RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 RNFT2Q96EX2 444 aa7.58□□□□□ -1.2
HDAC6-232ENST00000489053 WDFY2Q96P53 400 aa7.58□□□□□ -1.2
HDAC6-232ENST00000489053 DNTTIP1Q9H147 329 aa7.58□□□□□ -1.2
HDAC6-232ENST00000489053 TLNRD1Q9H1K6 362 aa7.58□□□□□ -1.2
HDAC6-232ENST00000489053 CNTD2Q9H8S5 307 aa7.58□□□□□ -1.2
HDAC6-232ENST00000489053 NEK6Q9HC98 313 aa7.58□□□□□ -1.2
HDAC6-232ENST00000489053 KAAG1Q9UBP8 84 aa7.58□□□□□ -1.2
HDAC6-232ENST00000489053 CTSZQ9UBR2 303 aa7.58□□□□□ -1.2
HDAC6-232ENST00000489053 SLC25A10Q9UBX3 287 aaPredicted RBP7.58□□□□□ -1.2
HDAC6-232ENST00000489053 MRM2Q9UI43 246 aaKnown RBP7.58□□□□□ -1.2
HDAC6-232ENST00000489053 RPUSD1Q9UJJ7 312 aaKnown RBP7.58□□□□□ -1.2
HDAC6-232ENST00000489053 CAB39Q9Y376 341 aaPredicted RBP7.58□□□□□ -1.2
HDAC6-232ENST00000489053 hCG_1809904A0A1W2PP81 198 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 A0A1W2PPE2 198 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 FAM230AA0A1W2PPH8 454 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 A0A1W2PQL4 384 aaPredicted RBP7.57□□□□□ -1.2
HDAC6-232ENST00000489053 A0A1W2PR64 198 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 A0A1W2PRV1 198 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 ANKRD61A6NGH8 418 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 DHRS7CA6NNS2 312 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 H3BSH0 61 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 J3QT63 122 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 DLGAP1O14490 977 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 PAHP00439 452 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 TTRP02766 147 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 ALPLP05186 524 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 UBCP0CG48 685 aaKnown RBP7.57□□□□□ -1.2
HDAC6-232ENST00000489053 POLR2IP36954 125 aaKnown RBP7.57□□□□□ -1.2
HDAC6-232ENST00000489053 HAAOP46952 286 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 ACTA2P62736 377 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 ACTG2P63267 376 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 GUCA2AQ02747 115 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 FOXL1Q12952 345 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 CDONQ4KMG0 1287 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 KLF17Q5JT82 389 aaPredicted RBP7.57□□□□□ -1.2
HDAC6-232ENST00000489053 STUMQ69YW2 141 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 FIP1L1Q6UN15 594 aaKnown RBP7.57□□□□□ -1.2
HDAC6-232ENST00000489053 ZBTB49Q6ZSB9 765 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 C11orf53Q8IXP5 236 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 PDZD9Q8IXQ8 264 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 FAM185AQ8N0U4 392 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 BCL6BQ8N143 479 aaPredicted RBP7.57□□□□□ -1.2
HDAC6-232ENST00000489053 ZNF555Q8NEP9 628 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 HPSE2Q8WWQ2 592 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 WDR13Q9H1Z4 485 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 OR51I2Q9H344 312 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 PPP1R3EQ9H7J1 279 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 SMURF1Q9HCE7 757 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 TNFRSF19Q9NS68 423 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 RASL12Q9NYN1 266 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 USE1Q9NZ43 259 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 KPTNQ9Y664 436 aa7.57□□□□□ -1.2
HDAC6-232ENST00000489053 A6NIN4 97 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 PRR32B1ATL7 298 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 H0YAE9 185 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 ENTPD6O75354 484 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 FADS2O95864 444 aaKnown RBP7.56□□□□□ -1.2
HDAC6-232ENST00000489053 SFTPBP07988 381 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 HTR1AP08908 422 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 ACAA1P09110 424 aaPredicted RBP7.56□□□□□ -1.2
HDAC6-232ENST00000489053 SNRPGP62308 76 aaKnown RBP7.56□□□□□ -1.2
HDAC6-232ENST00000489053 EFNB1P98172 346 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 PAX2Q02962 417 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 CNN3Q15417 329 aaKnown RBP7.56□□□□□ -1.2
HDAC6-232ENST00000489053 TP53I3Q53FA7 332 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 DMRTC1Q5HYR2 192 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 TMEM244Q5VVB8 128 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 C9orf139Q6ZV77 190 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 VMO1Q7Z5L0 202 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 KCTD20Q7Z5Y7 419 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 CATSPERDQ86XM0 798 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 ZDHHC22Q8N966 263 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 TRMT10AQ8TBZ6 339 aaKnown RBP7.56□□□□□ -1.2
HDAC6-232ENST00000489053 TBC1D15Q8TC07 691 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 NPRL2Q8WTW4 380 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 AQP3Q92482 292 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 PPP1R14AQ96A00 147 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 BORCS8Q96FH0 119 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 HRASLS5Q96KN8 279 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 S100A14Q9HCY8 104 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 NOX4Q9NPH5 578 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 OR14J1Q9UGF5 321 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 SLC22A13Q9Y226 551 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 V9GYS6 101 aa7.56□□□□□ -1.2
HDAC6-232ENST00000489053 TRBV23-1A0A0A0MS06 115 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 IGHV1-69DA0A0B4J2H0 117 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 LOC107986453A0A1B0GWG9 222 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 H3BNX3 289 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 J3QLW9 94 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 SIGLEC5O15389 551 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 SLC16A6O15403 523 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 HOXA3O43365 443 aaPredicted RBP7.55□□□□□ -1.2
HDAC6-232ENST00000489053 RHBDL1O75783 438 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 PLATP00750 562 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 IGHV1-69P01742 117 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 RNASE1P07998 156 aaKnown RBP7.55□□□□□ -1.2
HDAC6-232ENST00000489053 RPSAP08865 295 aaKnown RBP7.55□□□□□ -1.2
HDAC6-232ENST00000489053 ZNF19P17023 458 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 FUT6P51993 359 aa7.55□□□□□ -1.2
HDAC6-232ENST00000489053 ATP1B3P54709 279 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms