RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 CDNFQ49AH0 187 aa8.15□□□□□ -1.1
HNRNPC-223ENST00000556142 PLAC9Q5JTB6 97 aa8.15□□□□□ -1.1
HNRNPC-223ENST00000556142 ZNF474Q6S9Z5 364 aaPredicted RBP8.15□□□□□ -1.1
HNRNPC-223ENST00000556142 RFPL4BQ6ZWI9 263 aa8.15□□□□□ -1.1
HNRNPC-223ENST00000556142 BTN2A1Q7KYR7 527 aa8.15□□□□□ -1.1
HNRNPC-223ENST00000556142 CXorf67Q86X51 503 aaPredicted RBP8.15□□□□□ -1.1
HNRNPC-223ENST00000556142 PNLDC1Q8NA58 520 aaKnown RBP8.15□□□□□ -1.1
HNRNPC-223ENST00000556142 TMEM229BQ8NBD8 167 aa8.15□□□□□ -1.1
HNRNPC-223ENST00000556142 OR56B2PQ8NGI1 322 aa8.15□□□□□ -1.1
HNRNPC-223ENST00000556142 OR5D18Q8NGL1 313 aa8.15□□□□□ -1.1
HNRNPC-223ENST00000556142 TNFAIP8L1Q8WVP5 186 aa8.15□□□□□ -1.1
HNRNPC-223ENST00000556142 PIGCQ92535 297 aa8.15□□□□□ -1.1
HNRNPC-223ENST00000556142 PHF21AQ96BD5 680 aa8.15□□□□□ -1.1
HNRNPC-223ENST00000556142 TECTBQ96PL2 329 aa8.15□□□□□ -1.1
HNRNPC-223ENST00000556142 BANF2Q9H503 90 aa8.15□□□□□ -1.1
HNRNPC-223ENST00000556142 OPA3Q9H6K4 179 aa8.15□□□□□ -1.1
HNRNPC-223ENST00000556142 TAS2R8Q9NYW2 309 aa8.15□□□□□ -1.1
HNRNPC-223ENST00000556142 ZNF107Q9UII5 783 aaPredicted RBP8.15□□□□□ -1.1
HNRNPC-223ENST00000556142 ANAPC10Q9UM13 185 aa8.15□□□□□ -1.1
HNRNPC-223ENST00000556142 DNAJC13O75165 2243 aa8.15□□□□□ -1.1
HNRNPC-223ENST00000556142 MED12LQ86YW9 2145 aa8.15□□□□□ -1.11
HNRNPC-223ENST00000556142 IGKV1-12A0A0C4DH73 117 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 FAM230AA0A1W2PPH8 454 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 HMX3A6NHT5 357 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 FIGNL2A6NMB9 653 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 ZNF850A8MQ14 1090 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 BOLA2-SMG1P6H3BVE0 249 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 SSX5O60225 188 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 SMPD2O60906 423 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 IGKV1D-12P01611 117 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 IGLV1-44P01699 117 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 TRAPPC2P0DI81 140 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 TRAPPC2BP0DI82 140 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 GNB3P16520 340 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 RBP2P50120 134 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 RAG2P55895 527 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 MTCP1P56278 107 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 MALLQ13021 153 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 P2RY6Q15077 328 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 TATDN3Q17R31 274 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 TBC1D28Q2M2D7 210 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 PCGF3Q3KNV8 242 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 RSBN1Q5VWQ0 802 aaPredicted RBP8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 Q6ZTK2 550 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 BEND4Q6ZU67 534 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 DOLPP1Q86YN1 238 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 C17orf78Q8N4C9 275 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 Q8NFD4 153 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 PXT1Q8NFP0 134 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 OR10K1Q8NGX5 313 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 HPSE2Q8WWQ2 592 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 TMEM59Q9BXS4 323 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 CACNG6Q9BXT2 260 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 SELENOIQ9C0D9 397 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 ZMAT3Q9HA38 289 aaKnown RBP8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.14□□□□□ -1.118e-8■■■□□ 16.6
HNRNPC-223ENST00000556142 IL36GQ9NZH8 169 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 COPZ2Q9P299 210 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 GPR160Q9UJ42 338 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 TUBD1Q9UJT1 453 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 ALG5Q9Y673 324 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 NBPF19A0A087WUL8 3843 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 NOTCH2Q04721 2471 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 SPTAN1Q13813 2472 aaKnown RBP8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 PQLC2LA1A4F0 135 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 C7orf66A4D0T2 115 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 MEIS3P1A6NDR6 274 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 TMEM235A6NFC5 223 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 CD300LBA8K4G0 201 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 MFNGO00587 321 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 LILRA1O75019 489 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 CRTAPO75718 401 aaPredicted RBP8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 CD74P04233 296 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 HNRNPCP07910 306 aaKnown RBP eCLIP8.14□□□□□ -1.113e-7■■□□□ 12.3
HNRNPC-223ENST00000556142 CSF1P09603 554 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 ZNF735P0CB33 412 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 ZNF35P13682 527 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 MGMTP16455 207 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 IDH3GP51553 393 aaPredicted RBP8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 MECP2P51608 486 aaKnown RBP8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 ATP1B3P54709 279 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 PER3P56645 1201 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 PDZK1IP1Q13113 114 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 PRDX4Q13162 271 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 SLC22A6Q4U2R8 563 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 PLCXD3Q63HM9 321 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 SFRP4Q6FHJ7 346 aaPredicted RBP8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 FAAP20Q6NZ36 180 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 FBXW12Q6X9E4 464 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 BHLHA15Q7RTS1 189 aaPredicted RBP8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 MRPL21Q7Z2W9 205 aaKnown RBP8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 FJX1Q86VR8 437 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 FAM169BQ8N8A8 192 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 CSNK2A3Q8NEV1 391 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 OR4D10Q8NGI6 311 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 OR5L1Q8NGL2 311 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 OR4C16Q8NGL9 310 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 HPS1Q92902 700 aa8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 SNRNP40Q96DI7 357 aaKnown RBP8.14□□□□□ -1.11
HNRNPC-223ENST00000556142 BORCS8Q96FH0 119 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms