RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 ZCCHC14Q8WYQ9 949 aaKnown RBP8.95□□□□□ -0.98
COL4A6-208ENST00000538570 SLIRPQ9GZT3 109 aaKnown RBP8.95□□□□□ -0.98
COL4A6-208ENST00000538570 GON4LQ3T8J9 2241 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 TIAM2Q8IVF5 1701 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 UPK1AO00322 258 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 SEMG1P04279 462 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 IL5P05113 134 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 POU2F2P09086 479 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 PCBP3P57721 371 aaKnown RBP8.95□□□□□ -0.98
COL4A6-208ENST00000538570 SLC25A35Q3KQZ1 300 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 LINC00303Q3SY05 128 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 CBLN2Q8IUK8 224 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 C8orf44Q96CB5 159 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 HES7Q9BYE0 225 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 AAMDCQ9H7C9 122 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 FKBP11Q9NYL4 201 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 KLK11Q9UBX7 282 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 MYO18AQ92614 2054 aaKnown RBP8.95□□□□□ -0.98
COL4A6-208ENST00000538570 KLK8O60259 260 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 RHBDL1O75783 438 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 CD99P14209 185 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 ABCD3P28288 659 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 DHRS7BQ6IAN0 325 aaPredicted RBP8.95□□□□□ -0.98
COL4A6-208ENST00000538570 PARM1Q6UWI2 310 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 NOXO1Q8NFA2 376 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 LSM2Q9Y333 95 aaKnown RBP8.95□□□□□ -0.98
COL4A6-208ENST00000538570 TRGV10A0A0A0MS01 117 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 OR2M5A3KFT3 312 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 SPRY1O43609 319 aaPredicted RBP8.94□□□□□ -0.98
COL4A6-208ENST00000538570 HIST3H3Q16695 136 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 REC114Q7Z4M0 266 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 TMEM179BQ7Z7N9 219 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 OR5A2Q8NGI9 324 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 OR4A4PQ8NGN8 299 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 DUS4LO95620 317 aaKnown RBP8.94□□□□□ -0.98
COL4A6-208ENST00000538570 ST6GAL1P15907 406 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 PAX5Q02548 391 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 HSD17B13Q7Z5P4 300 aaPredicted RBP8.94□□□□□ -0.98
COL4A6-208ENST00000538570 ROBO4Q8WZ75 1007 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 BCL2L2Q92843 193 aaPredicted RBP8.94□□□□□ -0.98
COL4A6-208ENST00000538570 MVB12AQ96EY5 273 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 UBE2ZQ9H832 354 aaPredicted RBP8.94□□□□□ -0.98
COL4A6-208ENST00000538570 B9D1Q9UPM9 204 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 HDGFL3Q9Y3E1 203 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 MYH9P35579 1960 aaKnown RBP8.94□□□□□ -0.98
COL4A6-208ENST00000538570 TSPAN12O95859 305 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 BVESQ8NE79 360 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 CLDN23Q96B33 292 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 FBXO17Q96EF6 278 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 HES4Q9HCC6 221 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 MSL2Q9HCI7 577 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 DMRT1Q9Y5R6 373 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 UBR2Q8IWV8 1755 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 LOC105371267A0A1B0GV96 52 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 CLDN34H7C241 214 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 PYCARD-AS1I3L0S3 204 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 B4GALT1P15291 398 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 SPCS3P61009 180 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 FAM3AP98173 230 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 ST3GAL2Q16842 350 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 FAHD2BQ6P2I3 314 aaPredicted RBP8.94□□□□□ -0.98
COL4A6-208ENST00000538570 TMPRSS11FQ6ZWK6 438 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 DND1Q8IYX4 353 aaKnown RBP8.94□□□□□ -0.98
COL4A6-208ENST00000538570 FAHD2AQ96GK7 314 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 DERL3Q96Q80 235 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 FAAP24Q9BTP7 215 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 MS4A7Q9GZW8 240 aaPredicted RBP8.94□□□□□ -0.98
COL4A6-208ENST00000538570 ZNF576Q9H609 170 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 ALS2Q96Q42 1657 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 DHHO43323 396 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 FPR2P25090 351 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 GUCA2AQ02747 115 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 AGERQ15109 404 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 RGS7BPQ6MZT1 257 aaPredicted RBP8.94□□□□□ -0.98
COL4A6-208ENST00000538570 KMT5CQ86Y97 462 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 ARRDC1Q8N5I2 433 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 ASB16Q96NS5 453 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 PLEKHB1Q9UF11 243 aaPredicted RBP8.94□□□□□ -0.98
COL4A6-208ENST00000538570 MMP17Q9ULZ9 603 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 PAM16Q9Y3D7 125 aa8.94□□□□□ -0.98
COL4A6-208ENST00000538570 TCRBV16S1A1N1A0A5B0 115 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 TMEM30CPA0ZSE6 113 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 FIGNL2A6NMB9 653 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 H3BP45 60 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 SCGB1A1P11684 91 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 GPM6AP51674 278 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 PATE1Q8WXA2 126 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 MYO9BQ13459 2157 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 SLC17A2O00624 439 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 CST7O76096 145 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 HMGA1P17096 107 aaKnown RBP8.93□□□□□ -0.98
COL4A6-208ENST00000538570 PSMB2P49721 201 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 SUMO3P55854 103 aaPredicted RBP8.93□□□□□ -0.98
COL4A6-208ENST00000538570 PRDX4Q13162 271 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 VMA21Q3ZAQ7 101 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 RNASEKQ6P5S7 137 aaKnown RBP8.93□□□□□ -0.98
COL4A6-208ENST00000538570 MAMSTRQ6ZN01 415 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 PTOV1Q86YD1 416 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 ST6GAL2Q96JF0 529 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 DMRTA2Q96SC8 542 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms