RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 SMIM21Q3B7S5 101 aa17.08■□□□□ 0.32
HSPG2-205ENST00000427897 CDONQ4KMG0 1287 aa17.08■□□□□ 0.32
HSPG2-205ENST00000427897 RUSC1-AS1Q66K80 236 aa17.08■□□□□ 0.32
HSPG2-205ENST00000427897 FGFRL1Q8N441 504 aa17.08■□□□□ 0.32
HSPG2-205ENST00000427897 DHRSXQ8N5I4 330 aa17.08■□□□□ 0.32
HSPG2-205ENST00000427897 TMEM185AQ8NFB2 350 aa17.08■□□□□ 0.32
HSPG2-205ENST00000427897 TRMT10AQ8TBZ6 339 aaKnown RBP17.08■□□□□ 0.32
HSPG2-205ENST00000427897 NRG4Q8WWG1 115 aa17.08■□□□□ 0.32
HSPG2-205ENST00000427897 CYGBQ8WWM9 190 aa17.08■□□□□ 0.32
HSPG2-205ENST00000427897 SOX21Q9Y651 276 aaPredicted RBP17.08■□□□□ 0.32
HSPG2-205ENST00000427897 KPTNQ9Y664 436 aa17.08■□□□□ 0.32
HSPG2-205ENST00000427897 CENPVL3A0A0U1RRI6 287 aa17.07■□□□□ 0.32
HSPG2-205ENST00000427897 ANKRD61A6NGH8 418 aa17.07■□□□□ 0.32
HSPG2-205ENST00000427897 J3QT63 122 aa17.07■□□□□ 0.32
HSPG2-205ENST00000427897 NXPH2O95156 264 aa17.07■□□□□ 0.32
HSPG2-205ENST00000427897 TFF1P04155 84 aa17.07■□□□□ 0.32
HSPG2-205ENST00000427897 ACAA1P09110 424 aaPredicted RBP17.07■□□□□ 0.32
HSPG2-205ENST00000427897 OCM2P0CE71 109 aa17.07■□□□□ 0.32
HSPG2-205ENST00000427897 OCMP0CE72 109 aaPredicted RBP17.07■□□□□ 0.32
HSPG2-205ENST00000427897 UBCP0CG48 685 aaKnown RBP17.07■□□□□ 0.32
HSPG2-205ENST00000427897 PSG2P11465 335 aa17.07■□□□□ 0.32
HSPG2-205ENST00000427897 ZNF85Q03923 595 aa17.07■□□□□ 0.32
HSPG2-205ENST00000427897 FOXL1Q12952 345 aa17.07■□□□□ 0.32
HSPG2-205ENST00000427897 BLMHQ13867 455 aa17.07■□□□□ 0.32
HSPG2-205ENST00000427897 DEFB112Q30KQ8 113 aa17.07■□□□□ 0.32
HSPG2-205ENST00000427897 SLC25A30Q5SVS4 291 aa17.07■□□□□ 0.32
HSPG2-205ENST00000427897 PDZD9Q8IXQ8 264 aa17.07■□□□□ 0.32
HSPG2-205ENST00000427897 POC1AQ8NBT0 407 aa17.07■□□□□ 0.32
HSPG2-205ENST00000427897 ANGPTL6Q8NI99 470 aa17.07■□□□□ 0.32
HSPG2-205ENST00000427897 NPRL2Q8WTW4 380 aa17.07■□□□□ 0.32
HSPG2-205ENST00000427897 GAFA1Q96PS6 74 aa17.07■□□□□ 0.32
HSPG2-205ENST00000427897 TBX15Q96SF7 602 aa17.07■□□□□ 0.32
HSPG2-205ENST00000427897 DCTN5Q9BTE1 182 aa17.07■□□□□ 0.32
HSPG2-205ENST00000427897 SIRPDQ9H106 197 aa17.07■□□□□ 0.32
HSPG2-205ENST00000427897 TNFRSF19Q9NS68 423 aa17.07■□□□□ 0.32
HSPG2-205ENST00000427897 ACOXLQ9NUZ1 547 aa17.07■□□□□ 0.32
HSPG2-205ENST00000427897 MDFIC2A0A1B0GVS7 189 aa17.06■□□□□ 0.32
HSPG2-205ENST00000427897 H0YAE9 185 aa17.06■□□□□ 0.32
HSPG2-205ENST00000427897 SIGLEC5O15389 551 aa17.06■□□□□ 0.32
HSPG2-205ENST00000427897 GATBO75879 557 aaKnown RBP17.06■□□□□ 0.32
HSPG2-205ENST00000427897 MMP9P14780 707 aa17.06■□□□□ 0.32
HSPG2-205ENST00000427897 IL18R1Q13478 541 aa17.06■□□□□ 0.32
HSPG2-205ENST00000427897 DGUOKQ16854 277 aa17.06■□□□□ 0.32
HSPG2-205ENST00000427897 TMEM244Q5VVB8 128 aa17.06■□□□□ 0.32
HSPG2-205ENST00000427897 VMO1Q7Z5L0 202 aa17.06■□□□□ 0.32
HSPG2-205ENST00000427897 ACBD7Q8N6N7 88 aa17.06■□□□□ 0.32
HSPG2-205ENST00000427897 SETD9Q8NE22 299 aa17.06■□□□□ 0.32
HSPG2-205ENST00000427897 DMRTB1Q96MA1 342 aa17.06■□□□□ 0.32
HSPG2-205ENST00000427897 FAM96BQ9Y3D0 163 aa17.06■□□□□ 0.32
HSPG2-205ENST00000427897 IGHV1-69DA0A0B4J2H0 117 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 PQLC2LA1A4F0 135 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 J3QLW9 94 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 SLC1A7O00341 560 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 HOXA3O43365 443 aaPredicted RBP17.05■□□□□ 0.32
HSPG2-205ENST00000427897 SYNGR1O43759 233 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 FCN3O75636 299 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 IGHV1-69P01742 117 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 CRYBA1P05813 215 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 HTR1AP08908 422 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 SELLP14151 372 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 ZNF19P17023 458 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 AMY2BP19961 511 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 CCL1P22362 96 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 CAPGP40121 348 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 ACTA2P62736 377 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 ACTG2P63267 376 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 SLC9A3R2Q15599 337 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 TMEM42Q69YG0 159 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 ACP7Q6ZNF0 438 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 ANGPTL5Q86XS5 388 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 ZNRF1Q8ND25 227 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 LY6G5BQ8NDX9 201 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 ZNF488Q96MN9 340 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 NOX4Q9NPH5 578 aa17.05■□□□□ 0.32
HSPG2-205ENST00000427897 CAB39Q9Y376 341 aaPredicted RBP17.05■□□□□ 0.32
HSPG2-205ENST00000427897 DNHD1Q96M86 4753 aa17.04■□□□□ 0.32
HSPG2-205ENST00000427897 RFPL4AA6NLU0 287 aa17.04■□□□□ 0.32
HSPG2-205ENST00000427897 RFPL4AL1F8VTS6 287 aa17.04■□□□□ 0.32
HSPG2-205ENST00000427897 RNASE1P07998 156 aaKnown RBP17.04■□□□□ 0.32
HSPG2-205ENST00000427897 ZNF20P17024 532 aa17.04■□□□□ 0.32
HSPG2-205ENST00000427897 EEF1B2P24534 225 aaKnown RBP17.04■□□□□ 0.32
HSPG2-205ENST00000427897 CFPP27918 469 aa17.04■□□□□ 0.32
HSPG2-205ENST00000427897 HSPA13P48723 471 aa17.04■□□□□ 0.32
HSPG2-205ENST00000427897 FUT6P51993 359 aa17.04■□□□□ 0.32
HSPG2-205ENST00000427897 CAV3P56539 151 aa17.04■□□□□ 0.32
HSPG2-205ENST00000427897 ADARB1P78563 741 aaKnown RBP17.04■□□□□ 0.32
HSPG2-205ENST00000427897 CNN3Q15417 329 aaKnown RBP17.04■□□□□ 0.32
HSPG2-205ENST00000427897 Q6ZSR3 168 aa17.04■□□□□ 0.32
HSPG2-205ENST00000427897 FAM185AQ8N0U4 392 aa17.04■□□□□ 0.32
HSPG2-205ENST00000427897 BATF2Q8N1L9 274 aa17.04■□□□□ 0.32
HSPG2-205ENST00000427897 PRSS35Q8N3Z0 413 aa17.04■□□□□ 0.32
HSPG2-205ENST00000427897 KIR3DL3Q8N743 410 aa17.04■□□□□ 0.32
HSPG2-205ENST00000427897 C10orf35Q96D05 121 aa17.04■□□□□ 0.32
HSPG2-205ENST00000427897 BORCS8Q96FH0 119 aa17.04■□□□□ 0.32
HSPG2-205ENST00000427897 AASSQ9UDR5 926 aa17.04■□□□□ 0.32
HSPG2-205ENST00000427897 OR14J1Q9UGF5 321 aa17.04■□□□□ 0.32
HSPG2-205ENST00000427897 IGKV1D-17A0A075B6S4 117 aa17.03■□□□□ 0.32
HSPG2-205ENST00000427897 LOC107986453A0A1B0GWG9 222 aa17.03■□□□□ 0.32
HSPG2-205ENST00000427897 CLDN34H7C241 214 aa17.03■□□□□ 0.32
HSPG2-205ENST00000427897 INMTO95050 263 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms