RNA–Protein interactions for RNA: ENST00000468480.5

RNF6-204, Transcript of ring finger protein 6, humanhuman

TSL 1 (best)

Gene RNF6, Length 1,105 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6-204ENST00000468480 Q6ZTK2 550 aa14.3□□□□□ -0.12
RNF6-204ENST00000468480 DOLPP1Q86YN1 238 aa14.3□□□□□ -0.12
RNF6-204ENST00000468480 C17orf78Q8N4C9 275 aa14.3□□□□□ -0.12
RNF6-204ENST00000468480 CPEB3Q8NE35 698 aaKnown RBP14.3□□□□□ -0.12
RNF6-204ENST00000468480 OR2AE1Q8NHA4 323 aa14.3□□□□□ -0.12
RNF6-204ENST00000468480 RAB3CQ96E17 227 aa14.3□□□□□ -0.12
RNF6-204ENST00000468480 SEH1LQ96EE3 360 aa14.3□□□□□ -0.12
RNF6-204ENST00000468480 MRPS24Q96EL2 167 aaKnown RBP14.3□□□□□ -0.12
RNF6-204ENST00000468480 SOX7Q9BT81 388 aa14.3□□□□□ -0.12
RNF6-204ENST00000468480 C20orf85Q9H1P6 137 aa14.3□□□□□ -0.12
RNF6-204ENST00000468480 MED28Q9H204 178 aa14.3□□□□□ -0.12
RNF6-204ENST00000468480 IFT46Q9NQC8 304 aa14.3□□□□□ -0.12
RNF6-204ENST00000468480 GPR173Q9NS66 373 aa14.3□□□□□ -0.12
RNF6-204ENST00000468480 SCP2D1Q9UJQ7 156 aa14.3□□□□□ -0.12
RNF6-204ENST00000468480 PLEKHA6Q9Y2H5 1048 aa14.3□□□□□ -0.12
RNF6-204ENST00000468480 NOP16Q9Y3C1 178 aaKnown RBP14.3□□□□□ -0.12
RNF6-204ENST00000468480 ZNF407Q9C0G0 2248 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 C7orf66A4D0T2 115 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 DISC1C4P0D8 188 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 RAB27BO00194 218 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 CA11O75493 328 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 IL18BPO95998 194 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 CSTBP04080 98 aaKnown RBP14.29□□□□□ -0.12
RNF6-204ENST00000468480 CCNOP22674 350 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 TUBG1P23258 451 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 VEGFCP49767 419 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 RRAS2P62070 204 aaPredicted RBP14.29□□□□□ -0.12
RNF6-204ENST00000468480 ZNF92Q03936 586 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 ZNF260Q3ZCT1 412 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 METTL11BQ5VVY1 283 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 PLCXD3Q63HM9 321 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 STEAP1BQ6NZ63 245 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 PAQR4Q8N4S7 273 aaPredicted RBP14.29□□□□□ -0.12
RNF6-204ENST00000468480 CNEP1R1Q8N9A8 125 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 CA5BP1Q8WTZ4 195 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 MED30Q96HR3 178 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 POM121L2Q96KW2 1035 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 HIST1H2AAQ96QV6 131 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 FOXC2Q99958 501 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 REPIN1Q9BWE0 567 aaKnown RBP14.29□□□□□ -0.12
RNF6-204ENST00000468480 LPAR5Q9H1C0 372 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 KCNK15Q9H427 330 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 TUBG2Q9NRH3 451 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 PROCRQ9UNN8 238 aa14.29□□□□□ -0.12
RNF6-204ENST00000468480 TRAV6A0A075B6T7 132 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 LOC100509620A0A075B734 347 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 ZNF736B4DX44 427 aaPredicted RBP14.28□□□□□ -0.12
RNF6-204ENST00000468480 NDUFB6O95139 128 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 RAB3DO95716 219 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 TPOP07202 933 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 TMEM225BP0DP42 221 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 HGFACQ04756 655 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 TFF3Q07654 80 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 P2RY6Q15077 328 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 RSU1Q15404 277 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 CARTPTQ16568 116 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 SLC22A6Q4U2R8 563 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 CD276Q5ZPR3 534 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 OR10K2Q6IF99 312 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 PLXDC2Q6UX71 529 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 TMEM200AQ86VY9 491 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 C1orf174Q8IYL3 243 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 ZSCAN4Q8NAM6 433 aaPredicted RBP14.28□□□□□ -0.12
RNF6-204ENST00000468480 SLC30A7Q8NEW0 376 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 PXT1Q8NFP0 134 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 OR51T1Q8NGJ9 327 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 OR5M9Q8NGP3 310 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 GCDHQ92947 438 aaPredicted RBP14.28□□□□□ -0.12
RNF6-204ENST00000468480 DACT3Q96B18 629 aaPredicted RBP14.28□□□□□ -0.12
RNF6-204ENST00000468480 SLC25A21Q9BQT8 299 aaPredicted RBP14.28□□□□□ -0.12
RNF6-204ENST00000468480 TM2D1Q9BX74 207 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 ELL3Q9HB65 397 aaPredicted RBP14.28□□□□□ -0.12
RNF6-204ENST00000468480 CDH20Q9HBT6 801 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.28□□□□□ -0.12
RNF6-204ENST00000468480 B3GNT2Q9NY97 397 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 IL36GQ9NZH8 169 aa14.28□□□□□ -0.12
RNF6-204ENST00000468480 CSPG4Q6UVK1 2322 aa14.27□□□□□ -0.12
RNF6-204ENST00000468480 FBN1P35555 2871 aaKnown RBP14.27□□□□□ -0.12
RNF6-204ENST00000468480 COL6A5A8TX70 2615 aa14.27□□□□□ -0.13
RNF6-204ENST00000468480 FAM230AA0A1W2PPH8 454 aa14.27□□□□□ -0.13
RNF6-204ENST00000468480 C5orf63A6NC05 138 aa14.27□□□□□ -0.13
RNF6-204ENST00000468480 NKX2-6A6NCS4 301 aa14.27□□□□□ -0.13
RNF6-204ENST00000468480 MBD3L4A6NDZ8 208 aaPredicted RBP14.27□□□□□ -0.13
RNF6-204ENST00000468480 MBD3L3A6NE82 208 aaPredicted RBP14.27□□□□□ -0.13
RNF6-204ENST00000468480 MBD3L5A6NJ08 208 aaPredicted RBP14.27□□□□□ -0.13
RNF6-204ENST00000468480 SERPINE3A8MV23 424 aa14.27□□□□□ -0.13
RNF6-204ENST00000468480 CST4P01036 141 aa14.27□□□□□ -0.13
RNF6-204ENST00000468480 HIST1H1DP16402 221 aaKnown RBP14.27□□□□□ -0.13
RNF6-204ENST00000468480 MGMTP16455 207 aa14.27□□□□□ -0.13
RNF6-204ENST00000468480 SELEP16581 610 aa14.27□□□□□ -0.13
RNF6-204ENST00000468480 ACKR3P25106 362 aa14.27□□□□□ -0.13
RNF6-204ENST00000468480 CCR6P51684 374 aa14.27□□□□□ -0.13
RNF6-204ENST00000468480 ZFP69Q49AA0 526 aa14.27□□□□□ -0.13
RNF6-204ENST00000468480 ZNF585AQ6P3V2 769 aa14.27□□□□□ -0.13
RNF6-204ENST00000468480 BEND4Q6ZU67 534 aa14.27□□□□□ -0.13
RNF6-204ENST00000468480 MOB3CQ70IA8 216 aa14.27□□□□□ -0.13
RNF6-204ENST00000468480 TRAPPC6BQ86SZ2 158 aa14.27□□□□□ -0.13
RNF6-204ENST00000468480 FAM89BQ8N5H3 189 aa14.27□□□□□ -0.13
RNF6-204ENST00000468480 OR6F1Q8NGZ6 308 aa14.27□□□□□ -0.13
RNF6-204ENST00000468480 MBD3L2Q8NHZ7 208 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms