RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 LOC107986453A0A1B0GWG9 222 aa8.37□□□□□ -1.07
SF3A3-204ENST00000462258 A0A1W2PQ09 198 aa8.37□□□□□ -1.07
SF3A3-204ENST00000462258 PQLC2LA1A4F0 135 aa8.37□□□□□ -1.07
SF3A3-204ENST00000462258 EBAG9O00559 213 aa8.37□□□□□ -1.07
SF3A3-204ENST00000462258 ENTPD6O75354 484 aa8.37□□□□□ -1.07
SF3A3-204ENST00000462258 MELTFP08582 738 aa8.37□□□□□ -1.07
SF3A3-204ENST00000462258 ACAA1P09110 424 aaPredicted RBP8.37□□□□□ -1.07
SF3A3-204ENST00000462258 UBCP0CG48 685 aaKnown RBP8.37□□□□□ -1.07
SF3A3-204ENST00000462258 PGA5P0DJD9 388 aa8.37□□□□□ -1.07
SF3A3-204ENST00000462258 CAV3P56539 151 aa8.37□□□□□ -1.07
SF3A3-204ENST00000462258 ISL1P61371 349 aa8.37□□□□□ -1.07
SF3A3-204ENST00000462258 SNRPGP62308 76 aaKnown RBP8.37□□□□□ -1.07
SF3A3-204ENST00000462258 ZNF85Q03923 595 aa8.37□□□□□ -1.07
SF3A3-204ENST00000462258 MEDAGQ5VYS4 303 aa8.37□□□□□ -1.07
SF3A3-204ENST00000462258 ACP7Q6ZNF0 438 aa8.37□□□□□ -1.07
SF3A3-204ENST00000462258 BATF2Q8N1L9 274 aa8.37□□□□□ -1.07
SF3A3-204ENST00000462258 PRSS35Q8N3Z0 413 aa8.37□□□□□ -1.07
SF3A3-204ENST00000462258 ZNRF1Q8ND25 227 aa8.37□□□□□ -1.07
SF3A3-204ENST00000462258 TRMT10AQ8TBZ6 339 aaKnown RBP8.37□□□□□ -1.07
SF3A3-204ENST00000462258 NPRL2Q8WTW4 380 aa8.37□□□□□ -1.07
SF3A3-204ENST00000462258 RNFT2Q96EX2 444 aa8.37□□□□□ -1.07
SF3A3-204ENST00000462258 SDSLQ96GA7 329 aa8.37□□□□□ -1.07
SF3A3-204ENST00000462258 DMRTB1Q96MA1 342 aa8.37□□□□□ -1.07
SF3A3-204ENST00000462258 C9orf16Q9BUW7 83 aa8.37□□□□□ -1.07
SF3A3-204ENST00000462258 TNFRSF19Q9NS68 423 aa8.37□□□□□ -1.07
SF3A3-204ENST00000462258 RASL12Q9NYN1 266 aa8.37□□□□□ -1.07
SF3A3-204ENST00000462258 MAB21L2Q9Y586 359 aa8.37□□□□□ -1.07
SF3A3-204ENST00000462258 TRBV23-1A0A0A0MS06 115 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 A0A0U1RQK1 487 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 SNTNA6NMZ2 147 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 E9PQ18 207 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 GATBO75879 557 aaKnown RBP8.36□□□□□ -1.07
SF3A3-204ENST00000462258 NXPH2O95156 264 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 MPZP25189 248 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 KIR3DL2P43630 455 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 CEBPDP49716 269 aaPredicted RBP8.36□□□□□ -1.07
SF3A3-204ENST00000462258 CAPZA1P52907 286 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 GUCA2AQ02747 115 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 PRB3Q04118 309 aaPredicted RBP8.36□□□□□ -1.07
SF3A3-204ENST00000462258 ZNF91Q05481 1191 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 KLRD1Q13241 179 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 OCLNQ16625 522 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 SLC25A30Q5SVS4 291 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 METAP1DQ6UB28 335 aaPredicted RBP8.36□□□□□ -1.07
SF3A3-204ENST00000462258 Q6YL49 198 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 CALHM1Q8IU99 346 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 C10orf67Q8IYJ2 551 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 TMEM86BQ8N661 226 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 Q8N7P7 452 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 CCDC54Q8NEL0 328 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 SSMEM1Q8WWF3 244 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 TAF15Q92804 592 aaKnown RBP eCLIP8.36□□□□□ -1.07
SF3A3-204ENST00000462258 UBE2FQ969M7 185 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 NRIP2Q9BQI9 281 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 ADI1Q9BV57 179 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 CHIAQ9BZP6 476 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 PKIBQ9C010 78 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 CHST5Q9GZS9 411 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 SLC7A11Q9UPY5 501 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 PCDHGB1Q9Y5G3 927 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 GMPPBQ9Y5P6 360 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 POMT1Q9Y6A1 747 aa8.36□□□□□ -1.07
SF3A3-204ENST00000462258 FAM230AA0A1W2PPH8 454 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 DAPL1A0PJW8 107 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 RFPL4AA6NLU0 287 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 RFPL4AL1F8VTS6 287 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 RNASEK-C17orf49H0YIS7 233 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 J3QRE1 110 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 M0R1W7 72 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 SLC1A7O00341 560 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 SLC16A6O15403 523 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 NOS1APO75052 506 aaPredicted RBP8.35□□□□□ -1.07
SF3A3-204ENST00000462258 EEF1B2P24534 225 aaKnown RBP8.35□□□□□ -1.07
SF3A3-204ENST00000462258 DLX1P56177 255 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 ACTA2P62736 377 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 ACTG2P63267 376 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 IL24Q13007 206 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 BLMHQ13867 455 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 CNN3Q15417 329 aaKnown RBP8.35□□□□□ -1.07
SF3A3-204ENST00000462258 NCR3LG1Q68D85 454 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 C16orf87Q6PH81 154 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 FIP1L1Q6UN15 594 aaKnown RBP8.35□□□□□ -1.07
SF3A3-204ENST00000462258 LDLRAD3Q86YD5 345 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 ENTHD1Q8IYW4 607 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 FAM185AQ8N0U4 392 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 PQLC1Q8N2U9 271 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 ZNF561Q8N587 486 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 CD177Q8N6Q3 437 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 OR2G2Q8NGZ5 317 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 ZNF747Q9BV97 191 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 METTL8Q9H825 291 aaKnown RBP8.35□□□□□ -1.07
SF3A3-204ENST00000462258 UNKLQ9H9P5 680 aaKnown RBP8.35□□□□□ -1.07
SF3A3-204ENST00000462258 HES4Q9HCC6 221 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 S100A14Q9HCY8 104 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 C19orf12Q9NSK7 152 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 AASSQ9UDR5 926 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 OR14J1Q9UGF5 321 aa8.35□□□□□ -1.07
SF3A3-204ENST00000462258 DSCAML1Q8TD84 2053 aa8.34□□□□□ -1.07
SF3A3-204ENST00000462258 IGKV1-27A0A075B6S5 117 aa8.34□□□□□ -1.07
SF3A3-204ENST00000462258 FAM181BA6NEQ2 426 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms