RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 PNLIPRP3Q17RR3 467 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 PCGF3Q3KNV8 242 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 HIKESHIQ53FT3 197 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 RNASE12Q5GAN4 147 aaKnown RBP8.87□□□□□ -0.99
HDAC3-214ENST00000495485 PLCXD3Q63HM9 321 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 TMEM42Q69YG0 159 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 MRGPRGQ86SM5 289 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 AKAP14Q86UN6 197 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 MDP1Q86V88 176 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 CADM3Q8N126 398 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 OR51T1Q8NGJ9 327 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 OR2AE1Q8NHA4 323 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 LILRB4Q8NHJ6 448 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 CA5BP1Q8WTZ4 195 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 NEDD4LQ96PU5 975 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 AUNIPQ9H7T9 357 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 ELL3Q9HB65 397 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-214ENST00000495485 GPR173Q9NS66 373 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 MPC1Q9Y5U8 109 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 HCFC1P51610 2035 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 IGKV1-9A0A0C4DH69 117 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 FAM230AA0A1W2PPH8 454 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 TPD52L2O43399 206 aaKnown RBP8.86□□□□□ -0.99
HDAC3-214ENST00000495485 LANCL1O43813 399 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 CLDN14O95500 239 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 TCRBP04435 133 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 MELTFP08582 738 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 GTF2F2P13984 249 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 SPNP16150 400 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 TBPP20226 339 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 IL32P24001 234 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 RAD52P43351 418 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 SRP9P49458 86 aaKnown RBP8.86□□□□□ -0.99
HDAC3-214ENST00000495485 VEGFCP49767 419 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 EFNB2P52799 333 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 FOXG1P55316 489 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-214ENST00000495485 GNG2P59768 71 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 MRPS15P82914 257 aaKnown RBP8.86□□□□□ -0.99
HDAC3-214ENST00000495485 MEF2DQ14814 521 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 FBXL19-AS1Q494R0 122 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 CDNFQ49AH0 187 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 OLFML2AQ68BL7 652 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 BTN2A1Q7KYR7 527 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 ZNF584Q8IVC4 421 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 MKXQ8IYA7 352 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 SAXO1Q8IYX7 474 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 FAM169BQ8N8A8 192 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 ZSCAN4Q8NAM6 433 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-214ENST00000495485 TMEM229BQ8NBD8 167 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 ACBD4Q8NC06 268 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 PXT1Q8NFP0 134 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 OR5A2Q8NGI9 324 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 OR56B4Q8NH76 319 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 GPX8Q8TED1 209 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 RAB3CQ96E17 227 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 SOX7Q9BT81 388 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 HRASLSQ9HDD0 168 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 IFT46Q9NQC8 304 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 PTTG3PQ9NZH4 202 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 PLEKHA6Q9Y2H5 1048 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 SPEF1Q9Y4P9 236 aa8.86□□□□□ -0.99
HDAC3-214ENST00000495485 HMX3A6NHT5 357 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 SERPINE3A8MV23 424 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 DISC1C4P0D8 188 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 ICMTO60725 284 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 LYZL6O75951 148 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 MGMTP16455 207 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 ZNF14P17017 642 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-214ENST00000495485 PSMB1P20618 241 aaKnown RBP8.85□□□□□ -0.99
HDAC3-214ENST00000495485 ACKR3P25106 362 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 GIFP27352 417 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 OR3A4PP47883 348 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 RPS27AP62979 156 aaKnown RBP8.85□□□□□ -0.99
HDAC3-214ENST00000495485 QRFPP83859 136 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 ADORA2A-AS1P86434 159 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 HGFACQ04756 655 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 MZT1Q08AG7 82 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 GK2Q14410 553 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-214ENST00000495485 ZMYND11Q15326 602 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 CEACAM21Q3KPI0 293 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 C3orf36Q3SXR2 165 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 ZNF260Q3ZCT1 412 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 SLC22A6Q4U2R8 563 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 PLA1AQ53H76 456 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 ACTBL2Q562R1 376 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 VWA1Q6PCB0 445 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 ZNF782Q6ZMW2 699 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-214ENST00000495485 Q6ZTK2 550 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 BHLHA15Q7RTS1 189 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-214ENST00000495485 ZDHHC23Q8IYP9 409 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 PAQR4Q8N4S7 273 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-214ENST00000495485 CELF2-AS1Q8N7Q2 184 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 NPRL2Q8WTW4 380 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 ITLN2Q8WWU7 325 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-214ENST00000495485 STARD4Q96DR4 205 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 MUCL1Q96DR8 90 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 SPACA5Q96QH8 159 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 PAPOLGQ9BWT3 736 aaKnown RBP8.85□□□□□ -0.99
HDAC3-214ENST00000495485 BCL2L14Q9BZR8 327 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 MMP28Q9H239 520 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms