RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 RBM4BQ9BQ04 359 aaKnown RBP13.93□□□□□ -0.18
CPSF4-203ENST00000430038 DPAGT1Q9H3H5 408 aa13.93□□□□□ -0.18
CPSF4-203ENST00000430038 C16orf95Q9H693 158 aa13.93□□□□□ -0.18
CPSF4-203ENST00000430038 VPREB3Q9UKI3 123 aa13.93□□□□□ -0.18
CPSF4-203ENST00000430038 A0A1W2PQ09 198 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 PQLC2LA1A4F0 135 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 OR5B21A6NL26 309 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 F8VVB4 439 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 F8VWA3 439 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 H3BSH0 61 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 TSPAN9O75954 239 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 PGA5P0DJD9 388 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 HOXB6P17509 224 aaKnown RBP13.92□□□□□ -0.18
CPSF4-203ENST00000430038 HAAOP46952 286 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 ESRRGP62508 458 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 GUCA2AQ02747 115 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 BNIP1Q12981 228 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 ATP6AP1Q15904 470 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 OCLNQ16625 522 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 TMEM200BQ69YZ2 307 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 SLC35E4Q6ICL7 350 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 THAP5Q7Z6K1 395 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 ANGPTL5Q86XS5 388 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 OR4M1Q8NGD0 313 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 ZNF671Q8TAW3 534 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 TMEM163Q8TC26 289 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 ASB17Q8WXJ9 295 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 RNF166Q96A37 237 aaPredicted RBP13.92□□□□□ -0.18
CPSF4-203ENST00000430038 METTL8Q9H825 291 aaKnown RBP13.92□□□□□ -0.18
CPSF4-203ENST00000430038 ENPP5Q9UJA9 477 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 OR52A1Q9UKL2 312 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 SIGLEC9Q9Y336 463 aa13.92□□□□□ -0.18
CPSF4-203ENST00000430038 LOC110117498-PIK3R3F6TDL0 507 aa13.91□□□□□ -0.18
CPSF4-203ENST00000430038 APOL3O95236 402 aa13.91□□□□□ -0.18
CPSF4-203ENST00000430038 TSPAN15O95858 294 aa13.91□□□□□ -0.18
CPSF4-203ENST00000430038 ATP6V1B1P15313 513 aa13.91□□□□□ -0.18
CPSF4-203ENST00000430038 PRDX2P32119 198 aa13.91□□□□□ -0.18
CPSF4-203ENST00000430038 MIDNQ504T8 468 aa13.91□□□□□ -0.18
CPSF4-203ENST00000430038 PDLIM3Q53GG5 364 aaPredicted RBP13.91□□□□□ -0.18
CPSF4-203ENST00000430038 ZNF684Q5T5D7 378 aa13.91□□□□□ -0.18
CPSF4-203ENST00000430038 ZBTB37Q5TC79 503 aa13.91□□□□□ -0.18
CPSF4-203ENST00000430038 LCN1P1Q5VSP4 162 aa13.91□□□□□ -0.18
CPSF4-203ENST00000430038 NXNL2Q5VZ03 156 aa13.91□□□□□ -0.18
CPSF4-203ENST00000430038 CRIP3Q6Q6R5 217 aa13.91□□□□□ -0.18
CPSF4-203ENST00000430038 GDPGP1Q6ZNW5 385 aa13.91□□□□□ -0.18
CPSF4-203ENST00000430038 FAM185AQ8N0U4 392 aa13.91□□□□□ -0.18
CPSF4-203ENST00000430038 PIFOQ8TCI5 191 aa13.91□□□□□ -0.18
CPSF4-203ENST00000430038 DNAJC9Q8WXX5 260 aa13.91□□□□□ -0.18
CPSF4-203ENST00000430038 TBX5Q99593 518 aa13.91□□□□□ -0.18
CPSF4-203ENST00000430038 HES4Q9HCC6 221 aa13.91□□□□□ -0.18
CPSF4-203ENST00000430038 KRT84Q9NSB2 600 aa13.91□□□□□ -0.18
CPSF4-203ENST00000430038 GTF2A1LQ9UNN4 478 aa13.91□□□□□ -0.18
CPSF4-203ENST00000430038 TMEM14AQ9Y6G1 99 aa13.91□□□□□ -0.18
CPSF4-203ENST00000430038 R4GMQ9 66 aa13.91□□□□□ -0.18
CPSF4-203ENST00000430038 IGKV1-27A0A075B6S5 117 aa13.9□□□□□ -0.18
CPSF4-203ENST00000430038 MEX3AA1L020 520 aaKnown RBP13.9□□□□□ -0.18
CPSF4-203ENST00000430038 G3V2T6 193 aa13.9□□□□□ -0.18
CPSF4-203ENST00000430038 DYNC1I1O14576 645 aa13.9□□□□□ -0.18
CPSF4-203ENST00000430038 NOS1APO75052 506 aaPredicted RBP13.9□□□□□ -0.18
CPSF4-203ENST00000430038 CCL3L1P16619 93 aa13.9□□□□□ -0.18
CPSF4-203ENST00000430038 EEF1B2P24534 225 aaKnown RBP13.9□□□□□ -0.18
CPSF4-203ENST00000430038 ERVK11-1P61568 191 aa13.9□□□□□ -0.18
CPSF4-203ENST00000430038 ZNF273Q14593 569 aa13.9□□□□□ -0.18
CPSF4-203ENST00000430038 ODF4Q2M2E3 257 aa13.9□□□□□ -0.18
CPSF4-203ENST00000430038 ZNF829Q3KNS6 432 aaPredicted RBP13.9□□□□□ -0.18
CPSF4-203ENST00000430038 CLVS2Q5SYC1 327 aa13.9□□□□□ -0.18
CPSF4-203ENST00000430038 ASRGL1Q7L266 308 aa13.9□□□□□ -0.18
CPSF4-203ENST00000430038 BEND2Q8NDZ0 799 aa13.9□□□□□ -0.18
CPSF4-203ENST00000430038 OR51G2Q8NGK0 314 aa13.9□□□□□ -0.18
CPSF4-203ENST00000430038 LRTOMTQ8WZ04 291 aa13.9□□□□□ -0.18
CPSF4-203ENST00000430038 NRIP2Q9BQI9 281 aa13.9□□□□□ -0.18
CPSF4-203ENST00000430038 TEX12Q9BXU0 123 aa13.9□□□□□ -0.18
CPSF4-203ENST00000430038 PPA2Q9H2U2 334 aa13.9□□□□□ -0.18
CPSF4-203ENST00000430038 CLN6Q9NWW5 311 aa13.9□□□□□ -0.18
CPSF4-203ENST00000430038 RASL12Q9NYN1 266 aa13.9□□□□□ -0.18
CPSF4-203ENST00000430038 KIAA2026Q5HYC2 2103 aa13.9□□□□□ -0.18
CPSF4-203ENST00000430038 TET2Q6N021 2002 aaPredicted RBP13.9□□□□□ -0.18
CPSF4-203ENST00000430038 A0A1W2PQL4 384 aaPredicted RBP13.89□□□□□ -0.19
CPSF4-203ENST00000430038 H0YAE9 185 aa13.89□□□□□ -0.19
CPSF4-203ENST00000430038 H3BUX3 64 aa13.89□□□□□ -0.19
CPSF4-203ENST00000430038 J3QT63 122 aa13.89□□□□□ -0.19
CPSF4-203ENST00000430038 ANGPTL7O43827 346 aa13.89□□□□□ -0.19
CPSF4-203ENST00000430038 RPP14O95059 124 aaKnown RBP13.89□□□□□ -0.19
CPSF4-203ENST00000430038 MPZP25189 248 aa13.89□□□□□ -0.19
CPSF4-203ENST00000430038 DLX6P56179 175 aa13.89□□□□□ -0.19
CPSF4-203ENST00000430038 EGR3Q06889 387 aa13.89□□□□□ -0.19
CPSF4-203ENST00000430038 ACSM1Q08AH1 577 aa13.89□□□□□ -0.19
CPSF4-203ENST00000430038 UBE2V2Q15819 145 aa13.89□□□□□ -0.19
CPSF4-203ENST00000430038 LY6EQ16553 131 aa13.89□□□□□ -0.19
CPSF4-203ENST00000430038 LDLRAD2Q5SZI1 272 aa13.89□□□□□ -0.19
CPSF4-203ENST00000430038 DYNAPQ8N1N2 210 aa13.89□□□□□ -0.19
CPSF4-203ENST00000430038 UBE2FQ969M7 185 aa13.89□□□□□ -0.19
CPSF4-203ENST00000430038 CIB1Q99828 191 aa13.89□□□□□ -0.19
CPSF4-203ENST00000430038 SSX3Q99909 188 aa13.89□□□□□ -0.19
CPSF4-203ENST00000430038 GABARAPL1Q9H0R8 117 aa13.89□□□□□ -0.19
CPSF4-203ENST00000430038 MEGF9Q9H1U4 602 aa13.89□□□□□ -0.19
CPSF4-203ENST00000430038 CAB39Q9Y376 341 aaPredicted RBP13.89□□□□□ -0.19
CPSF4-203ENST00000430038 TRBV23-1A0A0A0MS06 115 aa13.88□□□□□ -0.19
CPSF4-203ENST00000430038 DLGAP1O14490 977 aa13.88□□□□□ -0.19
CPSF4-203ENST00000430038 CCL1P22362 96 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms