RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 S100A5P33763 92 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 UGT2B10P36537 528 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 IFNGR2P38484 337 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 CTRLP40313 264 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 OPRD1P41143 372 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 MAP2K4P45985 399 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 OR1E2P47887 323 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 GSSP48637 474 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 DAP3P51398 398 aaKnown RBP2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 XKP51811 444 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 NCBP2P52298 156 aaKnown RBP eCLIP2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 ARFIP1P53367 373 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 CRISP3P54108 245 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 STXBP1P61764 594 aaKnown RBP2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 RPS21P63220 83 aaKnown RBP2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 CSNK1G2P78368 415 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 AQP6Q13520 282 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 C1orf61Q13536 156 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 KRR1Q13601 381 aaKnown RBP2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 GANABQ14697 944 aaKnown RBP2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 SPCS2Q15005 226 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 IRF4Q15306 451 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 MLIPQ5VWP3 458 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 NIPAL1Q6NVV3 410 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 TNFAIP8L2Q6P589 184 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 CASP12Q6UXS9 341 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 C6orf120Q7Z4R8 191 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 OR2L13Q8N349 312 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 C2orf73Q8N5S3 287 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 C20orf203Q8NBC4 194 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 OR9Q1Q8NGQ5 310 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 OR2L8Q8NGY9 312 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 APH1BQ8WW43 257 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 THRSPQ92748 146 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 SLC38A4Q969I6 547 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 EXOSC8Q96B26 276 aaKnown RBP2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 TM4SF18Q96CE8 201 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 YIPF6Q96EC8 236 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 ZHX1-C8orf76Q96EF9 292 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 PDXPQ96GD0 296 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 SLC35E1Q96K37 410 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 PRAP1Q96NZ9 151 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 COL21A1Q96P44 957 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 UCK2Q9BZX2 261 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 ROGDIQ9GZN7 287 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 DCSTAMPQ9H295 470 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 SPNS1Q9H2V7 528 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 NMNAT1Q9HAN9 279 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 RAB18Q9NP72 206 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 MRPS30Q9NP92 439 aaKnown RBP2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 FBXO8Q9NRD0 319 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 IMP3Q9NV31 184 aaKnown RBP2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 NUDT15Q9NV35 164 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 RHBDL2Q9NX52 303 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 LYARQ9NX58 379 aaKnown RBP2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 CALML5Q9NZT1 146 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 CCDC59Q9P031 241 aaKnown RBP2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 KIF25Q9UIL4 384 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 PHF11Q9UIL8 331 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 SCML1Q9UN30 329 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 ERGIC3Q9Y282 383 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 CDH10Q9Y6N8 788 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 NUP214P35658 2090 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 TRPM6Q9BX84 2022 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 MYO7AQ13402 2215 aa2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 A0A0A6YYD5 115 aa2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 PNMA8CA0A1B0GUJ8 204 aa2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 A0A1W2PPV9 198 aa2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 ISPDA4D126 451 aa2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 EFCAB9A8MZ26 197 aa2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 H3BN98 237 aa2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 HMGN4O00479 90 aa2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 MYL12BO14950 172 aa2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 CASC3O15234 703 aaKnown RBP2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 ZW10O43264 779 aa2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 ERI3O43414 337 aaKnown RBP2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 TRAF3IP2O43734 574 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 WBP4O75554 376 aaKnown RBP2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 GCM2O75603 506 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 C1QCP02747 245 aa2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 SLC35G6P0C7Q6 338 aa2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 OR12D1P0DN82 309 aa2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 CSNK2A2P19784 350 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 GSTM3P21266 225 aa2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 MDKP21741 143 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 PSMB5P28074 263 aa2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 LAP3P28838 519 aa2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 CD40LGP29965 261 aa2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 GDI1P31150 447 aa2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 TGFBR2P37173 567 aa2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 CCT3P49368 545 aaKnown RBP2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 ZNF133P52736 654 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 CRISP1P54107 249 aa2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 VBP1P61758 197 aa2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 NCS1P62166 190 aa2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 RPS15AP62244 130 aaKnown RBP2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 SNRPGP62308 76 aaKnown RBP2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 LSM3P62310 102 aaKnown RBP2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 PRDX1Q06830 199 aaKnown RBP2.96□□□□□ -1.94
HMGB3P6-201ENST00000444896 ILKQ13418 452 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms