RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 DHRS9Q9BPW9 319 aa12.96□□□□□ -0.33
NUP54-217ENST00000514987 ARRDC1-AS1Q9H2J1 176 aa12.96□□□□□ -0.33
NUP54-217ENST00000514987 GPR173Q9NS66 373 aa12.96□□□□□ -0.33
NUP54-217ENST00000514987 DEPPQ9NTK1 212 aa12.96□□□□□ -0.33
NUP54-217ENST00000514987 PARPBPQ9NWS1 579 aa12.96□□□□□ -0.33
NUP54-217ENST00000514987 CDK2AP1O14519 115 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 XRCC2O43543 280 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 SPDEFO95238 335 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 SERPINA5P05154 406 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 CRHP06850 196 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 B4GALT1P15291 398 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 ZP3P21754 424 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 AVPR2P30518 371 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 RBP2P50120 134 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 NPY4RP50391 375 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 ATP1B3P54709 279 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 ARPC4P59998 168 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 PSG4Q00888 419 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 LPAL2Q16609 132 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 OVCH2Q7RTZ1 564 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 HSD17B13Q7Z5P4 300 aaPredicted RBP12.95□□□□□ -0.34
NUP54-217ENST00000514987 RTN4RL2Q86UN3 420 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 TMEM105Q8N8V8 129 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 OR13G1Q8NGZ3 307 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 ZNF775Q96BV0 537 aaPredicted RBP12.95□□□□□ -0.34
NUP54-217ENST00000514987 WBP1Q96G27 269 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 IP6K3Q96PC2 410 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 REG4Q9BYZ8 158 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 SMOC1Q9H4F8 434 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 C5orf66Q9H5L9 145 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 CHMP1AQ9HD42 196 aaPredicted RBP12.95□□□□□ -0.34
NUP54-217ENST00000514987 PLEKHJ1Q9NW61 149 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 EHFQ9NZC4 300 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 IL36GQ9NZH8 169 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 SLC7A11Q9UPY5 501 aa12.95□□□□□ -0.34
NUP54-217ENST00000514987 C14orf166Q9Y224 244 aaKnown RBP12.95□□□□□ -0.34
NUP54-217ENST00000514987 TRBV6-7A0A0A0MS04 114 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 NRASP01111 189 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 SP9P0CG40 484 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 NTF4P34130 210 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 SERPINF1P36955 418 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 STARP49675 285 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 CLDN15P56746 228 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 CDCP2Q5VXM1 449 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 SIGIRRQ6IA17 410 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 OR2M7Q8NG81 312 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 OR10K1Q8NGX5 313 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 BORCS8Q96FH0 119 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 ALKBH3Q96Q83 286 aaPredicted RBP12.94□□□□□ -0.34
NUP54-217ENST00000514987 DNTTIP1Q9H147 329 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 WNT5BQ9H1J7 359 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 RNF222A6NCQ9 220 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 B8ZZF3 427 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 C9orf172C9J069 976 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 EEF1E1-BLOC1S5C9J1V9 151 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 HTR3BO95264 441 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 ZNF250P15622 560 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 DTYMKP23919 212 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 ACKR3P25106 362 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 NUP62P37198 522 aaPredicted RBP12.94□□□□□ -0.34
NUP54-217ENST00000514987 FUT6P51993 359 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 AADACL3Q5VUY0 350 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 TCEAL6Q6IPX3 200 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 CLEC18BQ6UXF7 455 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 PXT1Q8NFP0 134 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 AKR7LQ8NHP1 331 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 TCEAL3Q969E4 200 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 TMEM230Q96A57 120 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 ARPC5LQ9BPX5 153 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 RTBDNQ9BSG5 229 aaPredicted RBP12.94□□□□□ -0.34
NUP54-217ENST00000514987 PRDM14Q9GZV8 571 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 RASL12Q9NYN1 266 aa12.94□□□□□ -0.34
NUP54-217ENST00000514987 NOSIPQ9Y314 301 aaKnown RBP12.94□□□□□ -0.34
NUP54-217ENST00000514987 MED12Q93074 2177 aa12.93□□□□□ -0.34
NUP54-217ENST00000514987 hCG_38984A0A1B0GV85 526 aa12.93□□□□□ -0.34
NUP54-217ENST00000514987 C13orf42A0A1B0GVH6 325 aa12.93□□□□□ -0.34
NUP54-217ENST00000514987 FAM230AA0A1W2PPH8 454 aa12.93□□□□□ -0.34
NUP54-217ENST00000514987 PINLYPA6NC86 204 aa12.93□□□□□ -0.34
NUP54-217ENST00000514987 A8MXK9 166 aa12.93□□□□□ -0.34
NUP54-217ENST00000514987 MRPL33O75394 65 aaKnown RBP12.93□□□□□ -0.34
NUP54-217ENST00000514987 SYNGR4O95473 234 aa12.93□□□□□ -0.34
NUP54-217ENST00000514987 RLN2P04090 185 aa12.93□□□□□ -0.34
NUP54-217ENST00000514987 PET100P0DJ07 73 aa12.93□□□□□ -0.34
NUP54-217ENST00000514987 PMELP40967 661 aa12.93□□□□□ -0.34
NUP54-217ENST00000514987 OR8B8Q15620 311 aa12.93□□□□□ -0.34
NUP54-217ENST00000514987 LRRC37A5PQ49AS3 106 aa12.93□□□□□ -0.34
NUP54-217ENST00000514987 SKA3Q8IX90 412 aa12.93□□□□□ -0.34
NUP54-217ENST00000514987 OR2AE1Q8NHA4 323 aa12.93□□□□□ -0.34
NUP54-217ENST00000514987 SPSB4Q96A44 273 aa12.93□□□□□ -0.34
NUP54-217ENST00000514987 CXorf58Q96LI9 332 aa12.93□□□□□ -0.34
NUP54-217ENST00000514987 RNF122Q9H9V4 155 aa12.93□□□□□ -0.34
NUP54-217ENST00000514987 BCO1Q9HAY6 547 aa12.93□□□□□ -0.34
NUP54-217ENST00000514987 MBD2Q9UBB5 411 aa12.93□□□□□ -0.34
NUP54-217ENST00000514987 MEMO1Q9Y316 297 aa12.93□□□□□ -0.34
NUP54-217ENST00000514987 NCKAP5O14513 1909 aa12.93□□□□□ -0.34
NUP54-217ENST00000514987 ZNF816-ZNF321PA0A0X1KG74 233 aa12.92□□□□□ -0.34
NUP54-217ENST00000514987 RPL36A-HNRNPH2H7BZ11 118 aa12.92□□□□□ -0.34
NUP54-217ENST00000514987 M0R296 226 aa12.92□□□□□ -0.34
NUP54-217ENST00000514987 FGF2P09038 288 aa12.92□□□□□ -0.34
NUP54-217ENST00000514987 PGAM2P15259 253 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms