RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 SMIM10L2AP0DMW4 78 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 SMIM10L2BP0DMW5 78 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 CD37P11049 281 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 RPS4Y1P22090 263 aaKnown RBP5.36□□□□□ -1.55
SMAD4-203ENST00000585448 GABRA2P47869 451 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 PTH2RP49190 550 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 RAB9AP51151 201 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 P2RX1P51575 399 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 ATP1B3P54709 279 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 CKS1BP61024 79 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 UBE2NP61088 152 aaKnown RBP5.36□□□□□ -1.55
SMAD4-203ENST00000585448 RPS14P62263 151 aaKnown RBP5.36□□□□□ -1.55
SMAD4-203ENST00000585448 SNRPD1P62314 119 aaKnown RBP5.36□□□□□ -1.55
SMAD4-203ENST00000585448 RPL38P63173 70 aaKnown RBP5.36□□□□□ -1.55
SMAD4-203ENST00000585448 PAFAH1B2P68402 229 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 CACNG1Q06432 222 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 PMPCAQ10713 525 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 PMS2P11Q13670 270 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 RGNQ15493 299 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 TMEM249Q2WGJ8 235 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 MPPE1Q53F39 396 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 ZNF667Q5HYK9 610 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 AADACL3Q5VUY0 350 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 REEP3Q6NUK4 255 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 OPN5Q6U736 354 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 ZNF322Q6U7Q0 402 aaPredicted RBP5.36□□□□□ -1.55
SMAD4-203ENST00000585448 FRRS1Q6ZNA5 592 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 PRSS45Q7RTY3 260 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 CEACAM19Q7Z692 300 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 TSEN54Q7Z6J9 526 aaKnown RBP5.36□□□□□ -1.55
SMAD4-203ENST00000585448 C17orf64Q86WR6 236 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 ZNF280BQ86YH2 543 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 RNF175Q8N4F7 328 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 STPG4Q8N801 248 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 OR10H4Q8NGA5 316 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 OR9K2Q8NGE7 335 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 OR6K2Q8NGY2 324 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 OR4X1Q8NH49 305 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 MFSD8Q8NHS3 518 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 GPR119Q8TDV5 335 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 TMEM170AQ8WVE7 144 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 SPRYD4Q8WW59 207 aaPredicted RBP5.36□□□□□ -1.55
SMAD4-203ENST00000585448 SOCS4Q8WXH5 440 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 CACNG8Q8WXS5 425 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 FAM3CQ92520 227 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 FGF11Q92914 225 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 RAB1CQ92928 201 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 MIB2Q96AX9 1013 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 MOAP1Q96BY2 351 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 KTI12Q96EK9 354 aaPredicted RBP5.36□□□□□ -1.55
SMAD4-203ENST00000585448 C12orf42Q96LP6 360 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 HIST1H2AAQ96QV6 131 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 SIGMAR1Q99720 223 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 SEMA3CQ99985 751 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 FNDC11Q9BVV2 318 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 SCRT1Q9BWW7 348 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 OR11A1Q9GZK7 315 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 SLC5A7Q9GZV3 580 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 POLR2J3Q9H1A7 115 aaKnown RBP5.36□□□□□ -1.55
SMAD4-203ENST00000585448 FZD8Q9H461 694 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 MOB1AQ9H8S9 216 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 LRTM1Q9HBL6 345 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 TAF9BQ9HBM6 251 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 SGK2Q9HBY8 427 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 TMEM38BQ9NVV0 291 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 PLEKHJ1Q9NW61 149 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 HIF1ANQ9NWT6 349 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 TVP23BQ9NYZ1 205 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 OR6C3Q9NZP0 311 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 MTFP1Q9UDX5 166 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 ZNF107Q9UII5 783 aaPredicted RBP5.36□□□□□ -1.55
SMAD4-203ENST00000585448 RHBDD3Q9Y3P4 386 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 WIPI2Q9Y4P8 454 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 ARL5AQ9Y689 179 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 SNED1Q8TER0 1413 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 IGLV3-22A0A075B6J6 115 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 IGHV1-69-2A0A0G2JMI3 117 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 A0A1W2PRS3 328 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 H3BQ15 152 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 SOCS6O14544 535 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 GAPDHSO14556 408 aaPredicted RBP5.35□□□□□ -1.55
SMAD4-203ENST00000585448 GEMIN2O14893 280 aaKnown RBP5.35□□□□□ -1.55
SMAD4-203ENST00000585448 HCRTR1O43613 425 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 FGF17O60258 216 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 FCMRO60667 390 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 LRP3O75074 770 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 NME6O75414 186 aaPredicted RBP5.35□□□□□ -1.55
SMAD4-203ENST00000585448 TSPAN13O95857 204 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 IFNW1P05000 195 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 HNRNPA1P09651 372 aaKnown RBP eCLIP5.35□□□□□ -1.55
SMAD4-203ENST00000585448 OR8U9P0C7N5 309 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 SEC11BP0C7V7 166 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 ESDP10768 282 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 DRD1P21728 446 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 AK4P27144 223 aaPredicted RBP5.35□□□□□ -1.55
SMAD4-203ENST00000585448 S100GP29377 79 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 GCH1P30793 250 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 PTGER4P35408 488 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 CEACAM3P40198 252 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 HNRNPA3P51991 378 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms