RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 NDUFAF3Q9BU61 184 aa11.87□□□□□ -0.51
RPUSD4-201ENST00000298317 TBX21Q9UL17 535 aa11.87□□□□□ -0.51
RPUSD4-201ENST00000298317 GOLT1BQ9Y3E0 138 aa11.87□□□□□ -0.51
RPUSD4-201ENST00000298317 URGCP-MRPS24S4R325 110 aa11.87□□□□□ -0.51
RPUSD4-201ENST00000298317 PTPRSQ13332 1948 aa11.87□□□□□ -0.51
RPUSD4-201ENST00000298317 ARID1BQ8NFD5 2236 aaPredicted RBP11.87□□□□□ -0.51
RPUSD4-201ENST00000298317 A8MWP6 167 aa11.87□□□□□ -0.51
RPUSD4-201ENST00000298317 ADAM10O14672 748 aa11.87□□□□□ -0.51
RPUSD4-201ENST00000298317 RRP8O43159 456 aaKnown RBP11.87□□□□□ -0.51
RPUSD4-201ENST00000298317 CYB5BO43169 146 aa11.87□□□□□ -0.51
RPUSD4-201ENST00000298317 MYOGP15173 224 aa11.87□□□□□ -0.51
RPUSD4-201ENST00000298317 ZNF25P17030 456 aaPredicted RBP11.87□□□□□ -0.51
RPUSD4-201ENST00000298317 GJA4P35212 333 aa11.87□□□□□ -0.51
RPUSD4-201ENST00000298317 POLR2HP52434 150 aaKnown RBP11.87□□□□□ -0.51
RPUSD4-201ENST00000298317 CCL20P78556 96 aa11.87□□□□□ -0.51
RPUSD4-201ENST00000298317 OR2T2Q6IF00 324 aa11.87□□□□□ -0.51
RPUSD4-201ENST00000298317 SPSB3Q6PJ21 355 aa11.87□□□□□ -0.51
RPUSD4-201ENST00000298317 BEND2Q8NDZ0 799 aa11.87□□□□□ -0.51
RPUSD4-201ENST00000298317 SSC4DQ8WTU2 575 aa11.87□□□□□ -0.51
RPUSD4-201ENST00000298317 KCNK17Q96T54 332 aa11.87□□□□□ -0.51
RPUSD4-201ENST00000298317 FRG2CA6NGY1 282 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 C17orf105B2RV13 164 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 EREGO14944 169 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 XRCC2O43543 280 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 NUDT14O95848 222 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 TRGC1P0CF51 173 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 PGCP20142 388 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 GLIPR1P48060 266 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 RND3P61587 244 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 PRR22Q8IZ63 422 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 ABHD5Q8WTS1 349 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 MVB12AQ96EY5 273 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 PACRGQ96M98 296 aaPredicted RBP11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 ZNF2Q9BSG1 426 aaPredicted RBP11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 SLCO1B1Q9Y6L6 691 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 IGKV1D-8A0A087WSZ0 117 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 NSG1A0A0A6YYJ2 146 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 FTCDNL1E5RQL4 147 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 IL11P20809 199 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 MSX1P28360 303 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 IL2RGP31785 369 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 IL13RA2Q14627 380 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 COL13A1Q5TAT6 717 aaPredicted RBP11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 SP5Q6BEB4 398 aaPredicted RBP11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 STT3BQ8TCJ2 826 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 PECRQ9BY49 303 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 TCEAL2Q9H3H9 227 aaPredicted RBP11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 MOB1AQ9H8S9 216 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 KIAA1456Q9P272 454 aa11.86□□□□□ -0.51
RPUSD4-201ENST00000298317 ARID1AO14497 2285 aa11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 ARHGEF17Q96PE2 2063 aaPredicted RBP11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 SERPINE3A8MV23 424 aa11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 AHSA1O95433 338 aa11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 DIRAS3O95661 229 aa11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 OR51T1Q8NGJ9 327 aa11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 C11orf40Q8WZ69 217 aa11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 FRZBQ92765 325 aa11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 SLC46A1Q96NT5 459 aa11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 HIST1H2BLQ99880 126 aa11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 SLC25A31Q9H0C2 315 aa11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 A0A1W2PQD3 144 aa11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 PHOX2AO14813 284 aa11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 ZNF17P17021 662 aa11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 TMEM187Q14656 261 aa11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 ZNF385CQ66K41 422 aaPredicted RBP11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 ZNF429Q86V71 674 aa11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 OOSP2Q86WS3 158 aa11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 PRSS58Q8IYP2 241 aa11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 PTPMT1Q8WUK0 201 aaPredicted RBP11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 TVP23CQ96ET8 276 aa11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 RCC1LQ96I51 464 aaKnown RBP11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 ASCL3Q9NQ33 180 aa11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 FOXD3Q9UJU5 478 aaPredicted RBP11.85□□□□□ -0.51
RPUSD4-201ENST00000298317 METTL12A8MUP2 240 aa11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 ALG1L2C9J202 215 aa11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 C9J4A7 227 aa11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 ZNF878C9JN71 531 aa11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 NPIPA5E9PKD4 350 aa11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 MS4A18H0YCH9 400 aa11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 DLEU1O43261 78 aa11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 CA11O75493 328 aa11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 HSPB1P04792 205 aaKnown RBP11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 RGS19P49795 217 aa11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 DAP3P51398 398 aaKnown RBP11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 MS4A18Q3C1V0 323 aa11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 SLC22A25Q6T423 547 aa11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 SLC35E3Q7Z769 313 aa11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 SFTPA2Q8IWL1 248 aa11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 GPR137CQ8N3F9 429 aa11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 LRTM2Q8N967 370 aa11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 ZNF248Q8NDW4 579 aa11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 RELTQ969Z4 430 aa11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 ADIPOR1Q96A54 375 aa11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 NOL4LQ96MY1 436 aaPredicted RBP11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 PADI1Q9ULC6 663 aa11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 NPIPA1Q9UND3 350 aa11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 RCL1Q9Y2P8 373 aaKnown RBP11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 XIRP2A4UGR9 3374 aa11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 CACNA1IQ9P0X4 2223 aa11.84□□□□□ -0.51
RPUSD4-201ENST00000298317 PHF3Q92576 2039 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms