RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 CABIN1Q9Y6J0 2220 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 F5P12259 2224 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 TRBV5-5A0A0J9YX44 114 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 ZNF878C9JN71 531 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 FTCDNL1E5RQL4 147 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 H0YIG0 161 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 PLRG1O43660 514 aaKnown RBP6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 APBB3O95704 486 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 ABHD16AO95870 558 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 IGKV1D-16P01601 117 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 RAB4AP20338 218 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 PTGER4P35408 488 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 SLC6A9P48067 706 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 CX3CR1P49238 355 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 DUSP3P51452 185 aaPredicted RBP6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 UCP2P55851 309 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 FZD2Q14332 565 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 TESK1Q15569 626 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 HMGN3Q15651 99 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 ITPRIPL2Q3MIP1 535 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 PLAC9Q5JTB6 97 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 SAPCD1Q5SSQ6 148 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 ZNF684Q5T5D7 378 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 C1orf185Q5T7R7 199 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 AWAT2Q6E213 333 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 STPG4Q8N801 248 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 OR52E1Q8NGJ3 308 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 FIBINQ8TAL6 211 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 GPR119Q8TDV5 335 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 EDAQ92838 391 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 OR2J1Q9GZK6 312 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 LRFN1Q9P244 771 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 GRHPRQ9UBQ7 328 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 ENTPD2Q9Y5L3 495 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 HCFC2Q9Y5Z7 792 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 ZFHX4Q86UP3 3567 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 WDFY4Q6ZS81 3184 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 TRBV6-7A0A0A0MS04 114 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 A0A1W2PPV9 198 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 SCDO00767 359 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 NXPH2O95156 264 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 SRP19P09132 144 aaKnown RBP6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 EGR1P18146 543 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 SPINK2P20155 84 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 AKT2P31751 481 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 RBMXP38159 391 aaKnown RBP6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 CDKN1AP38936 164 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 GLIPR1P48060 266 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 HINT1P49773 126 aaPredicted RBP6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 RIPPLY3P57055 190 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 CYCSP99999 105 aaKnown RBP6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 LBHQ53QV2 105 aaPredicted RBP6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 GPR157Q5UAW9 335 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 CBLN3Q6UW01 205 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 DPPA3Q6W0C5 159 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 TMEM183AQ8IXX5 376 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 OR5L1Q8NGL2 311 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 RPUSD4Q96CM3 377 aaKnown RBP6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 TVP23CQ96ET8 276 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 ADGRG7Q96K78 797 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 SPACA7Q96KW9 195 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 ZNF681Q96N22 645 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 TMEM106CQ9BVX2 250 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 NXT1Q9UKK6 140 aaKnown RBP6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 CES1P1Q9UKY3 287 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 YBX2Q9Y2T7 364 aaKnown RBP6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 KIAA1549Q9HCM3 1950 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 TRBV5-7A0A0A0MS05 114 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 C20orf202A1L168 122 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 TP53I11O14683 189 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 VSIG8P0DPA2 414 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 RPS16P62249 146 aaKnown RBP6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 SRSF4Q08170 494 aaKnown RBP6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 TCTN1Q2MV58 587 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 ALG10Q5BKT4 473 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 TCEAL5Q5H9L2 206 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 OPN5Q6U736 354 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 TCF23Q7RTU1 214 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 ADGRE4PQ86SQ3 457 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 SGPP2Q8IWX5 399 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 ZNF619Q8N2I2 560 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 RCBTB1Q8NDN9 531 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 SLC26A10Q8NG04 563 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 OR11L1Q8NGX0 322 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 OR5R1Q8NH85 324 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 FNDC9Q8TBE3 224 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 SLC2A12Q8TD20 617 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 PLD4Q96BZ4 506 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 KTI12Q96EK9 354 aaPredicted RBP6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 MRI1Q9BV20 369 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 TRIM2Q9C040 744 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 B3GAT1Q9P2W7 334 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 PITPNC1Q9UKF7 332 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 GPR132Q9UNW8 380 aa6.41□□□□□ -1.38
LIMCH1-207ENST00000508466 A0A087WUJ7 227 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 ELOA3CA0A087WX78 387 aaPredicted RBP6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 A0A0A6YYD4 124 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 A0A0B4J2E0 115 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 CCL15-CCL14A0A0B4J2E2 113 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 A0A1B0GX12 115 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms