RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 CCDC126Q96EE4 140 aa4.3□□□□□ -1.72
ECHDC1-204ENST00000368292 SDSLQ96GA7 329 aa4.3□□□□□ -1.72
ECHDC1-204ENST00000368292 CAPZA3Q96KX2 299 aa4.3□□□□□ -1.72
ECHDC1-204ENST00000368292 ALKBH3Q96Q83 286 aaPredicted RBP4.3□□□□□ -1.72
ECHDC1-204ENST00000368292 S1PR3Q99500 378 aa4.3□□□□□ -1.72
ECHDC1-204ENST00000368292 AGPAT1Q99943 283 aa4.3□□□□□ -1.72
ECHDC1-204ENST00000368292 TXNIPQ9H3M7 391 aa4.3□□□□□ -1.72
ECHDC1-204ENST00000368292 WFDC1Q9HC57 220 aa4.3□□□□□ -1.72
ECHDC1-204ENST00000368292 SPANXA1Q9NS26 97 aa4.3□□□□□ -1.72
ECHDC1-204ENST00000368292 TMEM181Q9P2C4 612 aa4.3□□□□□ -1.72
ECHDC1-204ENST00000368292 CD84Q9UIB8 345 aa4.3□□□□□ -1.72
ECHDC1-204ENST00000368292 FZR1Q9UM11 496 aa4.3□□□□□ -1.72
ECHDC1-204ENST00000368292 WDR83OSQ9Y284 106 aa4.3□□□□□ -1.72
ECHDC1-204ENST00000368292 UFC1Q9Y3C8 167 aa4.3□□□□□ -1.72
ECHDC1-204ENST00000368292 HS3ST3B1Q9Y662 390 aa4.3□□□□□ -1.72
ECHDC1-204ENST00000368292 MYH10P35580 1976 aa4.3□□□□□ -1.72
ECHDC1-204ENST00000368292 CUBNO60494 3623 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 PKDREJQ9NTG1 2253 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 RP1P56715 2156 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 A0A0B4J2E0 115 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 A0A0D9SFI3 127 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 GLYATL1P3A0A0U1RQE8 302 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 A0A1B0GX12 115 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 IGLON5A6NGN9 336 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 E5RGE8 158 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 TAPBPO15533 448 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 RGS5O15539 181 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 CYB5BO43169 146 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 CHST10O43529 356 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 PDE6DO43924 150 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 TPST1O60507 370 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 EIF4E2O60573 245 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 VENTXO95231 258 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 GPR75O95800 540 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 IFNA1P01562 189 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 CRYAAP02489 173 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 EDN1P05305 212 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 BPGMP07738 259 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 ACSM4P0C7M7 580 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 SLC35G4P0C7Q5 338 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 IRF2P14316 349 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 NELFEP18615 380 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 PGCP20142 388 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 ALOX5APP20292 161 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 S100A7P31151 101 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 FGF9P31371 208 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 CCKARP32238 428 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 RFC3P40938 356 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 XCR1P46094 333 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 STC1P52823 247 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 PDX1P52945 283 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 CDH11P55287 796 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 KRTAP10-9P60411 292 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 BIKQ13323 160 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 OR1Q1Q15612 314 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 ZIC1Q15915 447 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 CARD16Q5EG05 197 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 ELFN2Q5R3F8 820 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 SAMD13Q5VXD3 122 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 OR52E8Q6IFG1 317 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 CASP12Q6UXS9 341 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 CYS1Q717R9 158 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 ZNF534Q76KX8 674 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 ANKRD37Q7Z713 158 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 MRPL52Q86TS9 123 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 CTAGE3PQ8IX95 158 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 CMTM1Q8IZ96 169 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 SMIM20Q8N5G0 67 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 EMC1Q8N766 993 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 C4orf32Q8N8J7 132 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 THAP8Q8NA92 274 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 AQP11Q8NBQ7 271 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 OR6K6Q8NGW6 343 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 CCDC107Q8WV48 283 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 SKA2Q8WVK7 121 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 OR8D1Q8WZ84 308 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 OR5P2Q8WZ92 322 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 RGP1Q92546 391 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 GHSRQ92847 366 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 ZNF486Q96H40 463 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 URB1-AS1Q96HZ7 61 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 OR10C1Q96KK4 312 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 GPR22Q99680 433 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 NXF5Q9H1B4 397 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 DSN1Q9H410 356 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 C5orf66Q9H5L9 145 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 FKRPQ9H9S5 495 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 RETNQ9HD89 108 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 FBXO6Q9NRD1 293 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 ZNF107Q9UII5 783 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 SLC35A3Q9Y2D2 325 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 KLHDC2Q9Y2U9 406 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 NSG2Q9Y328 171 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 U3KQA8 63 aa4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 DIDO1Q9BTC0 2240 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-204ENST00000368292 NSD1Q96L73 2696 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 TNRC6AQ8NDV7 1962 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 A0A0G2JMP0 313 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 PRSS51A0A1B0GVH4 220 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 ATP6AP2A0A1C7CYW4 349 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms