RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 MED30Q96HR3 178 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 PGAM5Q96HS1 289 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 ZNF75AQ96N20 296 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 SEPHS2Q99611 448 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 PRSS27Q9BQR3 290 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 TMEM246Q9BRR3 403 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 RTL8AQ9BWD3 113 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 PAPOLGQ9BWT3 736 aaKnown RBP3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 PRRG3Q9BZD7 231 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 PRSS22Q9GZN4 317 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 C1orf21Q9H246 121 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 MMP27Q9H306 513 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 YY1AP1Q9H869 796 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 REEP1Q9H902 201 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 WDR76Q9H967 626 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 MED4Q9NPJ6 270 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 SAR1AQ9NR31 198 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 MMP26Q9NRE1 261 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 MRPL15Q9P015 296 aaKnown RBP3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 NDUFAF4Q9P032 175 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 GLS2Q9UI32 602 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 KLHL21Q9UJP4 597 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 A4GNTQ9UNA3 340 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 BAIAP2Q9UQB8 552 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 ADAM18Q9Y3Q7 739 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 UGT2A1Q9Y4X1 527 aa3.13□□□□□ -1.91
HMGN1P11-201ENST00000508668 PRR14LQ5THK1 2151 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 A0A087WUU8 490 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 MEIOCA2RUB1 952 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 CD300LBA8K4G0 201 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 A8MXK9 166 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 IQCF6A8MYZ5 107 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 ZNF878C9JN71 531 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 TRAPPC2LH3BP13 241 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 TNFRSF11BO00300 401 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 SLC1A7O00341 560 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 E2F6O75461 281 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 MTRF1O75570 445 aaKnown RBP3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 DCTN3O75935 186 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 CCNB2O95067 398 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 FAM107AO95990 144 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 CYB5AP00167 134 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 GYPAP02724 150 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 THY1P04216 161 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 SFTPBP07988 381 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 CSF1P09603 554 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 MUC1P15941 1255 aaPredicted RBP3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 NCK1P16333 377 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 CTLA4P16410 223 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 HOXB9P17482 250 aaPredicted RBP3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 MDKP21741 143 aaPredicted RBP3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 GABRA5P31644 462 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 CD80P33681 288 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 TGFBR2P37173 567 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 GABRA2P47869 451 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 SOX2P48431 317 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 PCP4P48539 62 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 ENTPD1P49961 510 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 PRKXP51817 358 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 GMFBP60983 142 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 PSME3P61289 254 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 ARF6P62330 175 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 ESRRGP62508 458 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 PAX8Q06710 450 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 EIF2B1Q14232 305 aaKnown RBP3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 ENDOGQ14249 297 aaKnown RBP3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 GK2Q14410 553 aaPredicted RBP3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 TAF9Q16594 264 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 DEFB112Q30KQ8 113 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 CDONQ4KMG0 1287 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 FAM98BQ52LJ0 330 aaKnown RBP3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 MESTQ5EB52 335 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 PRAMEF6Q5VXH4 476 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 WDR25Q64LD2 544 aaPredicted RBP3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 DGAT2L7PQ6IED9 249 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 TMEM88Q6PEY1 159 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 KCTD18Q6PI47 426 aaPredicted RBP3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 C11orf88Q6PI97 169 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 CORO6Q6QEF8 472 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 TBPL2Q6SJ96 375 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 BTN2A1Q7KYR7 527 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 SHFQ7M4L6 423 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 KRT77Q7Z794 578 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 CALHM3Q86XJ0 350 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 PDZD9Q8IXQ8 264 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 OR6V1Q8N148 313 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 C10orf111Q8N326 155 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 ZDHHC22Q8N966 263 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 ZSCAN4Q8NAM6 433 aaPredicted RBP3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 SDR9C7Q8NEX9 313 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 OR2T33Q8NG76 320 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 OR4S1Q8NGB4 309 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 OR4D11Q8NGI4 311 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 OR5D13Q8NGL4 314 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 OR9Q1Q8NGQ5 310 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 PRSS3P2Q8NHM4 247 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 ZNF671Q8TAW3 534 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 LRRC29Q8WV35 223 aa3.12□□□□□ -1.91
HMGN1P11-201ENST00000508668 SLC7A6Q92536 515 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms