RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 HAGHLQ6PII5 290 aaPredicted RBP10.37□□□□□ -0.75
HSPG2-212ENST00000493940 Q6YL49 198 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 VMO1Q7Z5L0 202 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 COMMD2Q86X83 199 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 CATSPERDQ86XM0 798 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 CALHM1Q8IU99 346 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 RDH10Q8IZV5 341 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 PNKDQ8N490 385 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 ZNRF1Q8ND25 227 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 OR5A2Q8NGI9 324 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 FAM81AQ8TBF8 368 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 MBOAT4Q96T53 435 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 DCTN5Q9BTE1 182 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 CNTD2Q9H8S5 307 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 TRIM36Q9NQ86 728 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 PCDHGB1Q9Y5G3 927 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 MGAM2Q2M2H8 2515 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 WNK1Q9H4A3 2382 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 IGKV1-27A0A075B6S5 117 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 IGHV1-69DA0A0B4J2H0 117 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 A0A0U1RQK1 487 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 OR2AT4A6NND4 320 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 F8VVB4 439 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 F8VWA3 439 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 RNASEK-C17orf49H0YIS7 233 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 J3QRE1 110 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 CIB2O75838 187 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 DHRS3O75911 302 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 NRASP01111 189 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 IGHV1-69P01742 117 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 LIPFP07098 398 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 ACAA1P09110 424 aaPredicted RBP10.36□□□□□ -0.75
HSPG2-212ENST00000493940 CCL1P22362 96 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 GLRA1P23415 457 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 OMGP23515 440 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 ERVFRD-1P60508 538 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 ISL1P61371 349 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 RELBQ01201 579 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 EGR3Q06889 387 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 ZNF829Q3KNS6 432 aaPredicted RBP10.36□□□□□ -0.75
HSPG2-212ENST00000493940 TP53I3Q53FA7 332 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 GPR157Q5UAW9 335 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 PLCXD3Q63HM9 321 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 RBMS3Q6XE24 437 aaKnown RBP10.36□□□□□ -0.75
HSPG2-212ENST00000493940 RNF144BQ7Z419 303 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 ANGPTL5Q86XS5 388 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 GID4Q8IVV7 300 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 CD177Q8N6Q3 437 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 YIPF7Q8N8F6 280 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 PNLDC1Q8NA58 520 aaKnown RBP10.36□□□□□ -0.75
HSPG2-212ENST00000493940 SGMS2Q8NHU3 365 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 C8orf46Q8TAG6 207 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 TNFRSF14Q92956 283 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 C12orf43Q96C57 262 aaKnown RBP10.36□□□□□ -0.75
HSPG2-212ENST00000493940 HRASLS5Q96KN8 279 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 USE1Q9NZ43 259 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 NLKQ9UBE8 527 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 WARS2Q9UGM6 360 aaKnown RBP10.36□□□□□ -0.75
HSPG2-212ENST00000493940 VWFP04275 2813 aa10.36□□□□□ -0.75
HSPG2-212ENST00000493940 A0A1W2PRD5 423 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 A0A1W2PRF3 423 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 A0A1W2PRM7 423 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 PQLC2LA1A4F0 135 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 METTL15A6NJ78 407 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 CLDN34H7C241 214 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 SIGLEC5O15389 551 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 NDUFB3O43676 98 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 ECDO95905 644 aaPredicted RBP10.35□□□□□ -0.75
HSPG2-212ENST00000493940 MELTFP08582 738 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 OR2T7P0C7T2 308 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 ATP6V1B1P15313 513 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 GABRB1P18505 474 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 GABRA2P47869 451 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 MTNR1AP48039 350 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 SRSF4Q08170 494 aaKnown RBP10.35□□□□□ -0.75
HSPG2-212ENST00000493940 UBE2V2Q15819 145 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 CDONQ4KMG0 1287 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 BCL2L15Q5TBC7 163 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 ZBTB37Q5TC79 503 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 METTL11BQ5VVY1 283 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 HCP5Q6MZN7 132 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 ACP7Q6ZNF0 438 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 SLC36A1Q7Z2H8 476 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 THAP5Q7Z6K1 395 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 FTMTQ8N4E7 242 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 CBR4Q8N4T8 237 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 C3orf56Q8N813 242 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 OR10H4Q8NGA5 316 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 OR8J1Q8NGP2 316 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 OR2T27Q8NH04 317 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 H1FXQ92522 213 aaKnown RBP10.35□□□□□ -0.75
HSPG2-212ENST00000493940 HIST1H2AAQ96QV6 131 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 MNTQ99583 582 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 RBM4BQ9BQ04 359 aaKnown RBP10.35□□□□□ -0.75
HSPG2-212ENST00000493940 PRRG3Q9BZD7 231 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 CHIAQ9BZP6 476 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 ABCB9Q9NP78 766 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 SIRT7Q9NRC8 400 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 ENPP5Q9UJA9 477 aa10.35□□□□□ -0.75
HSPG2-212ENST00000493940 SNX5Q9Y5X3 404 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms