RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 PPBPP02775 128 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 RPN2P04844 631 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 EIF4EP06730 217 aaKnown RBP3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 FBP1P09467 338 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 OCMP0CE72 109 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 PGA4P0DJD7 388 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 PGA3P0DJD8 388 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 HLA-GP17693 338 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 PSMC3P17980 439 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 RAB5AP20339 215 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 KRTAP5-9P26371 169 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 CDKN2BP42772 138 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 AP2S1P53680 142 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 TCP10Q12799 353 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 EIF4EBP2Q13542 120 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 RSPO1Q2MKA7 263 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 RNF212Q495C1 297 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 ZFP1Q6P2D0 407 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 FBXW12Q6X9E4 464 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 TMPRSS11AQ6ZMR5 421 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 MRPL55Q7Z7F7 128 aaKnown RBP3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 ZNF584Q8IVC4 421 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 TMEM35BQ8NCS4 154 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 OR10W1Q8NGF6 305 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 OR2D3Q8NGH3 330 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 OR11L1Q8NGX0 322 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 RNASE11Q8TAA1 199 aaKnown RBP3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 DYNC2LI1Q8TCX1 351 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 RDH5Q92781 318 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 IL22RA2Q969J5 263 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 GLT1D1Q96MS3 346 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 RILPQ96NA2 401 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 SERPINB11Q96P15 392 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 EBNA1BP2Q99848 306 aaKnown RBP3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 C2orf88Q9BSF0 95 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 CHRNA10Q9GZZ6 450 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 ARMC7Q9H6L4 198 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 PLEKHA1Q9HB21 404 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 DDX19AQ9NUU7 478 aaKnown RBP3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 NECAP2Q9NVZ3 263 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 NUFIP1Q9UHK0 495 aaKnown RBP3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 CD84Q9UIB8 345 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 SLC22A13Q9Y226 551 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 ARHGEF10O15013 1369 aa3.34□□□□□ -1.88
HMGB1P13-201ENST00000406019 KIAA0232Q92628 1395 aa3.34□□□□□ -1.88
HMGB1P13-201ENST00000406019 JCADQ9P266 1359 aa3.34□□□□□ -1.88
HMGB1P13-201ENST00000406019 KIAA1107Q9UPP5 1409 aa3.34□□□□□ -1.88
HMGB1P13-201ENST00000406019 CROCCQ5TZA2 2017 aa3.34□□□□□ -1.88
HMGB1P13-201ENST00000406019 ZNFX1Q9P2E3 1918 aaKnown RBP3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 IGKV6D-41A0A0C4DH26 115 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 CIB4A0PJX0 185 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 POP7O75817 140 aaKnown RBP3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 ZMPSTE24O75844 475 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 RCBTB2O95199 551 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 SERPINA1P01009 418 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 IGKV3-15P01624 115 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 IFNA16P05015 189 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 PGAM1P18669 254 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 S100A7P31151 101 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 KDELR2P33947 212 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 PFN2P35080 140 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 NMUP48645 174 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 CDK9P50750 372 aaKnown RBP3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 UCNP55089 124 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 RANP62826 216 aaKnown RBP3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 TFDP2Q14188 446 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 TMEM183BQ1AE95 376 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 PHF13Q86YI8 300 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 TMEM183AQ8IXX5 376 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 SYS1Q8N2H4 156 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 CBR4Q8N4T8 237 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 UBL4BQ8N7F7 174 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 ZNF75AQ96N20 296 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 ZNF681Q96N22 645 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 NAPGQ99747 312 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 NIPSNAP1Q9BPW8 284 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 RSG1Q9BU20 258 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 ZNF430Q9H8G1 570 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 HRASLSQ9HDD0 168 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 SDHAF2Q9NX18 166 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 DEC1Q9P2X7 70 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 STOML2Q9UJZ1 356 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 PSG11Q9UQ72 335 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 MRC2Q9UBG0 1479 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 MEGF6O75095 1541 aa3.33□□□□□ -1.88
HMGB1P13-201ENST00000406019 AK9Q5TCS8 1911 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 PVALEFA0A1B0GWK0 134 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 HACD1B0YJ81 288 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 H7C417 338 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 M0QZ92 97 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 PSMD12O00232 456 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 CST8O60676 142 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 PSMG1O95456 288 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 LDOC1O95751 146 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 CYB5R3P00387 301 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 CD5P06127 495 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 FAM228BP0C875 321 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 ERGP11308 486 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 GZMHP20718 246 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 BGNP21810 368 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms