RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 MARVELD1Q9BSK0 173 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 HIF1ANQ9NWT6 349 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 HCSTQ9UBK5 93 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 GDF2Q9UK05 429 aaPredicted RBP6.99□□□□□ -1.29
VPS13D-211ENST00000543710 TIMM9Q9Y5J7 89 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 RALGAPA2Q2PPJ7 1873 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 OR6C68A6NDL8 312 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 C16orf97H3BN30 126 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 ZIC2O95409 532 aaPredicted RBP6.99□□□□□ -1.29
VPS13D-211ENST00000543710 HRASP01112 189 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 NGFRP08138 427 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 CST2P09228 141 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 BRS3P32247 399 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 RPL13AP40429 203 aaKnown RBP6.99□□□□□ -1.29
VPS13D-211ENST00000543710 RFC3P40938 356 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 SLC35B1P78383 322 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 ZNF718Q3SXZ3 478 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 PRAMEF20Q5VT98 475 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 BMPERQ8N8U9 685 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 ZNF680Q8NEM1 530 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 OR1L6Q8NGR2 347 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 OR8U1Q8NH10 309 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 OR1F12Q8NHA8 337 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 C12orf49Q9H741 205 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 MPC1Q9Y5U8 109 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 STRCP1A6NGW2 1772 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 M0R082 166 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 FBXO24O75426 580 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 DCTDP32321 178 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 LSM6P62312 80 aaKnown RBP6.99□□□□□ -1.29
VPS13D-211ENST00000543710 NKAIN4Q8IVV8 208 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 TP53I13Q8NBR0 393 aaPredicted RBP6.99□□□□□ -1.29
VPS13D-211ENST00000543710 OR2G2Q8NGZ5 317 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 NUDCD2Q8WVJ2 157 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 NOL4LQ96MY1 436 aaPredicted RBP6.99□□□□□ -1.29
VPS13D-211ENST00000543710 TMEM147Q9BVK8 224 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 GAL3ST2Q9H3Q3 398 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 NAA60Q9H7X0 242 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 CES1P1Q9UKY3 287 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 FAM90A10PA6NDY2 464 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 FAM90A18PA6NE21 464 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 FAM90A16PA6NEW6 464 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 FAM90A20PA6NIJ5 464 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 FAM90A8PA6NJQ4 464 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 FAM90A7PA6NKC0 464 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 AQP7P3A6NL99 342 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 FAM90A22PA8MWA6 464 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 FAM90A12PA8MX19 464 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 FAM90A5PA8MXJ8 464 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 FAM90A23PA8MXZ1 464 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 G3V3Q6 166 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 COX7A2P2O60397 106 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 ICOSLGO75144 302 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 SBK3P0C264 359 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 FAM90A15PP0C7V4 464 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 FAM90A13PP0C7W8 464 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 FAM90A14PP0C7W9 464 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 FAM90A24PP0C7X0 464 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 GPR6P46095 362 aaPredicted RBP6.99□□□□□ -1.29
VPS13D-211ENST00000543710 UBE2IP63279 158 aaKnown RBP6.99□□□□□ -1.29
VPS13D-211ENST00000543710 GPNMBQ14956 572 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 MIDNQ504T8 468 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 ZNF343Q6P1L6 599 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 RTN4RL1Q86UN2 441 aaPredicted RBP6.99□□□□□ -1.29
VPS13D-211ENST00000543710 PRR18Q8N4B5 295 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 LILRB1Q8NHL6 650 aaPredicted RBP6.99□□□□□ -1.29
VPS13D-211ENST00000543710 MARVELD3Q96A59 401 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 AUNIPQ9H7T9 357 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 MMP7P09237 267 aaPredicted RBP6.98□□□□□ -1.29
VPS13D-211ENST00000543710 FBXO45P0C2W1 286 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 CLEC2LP0C7M8 214 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 HIST1H1DP16402 221 aaKnown RBP6.98□□□□□ -1.29
VPS13D-211ENST00000543710 PTNP21246 168 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 EMDP50402 254 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 GSG1Q2KHT4 349 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 HMGN2P46Q86SG4 172 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 BSCL2Q96G97 398 aaPredicted RBP6.98□□□□□ -1.29
VPS13D-211ENST00000543710 SLC52A3Q9NQ40 469 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 PARP11Q9NR21 331 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 GAB2Q9UQC2 676 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 CHST2Q9Y4C5 530 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 TMEM235A6NFC5 223 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 UPK1AO00322 258 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 PPP6CO00743 305 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 EFSO43281 561 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 FUT3P21217 361 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 ZP4Q12836 540 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 TOR2AQ5JU69 321 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 MEX3DQ86XN8 651 aaKnown RBP6.98□□□□□ -1.29
VPS13D-211ENST00000543710 ZNF439Q8NDP4 499 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 OR5M9Q8NGP3 310 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 OR4F5Q8NH21 305 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 OR51E1Q8TCB6 317 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 ASB10Q8WXI3 467 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 OR4F4Q96R69 305 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 ALX4Q9H161 411 aaPredicted RBP6.98□□□□□ -1.29
VPS13D-211ENST00000543710 CXXC4Q9H2H0 198 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 GPR173Q9NS66 373 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 CDC42EP3Q9UKI2 254 aa6.98□□□□□ -1.29
VPS13D-211ENST00000543710 TEX50A0A1B0GTY4 177 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms