RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 CENPXA8MT69 81 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 ZNF878C9JN71 531 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 C15orf65H3BRN8 121 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 CASC3O15234 703 aaKnown RBP1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 TGFBR2P37173 567 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 HTR2BP41595 481 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 TNFRSF9Q07011 255 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 ST3GAL4Q11206 333 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 MLIPQ5VWP3 458 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 ZNF470Q6ECI4 717 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 LINC00336Q6ZUF6 198 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 FA2HQ7L5A8 372 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 MRPL21Q7Z2W9 205 aaKnown RBP1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 OR2W3Q7Z3T1 314 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 TMCO2Q7Z6W1 182 aaPredicted RBP1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 RPRMLQ8N4K4 120 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 TRAM1L1Q8N609 369 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 TMEM234Q8WY98 164 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 ING5Q8WYH8 240 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 RNF170Q96K19 258 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 DERL3Q96Q80 235 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 IL22Q9GZX6 179 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 NAA50Q9GZZ1 169 aaKnown RBP1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 FAM60AQ9NP50 221 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 ABCB9Q9NP78 766 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 PARP11Q9NR21 331 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 CA10Q9NS85 328 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 PEF1Q9UBV8 284 aaKnown RBP1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 CRCT1Q9UGL9 99 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 MMACHCQ9Y4U1 282 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 TRAPPC1Q9Y5R8 145 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 R4GN34 69 aa1.22□□□□□ -2.21
RNU6-48P-201ENST00000384161 ELP1O95163 1332 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 SETD1AO15047 1707 aaKnown RBP1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 BAZ1BQ9UIG0 1483 aaKnown RBP1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 A0A1B0GTQ1 180 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 ZNF99A8MXY4 864 aaPredicted RBP1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 H0YIV9 168 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 H7C2Y5 167 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 J3QRE1 110 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 DFFAO00273 331 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 TRDMT1O14717 391 aaKnown RBP1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 SIVA1O15304 175 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 GCGP01275 180 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 KLK1P06870 262 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 RALBP11234 206 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 PMCHP20382 165 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 GABRR2P28476 465 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 TUFMP49411 452 aaKnown RBP1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 TAS2R60P59551 318 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 KRTAP12-3P60328 96 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 KRTAP12-4P60329 112 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 ATP6V0D1P61421 351 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 GBE1Q04446 702 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 SPAG1Q07617 926 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 LAMTOR4Q0VGL1 99 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 CDNFQ49AH0 187 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 PYDC2Q56P42 97 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 FAM231DQ6ZW35 169 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 SLC35D2Q76EJ3 337 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 ITPRIPQ8IWB1 547 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 C3orf22Q8N5N4 141 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 ZDHHC22Q8N966 263 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 PROKR2Q8NFJ6 384 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 OR4D6Q8NGJ1 314 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 OR4C13Q8NGP0 309 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 OR8K3Q8NH51 312 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 FAM57AQ8TBR7 257 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 PIH1D2Q8WWB5 315 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 TSNAXQ99598 290 aaKnown RBP1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 ZNF649Q9BS31 505 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 C8orf33Q9H7E9 229 aaPredicted RBP1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 PRSS16Q9NQE7 514 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 TMEM100Q9NV29 134 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 PRO0628Q9UI54 55 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 SLC7A11Q9UPY5 501 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 PPIL1Q9Y3C6 166 aa1.21□□□□□ -2.22
RNU6-48P-201ENST00000384161 ITGB4P16144 1822 aa1.2□□□□□ -2.22
RNU6-48P-201ENST00000384161 AQRO60306 1485 aaKnown RBP eCLIP1.2□□□□□ -2.22
RNU6-48P-201ENST00000384161 IGLL5B9A064 214 aa1.2□□□□□ -2.22
RNU6-48P-201ENST00000384161 H3BQ85 93 aa1.2□□□□□ -2.22
RNU6-48P-201ENST00000384161 J3QT63 122 aa1.2□□□□□ -2.22
RNU6-48P-201ENST00000384161 GATCO43716 136 aaKnown RBP1.2□□□□□ -2.22
RNU6-48P-201ENST00000384161 SYNGR2O43760 224 aa1.2□□□□□ -2.22
RNU6-48P-201ENST00000384161 NDUFS5O43920 106 aa1.2□□□□□ -2.22
RNU6-48P-201ENST00000384161 CXorf1O96002 111 aa1.2□□□□□ -2.22
RNU6-48P-201ENST00000384161 STAG3L3P0CL85 134 aa1.2□□□□□ -2.22
RNU6-48P-201ENST00000384161 PTHLHP12272 177 aa1.2□□□□□ -2.22
RNU6-48P-201ENST00000384161 MSR1P21757 451 aa1.2□□□□□ -2.22
RNU6-48P-201ENST00000384161 CSKP41240 450 aa1.2□□□□□ -2.22
RNU6-48P-201ENST00000384161 PSMD4P55036 377 aaKnown RBP1.2□□□□□ -2.22
RNU6-48P-201ENST00000384161 CLDN8P56748 225 aa1.2□□□□□ -2.22
RNU6-48P-201ENST00000384161 DAOAP59103 153 aa1.2□□□□□ -2.22
RNU6-48P-201ENST00000384161 PSMC5P62195 406 aa1.2□□□□□ -2.22
RNU6-48P-201ENST00000384161 PAFAH1B2P68402 229 aa1.2□□□□□ -2.22
RNU6-48P-201ENST00000384161 LCN2P80188 198 aa1.2□□□□□ -2.22
RNU6-48P-201ENST00000384161 TSC22D1Q15714 1073 aa1.2□□□□□ -2.22
RNU6-48P-201ENST00000384161 TOMM34Q15785 309 aaPredicted RBP1.2□□□□□ -2.22
RNU6-48P-201ENST00000384161 LINC00303Q3SY05 128 aa1.2□□□□□ -2.22
RNU6-48P-201ENST00000384161 TTC32Q5I0X7 151 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms