RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 PARP11Q9NR21 331 aa15.32■□□□□ 0.04
SCARF1-205ENST00000571272 EDARQ9UNE0 448 aa15.32■□□□□ 0.04
SCARF1-205ENST00000571272 FAM157AC9JC47 383 aa15.32■□□□□ 0.04
SCARF1-205ENST00000571272 GLI4P10075 376 aa15.32■□□□□ 0.04
SCARF1-205ENST00000571272 ECH1Q13011 328 aa15.32■□□□□ 0.04
SCARF1-205ENST00000571272 SMCO1Q147U7 214 aa15.32■□□□□ 0.04
SCARF1-205ENST00000571272 SP6Q3SY56 376 aa15.32■□□□□ 0.04
SCARF1-205ENST00000571272 TMEM176BQ3YBM2 270 aaPredicted RBP15.32■□□□□ 0.04
SCARF1-205ENST00000571272 GGNBP1Q5YKI7 109 aa15.32■□□□□ 0.04
SCARF1-205ENST00000571272 NANPQ8TBE9 248 aa15.32■□□□□ 0.04
SCARF1-205ENST00000571272 SHDQ96IW2 340 aa15.32■□□□□ 0.04
SCARF1-205ENST00000571272 PRRX2Q99811 253 aa15.32■□□□□ 0.04
SCARF1-205ENST00000571272 NAA11Q9BSU3 229 aaPredicted RBP15.32■□□□□ 0.04
SCARF1-205ENST00000571272 C20orf24Q9BUV8 137 aa15.32■□□□□ 0.04
SCARF1-205ENST00000571272 PISDQ9UG56 409 aa15.32■□□□□ 0.04
SCARF1-205ENST00000571272 CACFD1Q9UGQ2 172 aa15.32■□□□□ 0.04
SCARF1-205ENST00000571272 FOXI3A8MTJ6 420 aaPredicted RBP15.31■□□□□ 0.04
SCARF1-205ENST00000571272 NME2P1O60361 137 aa15.31■□□□□ 0.04
SCARF1-205ENST00000571272 IFNA4P05014 189 aa15.31■□□□□ 0.04
SCARF1-205ENST00000571272 SNRNP70P08621 437 aaKnown RBP15.31■□□□□ 0.04
SCARF1-205ENST00000571272 RBMS3Q6XE24 437 aaKnown RBP15.31■□□□□ 0.04
SCARF1-205ENST00000571272 SLC16A13Q7RTY0 426 aa15.31■□□□□ 0.04
SCARF1-205ENST00000571272 SGPP2Q8IWX5 399 aa15.31■□□□□ 0.04
SCARF1-205ENST00000571272 ISOC2Q96AB3 205 aa15.31■□□□□ 0.04
SCARF1-205ENST00000571272 ZNF160Q9HCG1 818 aa15.31■□□□□ 0.04
SCARF1-205ENST00000571272 PLEKHJ1Q9NW61 149 aa15.31■□□□□ 0.04
SCARF1-205ENST00000571272 AMDHD2Q9Y303 409 aa15.31■□□□□ 0.04
SCARF1-205ENST00000571272 DEDDO75618 318 aa15.31■□□□□ 0.04
SCARF1-205ENST00000571272 JTBO76095 146 aa15.31■□□□□ 0.04
SCARF1-205ENST00000571272 DAOP14920 347 aa15.31■□□□□ 0.04
SCARF1-205ENST00000571272 ZNF616Q08AN1 781 aa15.31■□□□□ 0.04
SCARF1-205ENST00000571272 LRRC18Q8N456 261 aa15.31■□□□□ 0.04
SCARF1-205ENST00000571272 OR9K2Q8NGE7 335 aa15.31■□□□□ 0.04
SCARF1-205ENST00000571272 OR6X1Q8NH79 312 aa15.31■□□□□ 0.04
SCARF1-205ENST00000571272 EXPH5Q8NEV8 1989 aa15.31■□□□□ 0.04
SCARF1-205ENST00000571272 PRF1P14222 555 aa15.3■□□□□ 0.04
SCARF1-205ENST00000571272 RRADP55042 308 aa15.3■□□□□ 0.04
SCARF1-205ENST00000571272 CLDN17P56750 224 aa15.3■□□□□ 0.04
SCARF1-205ENST00000571272 TOMM40LQ969M1 308 aa15.3■□□□□ 0.04
SCARF1-205ENST00000571272 SDK2Q58EX2 2172 aa15.3■□□□□ 0.04
SCARF1-205ENST00000571272 MED19A0JLT2 244 aaPredicted RBP15.3■□□□□ 0.04
SCARF1-205ENST00000571272 OR5H15A6NDH6 313 aa15.3■□□□□ 0.04
SCARF1-205ENST00000571272 OR2J2O76002 312 aa15.3■□□□□ 0.04
SCARF1-205ENST00000571272 TSPAN15O95858 294 aa15.3■□□□□ 0.04
SCARF1-205ENST00000571272 NAT2P11245 290 aa15.3■□□□□ 0.04
SCARF1-205ENST00000571272 FHITP49789 147 aa15.3■□□□□ 0.04
SCARF1-205ENST00000571272 MIDNQ504T8 468 aa15.3■□□□□ 0.04
SCARF1-205ENST00000571272 HIST1H2BAQ96A08 127 aa15.3■□□□□ 0.04
SCARF1-205ENST00000571272 IP6K3Q96PC2 410 aa15.3■□□□□ 0.04
SCARF1-205ENST00000571272 SERPINE3A8MV23 424 aa15.3■□□□□ 0.04
SCARF1-205ENST00000571272 IFNA21P01568 189 aa15.3■□□□□ 0.04
SCARF1-205ENST00000571272 PTAFRP25105 342 aa15.3■□□□□ 0.04
SCARF1-205ENST00000571272 CHAF1BQ13112 559 aa15.3■□□□□ 0.04
SCARF1-205ENST00000571272 ZNF581Q9P0T4 197 aa15.3■□□□□ 0.04
SCARF1-205ENST00000571272 PIGLQ9Y2B2 252 aa15.3■□□□□ 0.04
SCARF1-205ENST00000571272 C1orf196B1AJZ1 125 aa15.29■□□□□ 0.04
SCARF1-205ENST00000571272 S100A6P06703 90 aa15.29■□□□□ 0.04
SCARF1-205ENST00000571272 OPRM1P35372 400 aa15.29■□□□□ 0.04
SCARF1-205ENST00000571272 PTGDSP41222 190 aa15.29■□□□□ 0.04
SCARF1-205ENST00000571272 PRSS12P56730 875 aa15.29■□□□□ 0.04
SCARF1-205ENST00000571272 GRB2P62993 217 aaKnown RBP15.29■□□□□ 0.04
SCARF1-205ENST00000571272 HGFACQ04756 655 aa15.29■□□□□ 0.04
SCARF1-205ENST00000571272 SURF2Q15527 256 aaPredicted RBP15.29■□□□□ 0.04
SCARF1-205ENST00000571272 SYT13Q7L8C5 426 aa15.29■□□□□ 0.04
SCARF1-205ENST00000571272 OXGR1Q96P68 337 aa15.29■□□□□ 0.04
SCARF1-205ENST00000571272 LIME1Q9H400 295 aa15.29■□□□□ 0.04
SCARF1-205ENST00000571272 XRCC2O43543 280 aa15.29■□□□□ 0.04
SCARF1-205ENST00000571272 PIAS2O75928 621 aa15.29■□□□□ 0.04
SCARF1-205ENST00000571272 C1QL1O75973 258 aa15.29■□□□□ 0.04
SCARF1-205ENST00000571272 TIAF1O95411 115 aa15.29■□□□□ 0.04
SCARF1-205ENST00000571272 DIRAS3O95661 229 aa15.29■□□□□ 0.04
SCARF1-205ENST00000571272 DBHP09172 617 aa15.29■□□□□ 0.04
SCARF1-205ENST00000571272 ZNF806P0C7X5 589 aa15.29■□□□□ 0.04
SCARF1-205ENST00000571272 TMEM225BP0DP42 221 aa15.29■□□□□ 0.04
SCARF1-205ENST00000571272 ZNF44P15621 663 aa15.29■□□□□ 0.04
SCARF1-205ENST00000571272 TSPO2Q5TGU0 170 aa15.29■□□□□ 0.04
SCARF1-205ENST00000571272 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.29■□□□□ 0.04
SCARF1-205ENST00000571272 PADI1Q9ULC6 663 aa15.29■□□□□ 0.04
SCARF1-205ENST00000571272 TIMM10BQ9Y5J6 103 aa15.29■□□□□ 0.04
SCARF1-205ENST00000571272 A0A1B0GV50 99 aa15.28■□□□□ 0.04
SCARF1-205ENST00000571272 A0A1W2PPE3 182 aa15.28■□□□□ 0.04
SCARF1-205ENST00000571272 M0R036 132 aa15.28■□□□□ 0.04
SCARF1-205ENST00000571272 ANGPTL7O43827 346 aa15.28■□□□□ 0.04
SCARF1-205ENST00000571272 AWAT1Q58HT5 328 aa15.28■□□□□ 0.04
SCARF1-205ENST00000571272 KRBOX4Q5JUW0 171 aa15.28■□□□□ 0.04
SCARF1-205ENST00000571272 PRAMEF20Q5VT98 475 aa15.28■□□□□ 0.04
SCARF1-205ENST00000571272 C15orf54Q8N8G6 183 aa15.28■□□□□ 0.04
SCARF1-205ENST00000571272 NAXEQ8NCW5 288 aa15.28■□□□□ 0.04
SCARF1-205ENST00000571272 FAAP24Q9BTP7 215 aa15.28■□□□□ 0.04
SCARF1-205ENST00000571272 RNF122Q9H9V4 155 aa15.28■□□□□ 0.04
SCARF1-205ENST00000571272 SHANK1Q9Y566 2161 aa15.28■□□□□ 0.04
SCARF1-205ENST00000571272 ETV2O00321 342 aaPredicted RBP15.28■□□□□ 0.04
SCARF1-205ENST00000571272 THBS4P35443 961 aa15.28■□□□□ 0.04
SCARF1-205ENST00000571272 GUCA1AP43080 201 aaPredicted RBP15.28■□□□□ 0.04
SCARF1-205ENST00000571272 PIGPP57054 158 aa15.28■□□□□ 0.04
SCARF1-205ENST00000571272 EIF2S3LQ2VIR3 472 aaKnown RBP15.28■□□□□ 0.04
SCARF1-205ENST00000571272 EIF5A2Q9GZV4 153 aaKnown RBP15.28■□□□□ 0.04
SCARF1-205ENST00000571272 GHRLQ9UBU3 117 aa15.28■□□□□ 0.04
SCARF1-205ENST00000571272 KPTNQ9Y664 436 aa15.28■□□□□ 0.04
SCARF1-205ENST00000571272 A6NLC8 198 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms