RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 HTR3BO95264 441 aa15.57■□□□□ 0.08
VIM-201ENST00000224237 SFTPCP11686 197 aa15.57■□□□□ 0.08
VIM-201ENST00000224237 ERVS71-1P61550 626 aa15.57■□□□□ 0.08
VIM-201ENST00000224237 CALHM1Q8IU99 346 aa15.57■□□□□ 0.08
VIM-201ENST00000224237 MRPS24Q96EL2 167 aaKnown RBP15.57■□□□□ 0.08
VIM-201ENST00000224237 Q96M66 194 aa15.57■□□□□ 0.08
VIM-201ENST00000224237 IGHV2OR16-5A0A0B4J2B6 119 aa15.56■□□□□ 0.08
VIM-201ENST00000224237 TMEM8BA6NDV4 472 aa15.56■□□□□ 0.08
VIM-201ENST00000224237 OR5B21A6NL26 309 aa15.56■□□□□ 0.08
VIM-201ENST00000224237 TCRBP04435 133 aa15.56■□□□□ 0.08
VIM-201ENST00000224237 HLA-DMAP28067 261 aa15.56■□□□□ 0.08
VIM-201ENST00000224237 GPM6AP51674 278 aa15.56■□□□□ 0.08
VIM-201ENST00000224237 CCR6P51684 374 aa15.56■□□□□ 0.08
VIM-201ENST00000224237 TMEM50BP56557 158 aa15.56■□□□□ 0.08
VIM-201ENST00000224237 TAS2R19P59542 299 aa15.56■□□□□ 0.08
VIM-201ENST00000224237 ARL6IP1Q15041 203 aa15.56■□□□□ 0.08
VIM-201ENST00000224237 PNLIPRP3Q17RR3 467 aa15.56■□□□□ 0.08
VIM-201ENST00000224237 PLAC9Q5JTB6 97 aa15.56■□□□□ 0.08
VIM-201ENST00000224237 OR51F2Q8NH61 342 aa15.56■□□□□ 0.08
VIM-201ENST00000224237 OR5P3Q8WZ94 311 aa15.56■□□□□ 0.08
VIM-201ENST00000224237 VKORC1Q9BQB6 163 aa15.56■□□□□ 0.08
VIM-201ENST00000224237 ACTR6Q9GZN1 396 aa15.56■□□□□ 0.08
VIM-201ENST00000224237 MCUBQ9NWR8 336 aa15.56■□□□□ 0.08
VIM-201ENST00000224237 ELOVL5Q9NYP7 299 aa15.56■□□□□ 0.08
VIM-201ENST00000224237 PCNX1Q96RV3 2341 aa15.56■□□□□ 0.08
VIM-201ENST00000224237 IGKV1-12A0A0C4DH73 117 aa15.55■□□□□ 0.08
VIM-201ENST00000224237 FOXI3A8MTJ6 420 aaPredicted RBP15.55■□□□□ 0.08
VIM-201ENST00000224237 ZNF732B4DXR9 585 aa15.55■□□□□ 0.08
VIM-201ENST00000224237 INMT-MINDY4F8WBC2 141 aa15.55■□□□□ 0.08
VIM-201ENST00000224237 LILRA1O75019 489 aa15.55■□□□□ 0.08
VIM-201ENST00000224237 CYB5AP00167 134 aa15.55■□□□□ 0.08
VIM-201ENST00000224237 IGKV1D-12P01611 117 aa15.55■□□□□ 0.08
VIM-201ENST00000224237 AKAIN1P0CW23 69 aa15.55■□□□□ 0.08
VIM-201ENST00000224237 HAAOP46952 286 aa15.55■□□□□ 0.08
VIM-201ENST00000224237 PPA1Q15181 289 aa15.55■□□□□ 0.08
VIM-201ENST00000224237 TATDN3Q17R31 274 aa15.55■□□□□ 0.08
VIM-201ENST00000224237 FJX1Q86VR8 437 aa15.55■□□□□ 0.08
VIM-201ENST00000224237 KDF1Q8NAX2 398 aaPredicted RBP15.55■□□□□ 0.08
VIM-201ENST00000224237 KLF14Q8TD94 323 aaPredicted RBP15.55■□□□□ 0.08
VIM-201ENST00000224237 ARHGAP5-AS1Q96IT6 56 aa15.55■□□□□ 0.08
VIM-201ENST00000224237 USB1Q9BQ65 265 aaKnown RBP15.55■□□□□ 0.08
VIM-201ENST00000224237 FGF23Q9GZV9 251 aaPredicted RBP15.55■□□□□ 0.08
VIM-201ENST00000224237 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.55■□□□□ 0.08
VIM-201ENST00000224237 NUDT15Q9NV35 164 aa15.55■□□□□ 0.08
VIM-201ENST00000224237 ZNF221Q9UK13 617 aa15.55■□□□□ 0.08
VIM-201ENST00000224237 SHANK1Q9Y566 2161 aa15.55■□□□□ 0.08
VIM-201ENST00000224237 IQCF6A8MYZ5 107 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 MFNGO00587 321 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 BLVRBP30043 206 aaPredicted RBP15.54■□□□□ 0.08
VIM-201ENST00000224237 RCVRNP35243 200 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 CASP6P55212 293 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 GNG2P59768 71 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 FAM27E3Q08E93 113 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 KCNJ8Q15842 424 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 TMEM255AQ5JRV8 349 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 TMEM211Q6ICI0 200 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 SLC25A26Q70HW3 274 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 TRAPPC6BQ86SZ2 158 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 SAXO1Q8IYX7 474 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 TMEM229BQ8NBD8 167 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 ST6GALNAC3Q8NDV1 305 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 DVL3Q92997 716 aaPredicted RBP15.54■□□□□ 0.08
VIM-201ENST00000224237 MARS2Q96GW9 593 aaKnown RBP15.54■□□□□ 0.08
VIM-201ENST00000224237 NOP16Q9Y3C1 178 aaKnown RBP15.54■□□□□ 0.08
VIM-201ENST00000224237 CA6P23280 308 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 BTG1P62324 171 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 GNG3P63215 75 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 NAAAQ02083 359 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 FAAP20Q6NZ36 180 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 OSR2Q8N2R0 312 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 RELL2Q8NC24 303 aaPredicted RBP15.54■□□□□ 0.08
VIM-201ENST00000224237 OR4C16Q8NGL9 310 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 NUDCD2Q8WVJ2 157 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 RND1Q92730 232 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 JKAMPQ9P055 326 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 KCNK7Q9Y2U2 307 aa15.54■□□□□ 0.08
VIM-201ENST00000224237 NBASA2RRP1 2371 aa15.53■□□□□ 0.08
VIM-201ENST00000224237 A0A0B4J293 547 aa15.53■□□□□ 0.08
VIM-201ENST00000224237 AKR7A2O43488 359 aa15.53■□□□□ 0.08
VIM-201ENST00000224237 CD3DP04234 171 aa15.53■□□□□ 0.08
VIM-201ENST00000224237 GABRR1P24046 479 aa15.53■□□□□ 0.08
VIM-201ENST00000224237 CALCRP30988 508 aa15.53■□□□□ 0.08
VIM-201ENST00000224237 PSG7Q13046 419 aa15.53■□□□□ 0.08
VIM-201ENST00000224237 SFRP4Q6FHJ7 346 aaPredicted RBP15.53■□□□□ 0.08
VIM-201ENST00000224237 STEAP1BQ6NZ63 245 aa15.53■□□□□ 0.08
VIM-201ENST00000224237 PCSK4Q6UW60 755 aa15.53■□□□□ 0.08
VIM-201ENST00000224237 BTN2A1Q7KYR7 527 aa15.53■□□□□ 0.08
VIM-201ENST00000224237 TMEM200AQ86VY9 491 aa15.53■□□□□ 0.08
VIM-201ENST00000224237 ZNF573Q86YE8 665 aa15.53■□□□□ 0.08
VIM-201ENST00000224237 LIX1LQ8IVB5 337 aa15.53■□□□□ 0.08
VIM-201ENST00000224237 DMRTA2Q96SC8 542 aa15.53■□□□□ 0.08
VIM-201ENST00000224237 TRAV6A0A075B6T7 132 aa15.52■□□□□ 0.08
VIM-201ENST00000224237 TRGV8A0A0C4DH27 118 aa15.52■□□□□ 0.08
VIM-201ENST00000224237 SERPINE3A8MV23 424 aa15.52■□□□□ 0.08
VIM-201ENST00000224237 M0R1B8 84 aa15.52■□□□□ 0.08
VIM-201ENST00000224237 SFTPBP07988 381 aa15.52■□□□□ 0.08
VIM-201ENST00000224237 ZNF83P51522 516 aa15.52■□□□□ 0.08
VIM-201ENST00000224237 RAG2P55895 527 aa15.52■□□□□ 0.08
VIM-201ENST00000224237 RTN4RL2Q86UN3 420 aa15.52■□□□□ 0.08
VIM-201ENST00000224237 MKXQ8IYA7 352 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms