RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 CLEC4MQ9H2X3 399 aaPredicted RBP17.13■□□□□ 0.33
PCDHB11-202ENST00000624887 IGKV1-27A0A075B6S5 117 aa17.12■□□□□ 0.33
PCDHB11-202ENST00000624887 MPC2O95563 127 aa17.12■□□□□ 0.33
PCDHB11-202ENST00000624887 NRASP01111 189 aa17.12■□□□□ 0.33
PCDHB11-202ENST00000624887 HLA-AP01891 365 aaKnown RBP17.12■□□□□ 0.33
PCDHB11-202ENST00000624887 EDN3P14138 238 aa17.12■□□□□ 0.33
PCDHB11-202ENST00000624887 C4BPBP20851 252 aa17.12■□□□□ 0.33
PCDHB11-202ENST00000624887 NFYAP23511 347 aaPredicted RBP17.12■□□□□ 0.33
PCDHB11-202ENST00000624887 ZBTB25P24278 435 aa17.12■□□□□ 0.33
PCDHB11-202ENST00000624887 PRSS12P56730 875 aa17.12■□□□□ 0.33
PCDHB11-202ENST00000624887 ARG2P78540 354 aa17.12■□□□□ 0.33
PCDHB11-202ENST00000624887 COLCA1Q6ZS62 124 aa17.12■□□□□ 0.33
PCDHB11-202ENST00000624887 LHFPL2Q6ZUX7 228 aa17.12■□□□□ 0.33
PCDHB11-202ENST00000624887 ARRDC1Q8N5I2 433 aa17.12■□□□□ 0.33
PCDHB11-202ENST00000624887 APH1AQ96BI3 265 aa17.12■□□□□ 0.33
PCDHB11-202ENST00000624887 METTL9Q9H1A3 318 aa17.12■□□□□ 0.33
PCDHB11-202ENST00000624887 LIPGQ9Y5X9 500 aa17.12■□□□□ 0.33
PCDHB11-202ENST00000624887 AUP1Q9Y679 476 aa17.12■□□□□ 0.33
PCDHB11-202ENST00000624887 LOC105371267A0A1B0GV96 52 aa17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 FAM230AA0A1W2PPH8 454 aa17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 HMSDA8MTL9 139 aa17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 CA11O75493 328 aa17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 IL2RAP01589 272 aa17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 CXCL2P19875 107 aa17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 RBP2P50120 134 aa17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 C3AR1Q16581 482 aa17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 ZNF766Q5HY98 468 aa17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 LY6G6FQ5SQ64 297 aa17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 C9orf135Q5VTT2 229 aa17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 LYG2Q86SG7 212 aa17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 HOGA1Q86XE5 327 aa17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 ELMOD3Q96FG2 381 aa17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 Q96M66 194 aa17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 DPCDQ9BVM2 203 aaPredicted RBP17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 EP300Q09472 2414 aaPredicted RBP17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 A0A096LPE4 126 aa17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 A0A1W2PPZ6 126 aa17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 NOS1APO75052 506 aaPredicted RBP17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 PPA1Q15181 289 aa17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 RTL6Q6ICC9 239 aa17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 TERB2Q8NHR7 220 aa17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 BORCS8Q96FH0 119 aa17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 ZNF552Q9H707 407 aaPredicted RBP17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 FN3KRPQ9HA64 309 aa17.11■□□□□ 0.33
PCDHB11-202ENST00000624887 MCRIP1C9JLW8 97 aa17.1■□□□□ 0.33
PCDHB11-202ENST00000624887 TM4SF5O14894 197 aa17.1■□□□□ 0.33
PCDHB11-202ENST00000624887 CD34P28906 385 aa17.1■□□□□ 0.33
PCDHB11-202ENST00000624887 FOXG1P55316 489 aaPredicted RBP17.1■□□□□ 0.33
PCDHB11-202ENST00000624887 SEC61A1P61619 476 aaKnown RBP17.1■□□□□ 0.33
PCDHB11-202ENST00000624887 PPP1R1AQ13522 171 aa17.1■□□□□ 0.33
PCDHB11-202ENST00000624887 ASCL4Q6XD76 172 aa17.1■□□□□ 0.33
PCDHB11-202ENST00000624887 MCEMP1Q8IX19 187 aa17.1■□□□□ 0.33
PCDHB11-202ENST00000624887 TMEM178AQ8NBL3 297 aa17.1■□□□□ 0.33
PCDHB11-202ENST00000624887 ZNF816-ZNF321PA0A0X1KG74 233 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 LINC00862A6NCI5 91 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 B8ZZF3 427 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 L7N2F9 121 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 M0R233 179 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 COX5BP10606 129 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 LIPCP11150 499 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 CEACAM1P13688 526 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 AMY2BP19961 511 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 OPCMLQ14982 345 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 RSU1Q15404 277 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 LPCAT3Q6P1A2 487 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 OR5M8Q8NGP6 311 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 OR5H2Q8NGV7 314 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 TECTBQ96PL2 329 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 DEFB127Q9H1M4 99 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 LDAHQ9H6V9 325 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 ASCL3Q9NQ33 180 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 NOP16Q9Y3C1 178 aaKnown RBP17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 C9orf170A2RU37 121 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 CEACAM18A8MTB9 384 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 EFSO43281 561 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 SPRY1O43609 319 aaPredicted RBP17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 ANGPTL7O43827 346 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 HLA-HP01893 362 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 CSTBP04080 98 aaKnown RBP17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 FUT6P51993 359 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 GMFBP60983 142 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 RNFT1Q5M7Z0 435 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 NUFIP2Q7Z417 695 aaKnown RBP17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 MARCH1Q8TCQ1 289 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 MITD1Q8WV92 249 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 WDYHV1Q96HA8 205 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 ST6GALNAC5Q9BVH7 336 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 ZDHHC11Q9H8X9 412 aa17.09■□□□□ 0.33
PCDHB11-202ENST00000624887 TRGV5A0A0B4J1U4 118 aa17.08■□□□□ 0.33
PCDHB11-202ENST00000624887 LEUTXA8MZ59 168 aa17.08■□□□□ 0.33
PCDHB11-202ENST00000624887 PROB1E7EW31 1015 aa17.08■□□□□ 0.33
PCDHB11-202ENST00000624887 HTR3BO95264 441 aa17.08■□□□□ 0.33
PCDHB11-202ENST00000624887 IFNA7P01567 189 aa17.08■□□□□ 0.33
PCDHB11-202ENST00000624887 GABRR1P24046 479 aa17.08■□□□□ 0.33
PCDHB11-202ENST00000624887 SNU13P55769 128 aaKnown RBP17.08■□□□□ 0.33
PCDHB11-202ENST00000624887 TAS2R46P59540 309 aa17.08■□□□□ 0.33
PCDHB11-202ENST00000624887 IL13RA1P78552 427 aa17.08■□□□□ 0.33
PCDHB11-202ENST00000624887 SRSF4Q08170 494 aaKnown RBP17.08■□□□□ 0.33
PCDHB11-202ENST00000624887 VASH2Q86V25 355 aa17.08■□□□□ 0.33
PCDHB11-202ENST00000624887 SPERTQ8NA61 448 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms