ -0.46
HDAC1-206ENST00000476391 CTSDP07339 412 aaPredicted RBP12.17□□□□□ -0.46
HDAC1-206ENST00000476391 CHRNB4P30926 498 aa12.17□□□□□ -0.46
HDAC1-206ENST00000476391 SFTPDP35247 375 aa12.17□□□□□ -0.46
HDAC1-206ENST00000476391 RAB11AP62491 216 aa12.17□□□□□ -0.46
HDAC1-206ENST00000476391 ZNF141Q15928 474 aa12.17□□□□□ -0.46
HDAC1-206ENST00000476391 OR2L3Q8NG85 312 aa12.17□□□□□ -0.46
HDAC1-206ENST00000476391 DOK4Q8TEW6 326 aa12.17□□□□□ -0.46
HDAC1-206ENST00000476391 TBX15Q96SF7 602 aa12.17□□□□□ -0.46
HDAC1-206ENST00000476391 ZNF2Q9BSG1 426 aaPredicted RBP12.17□□□□□ -0.46
HDAC1-206ENST00000476391 GPR35Q9HC97 309 aa12.17□□□□□ -0.46
HDAC1-206ENST00000476391 FOXJ2Q9P0K8 574 aa12.17□□□□□ -0.46
HDAC1-206ENST00000476391 CHD3Q12873 2000 aaKnown RBP12.17□□□□□ -0.46
HDAC1-206ENST00000476391 A0A0A6YYD4 124 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 ATXN7O15265 892 aaPredicted RBP12.16□□□□□ -0.46
HDAC1-206ENST00000476391 DDNO94850 711 aaPredicted RBP12.16□□□□□ -0.46
HDAC1-206ENST00000476391 OR6A2O95222 327 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 ZNF888P0CJ79 500 aaPredicted RBP12.16□□□□□ -0.46
HDAC1-206ENST00000476391 PTTG1IPP53801 180 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 CSNK2A1P68400 391 aaPredicted RBP12.16□□□□□ -0.46
HDAC1-206ENST00000476391 EWSR1Q01844 656 aaKnown RBP eCLIP12.16□□□□□ -0.46
HDAC1-206ENST00000476391 FAM53BQ14153 422 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 PRICKLE4Q2TBC4 344 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 ACTL10Q5JWF8 245 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 SMIM15Q7Z3B0 74 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 FAM160A2Q8N612 972 aaPredicted RBP12.16□□□□□ -0.46
HDAC1-206ENST00000476391 CSNK2A3Q8NEV1 391 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 PTPMT1Q8WUK0 201 aaPredicted RBP12.16□□□□□ -0.46
HDAC1-206ENST00000476391 ORAOV1Q8WV07 137 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 GNPNAT1Q96EK6 184 aaPredicted RBP12.16□□□□□ -0.46
HDAC1-206ENST00000476391 SCARF2Q96GP6 870 aaPredicted RBP12.16□□□□□ -0.46
HDAC1-206ENST00000476391 SLC35E1Q96K37 410 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 ABHD6Q9BV23 337 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 TPSD1Q9BZJ3 242 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 G6PC2Q9NQR9 355 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 LAMP3Q9UQV4 416 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 EMC9Q9Y3B6 208 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 TRAV1-1A0A0B4J248 108 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 ZNF705FA8MVS1 300 aaPredicted RBP12.16□□□□□ -0.46
HDAC1-206ENST00000476391 GRXCR1A8MXD5 290 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 ZNF732B4DXR9 585 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 K7EQS6 105 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 SOCS1O15524 211 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 ZNF705DP0CH99 300 aaPredicted RBP12.16□□□□□ -0.46
HDAC1-206ENST00000476391 ZNF705BP0CI00 300 aaPredicted RBP12.16□□□□□ -0.46
HDAC1-206ENST00000476391 PNMTP11086 282 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 AKR1A1P14550 325 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 SNU13P55769 128 aaKnown RBP12.16□□□□□ -0.46
HDAC1-206ENST00000476391 CDK3Q00526 305 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 ARFRP1Q13795 201 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 NFATC4Q14934 902 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 EXOSC7Q15024 291 aaKnown RBP12.16□□□□□ -0.46
HDAC1-206ENST00000476391 GRINAQ7Z429 371 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 CACUL1Q86Y37 369 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 OR52N5Q8NH56 324 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 ZCCHC14Q8WYQ9 949 aaKnown RBP12.16□□□□□ -0.46
HDAC1-206ENST00000476391 BOD1Q96IK1 185 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 TP53RKQ96S44 253 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 ELOVL1Q9BW60 279 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 CISD1Q9NZ45 108 aaKnown RBP12.16□□□□□ -0.46
HDAC1-206ENST00000476391 B3GAT1Q9P2W7 334 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 DAPP1Q9UN19 280 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 OR1A2Q9Y585 309 aa12.16□□□□□ -0.46
HDAC1-206ENST00000476391 LMX1BO60663 402 aa12.15□□□□□ -0.46
HDAC1-206ENST00000476391 PITX3O75364 302 aa12.15□□□□□ -0.46
HDAC1-206ENST00000476391 PPBPP02775 128 aa12.15□□□□□ -0.46
HDAC1-206ENST00000476391 PSG6Q00889 435 aa12.15□□□□□ -0.46
HDAC1-206ENST00000476391 CCL14Q16627 93 aa12.15□□□□□ -0.46
HDAC1-206ENST00000476391 FBXW12Q6X9E4 464 aa12.15□□□□□ -0.46
HDAC1-206ENST00000476391 OR2AJ1Q8NGZ0 328 aa12.15□□□□□ -0.46
HDAC1-206ENST00000476391 LMF2Q9BU23 707 aaKnown RBP12.15□□□□□ -0.46
HDAC1-206ENST00000476391 MRPS23Q9Y3D9 190 aaKnown RBP12.15□□□□□ -0.46
HDAC1-206ENST00000476391 SPINT1O43278 529 aa12.15□□□□□ -0.47
HDAC1-206ENST00000476391 HCRTR2O43614 444 aa12.15□□□□□ -0.47
HDAC1-206ENST00000476391 RAD51DO75771 328 aa12.15□□□□□ -0.47
HDAC1-206ENST00000476391 TDGF1P13385 188 aa12.15□□□□□ -0.47
HDAC1-206ENST00000476391 CST5P28325 142 aaPredicted RBP12.15□□□□□ -0.47
HDAC1-206ENST00000476391 DUSP1P28562 367 aa12.15□□□□□ -0.47
HDAC1-206ENST00000476391 TMEM50BP56557 158 aa12.15□□□□□ -0.47
HDAC1-206ENST00000476391 ID2Q02363 134 aa12.15□□□□□ -0.47
HDAC1-206ENST00000476391 ZP2Q05996 745 aa12.15□□□□□ -0.47
HDAC1-206ENST00000476391 IL24Q13007 206 aa12.15□□□□□ -0.47
HDAC1-206ENST00000476391 GNMTQ14749 295 aa12.15□□□□□ -0.47
HDAC1-206ENST00000476391 SHHQ15465 462 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms