RNA–Protein interactions for RNA: ENST00000289495.7

PPP1R9A-201, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-201ENST00000289495 FNDC9Q8TBE3 224 aa4.24□□□□□ -1.73
PPP1R9A-201ENST00000289495 TOMM40LQ969M1 308 aa4.24□□□□□ -1.73
PPP1R9A-201ENST00000289495 FBXO17Q96EF6 278 aa4.24□□□□□ -1.73
PPP1R9A-201ENST00000289495 ZNF75AQ96N20 296 aa4.24□□□□□ -1.73
PPP1R9A-201ENST00000289495 TM2D1Q9BX74 207 aa4.24□□□□□ -1.73
PPP1R9A-201ENST00000289495 SMOC1Q9H4F8 434 aa4.24□□□□□ -1.73
PPP1R9A-201ENST00000289495 RGCCQ9H4X1 137 aa4.24□□□□□ -1.73
PPP1R9A-201ENST00000289495 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.24□□□□□ -1.732e-6■■■■■ 37.6
PPP1R9A-201ENST00000289495 PARPBPQ9NWS1 579 aa4.24□□□□□ -1.73
PPP1R9A-201ENST00000289495 LRFN1Q9P244 771 aa4.24□□□□□ -1.73
PPP1R9A-201ENST00000289495 ANAPC10Q9UM13 185 aa4.24□□□□□ -1.73
PPP1R9A-201ENST00000289495 EDARQ9UNE0 448 aa4.24□□□□□ -1.73
PPP1R9A-201ENST00000289495 NOSIPQ9Y314 301 aaKnown RBP4.24□□□□□ -1.73
PPP1R9A-201ENST00000289495 SDK2Q58EX2 2172 aa4.24□□□□□ -1.73
PPP1R9A-201ENST00000289495 A0A0G2JMM0 328 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 A0A1W2PPB8 328 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 A0A1W2PRS3 328 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 C5orf63A6NC05 138 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 RNF222A6NCQ9 220 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 KIR3DP1A8MWS1 328 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 XRCC2O43543 280 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 SPRY1O43609 319 aaPredicted RBP4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 NRASP01111 189 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 IFNA2P01563 188 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 NAT2P11245 290 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 ATF4P18848 351 aaPredicted RBP4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 ITGA3P26006 1051 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 OTX1P32242 354 aaPredicted RBP4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 ALDH3B1P43353 468 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 SUCLG1P53597 346 aaKnown RBP4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 CLDN15P56746 228 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 HERV-K104P61576 105 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 HIST1H3AP68431 136 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 ZXDAP98168 799 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 DEFA5Q01523 94 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 CLN3Q13286 438 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 TAF9Q16594 264 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 C4orf17Q53FE4 359 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 PAN3Q58A45 887 aaKnown RBP4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 HIST2H3PS2Q5TEC6 136 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 ZNF585AQ6P3V2 769 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 MOB3CQ70IA8 216 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 HIST2H3AQ71DI3 136 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 C1QL2Q7Z5L3 287 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 FAM89BQ8N5H3 189 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 THOC3Q96J01 351 aaKnown RBP4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 C2orf50Q96LR7 162 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 TAAR9Q96RI9 348 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 ZNF2Q9BSG1 426 aaPredicted RBP4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 C5orf66Q9H5L9 145 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 BCO1Q9HAY6 547 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 ZNF286AQ9HBT8 521 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 PROK2Q9HC23 129 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 ACKR4Q9NPB9 350 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 KCNIP3Q9Y2W7 256 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 EML6Q6ZMW3 1958 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 LGALS8O00214 317 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 ADAP1O75689 374 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 MPLP40238 635 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 SRYQ05066 204 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 SIGLEC14Q08ET2 396 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 MALLQ13021 153 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 ABLIM2Q6H8Q1 611 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 ZIC4Q8N9L1 334 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 PIGCQ92535 297 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 ARL11Q969Q4 196 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 SGK3Q96BR1 496 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 ZNF442Q9H7R0 627 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 SH2D2AQ9NP31 389 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 OR2S2Q9NQN1 319 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 NECAP2Q9NVZ3 263 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 FBXO9Q9UK97 447 aaPredicted RBP4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 MCTS1Q9ULC4 181 aaKnown RBP4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 SZT2Q5T011 3432 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 NCOA6Q14686 2063 aaPredicted RBP4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 ZNF816-ZNF321PA0A0X1KG74 233 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 E9PLN8 166 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 LINC01387J3KSC0 135 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 SCGB1D2O95969 90 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 IGLV3-1P01715 115 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 FGF2P09038 288 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 PATE4P0C8F1 98 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 CNR1P21554 472 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 CCNOP22674 350 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 CRYGSP22914 178 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 ACP1P24666 158 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 FXYD4P59646 89 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 IAH1Q2TAA2 248 aaPredicted RBP4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 RNFT1Q5M7Z0 435 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 RIPPLY2Q5TAB7 128 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 PRSS54Q6PEW0 395 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 MRPL21Q7Z2W9 205 aaKnown RBP4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 NEK7Q8TDX7 302 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 MRGPRFQ96AM1 343 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 ZNF837Q96EG3 531 aaPredicted RBP4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 ZC3H10Q96K80 434 aaKnown RBP4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 Q96M66 194 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 TECTBQ96PL2 329 aa4.23□□□□□ -1.73
PPP1R9A-201ENST00000289495 OR2H1Q9GZK4 316 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms