RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 BAALCQ8WXS3 180 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 RAB1CQ92928 201 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 FBXO32Q969P5 355 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 ISG20Q96AZ6 181 aaKnown RBP0.39□□□□□ -2.35
CCDC93-209ENST00000488908 RNF170Q96K19 258 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 PPP1R36Q96LQ0 422 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 UQCC2Q9BRT2 126 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 KIR3DX1Q9H7L2 352 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 SND1-IT1Q9HBX3 110 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 EXTL2Q9UBQ6 330 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 NAGKQ9UJ70 344 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 ZNF443Q9Y2A4 671 aaPredicted RBP0.39□□□□□ -2.35
CCDC93-209ENST00000488908 ZNF257Q9Y2Q1 563 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 OR51B4Q9Y5P0 310 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 ENPP4Q9Y6X5 453 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 STRCP1A6NGW2 1772 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 KMT2EQ8IZD2 1858 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 GBF1Q92538 1859 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 ELP1O95163 1332 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 A0A0B4J2C4 111 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 ZNF729A6NN14 1252 aaPredicted RBP0.38□□□□□ -2.35
CCDC93-209ENST00000488908 LSM1O15116 133 aaKnown RBP0.38□□□□□ -2.35
CCDC93-209ENST00000488908 RGS5O15539 181 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 SLC19A2O60779 497 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 CRTAPO75718 401 aaPredicted RBP0.38□□□□□ -2.35
CCDC93-209ENST00000488908 CCNB2O95067 398 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 SEC11BP0C7V7 166 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 GFAPP14136 432 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 TEAD1P28347 426 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 GTF2E2P29084 291 aaKnown RBP0.38□□□□□ -2.35
CCDC93-209ENST00000488908 CFHR2P36980 270 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 RFC3P40938 356 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 ZNF33AQ06730 810 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 DHRS2Q13268 280 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 CST6Q15828 149 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 MRPL23Q16540 153 aaKnown RBP0.38□□□□□ -2.35
CCDC93-209ENST00000488908 ANKDD1AQ495B1 522 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 N4BP2L1Q5TBK1 243 aaPredicted RBP0.38□□□□□ -2.35
CCDC93-209ENST00000488908 OR2T5Q6IEZ7 315 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 FAM228AQ86W67 206 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 UNC93AQ86WB7 457 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 RAB43Q86YS6 212 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 ITPRIPQ8IWB1 547 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 SLC30A8Q8IWU4 369 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 AMN1Q8IY45 258 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 Q8NAQ8 132 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 OR2T29Q8NH02 315 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 FAM57AQ8TBR7 257 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 GPR119Q8TDV5 335 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 APOBEC3DQ96AK3 386 aaPredicted RBP0.38□□□□□ -2.35
CCDC93-209ENST00000488908 C8orf44Q96CB5 159 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 RCN3Q96D15 328 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 TPD52L3Q96J77 140 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 OR8B2Q96RD0 313 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 THTPAQ9BU02 230 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 C20orf24Q9BUV8 137 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 TTTY12Q9BZ98 90 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 UCK2Q9BZX2 261 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 RHOFQ9HBH0 211 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 ACP6Q9NPH0 428 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 LYARQ9NX58 379 aaKnown RBP0.38□□□□□ -2.35
CCDC93-209ENST00000488908 NDRG2Q9UN36 371 aaKnown RBP0.38□□□□□ -2.35
CCDC93-209ENST00000488908 FADS3Q9Y5Q0 445 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 ZNF780BQ9Y6R6 833 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 KMT2DO14686 5537 aa0.38□□□□□ -2.35
CCDC93-209ENST00000488908 NUP205Q92621 2012 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 IGHV3-21A0A0B4J1V1 117 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 ZNF860A6NHJ4 632 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 ERI3O43414 337 aaKnown RBP0.37□□□□□ -2.35
CCDC93-209ENST00000488908 RNF13O43567 381 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 CLTAP09496 248 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 GZMAP12544 262 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 CRABP2P29373 138 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 HMOX2P30519 316 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 MAGEA6P43360 314 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 PSMB2P49721 201 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 ST3GAL4Q11206 333 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 MERTKQ12866 999 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 TRMT5Q32P41 509 aaKnown RBP0.37□□□□□ -2.35
CCDC93-209ENST00000488908 TMEM176BQ3YBM2 270 aaPredicted RBP0.37□□□□□ -2.35
CCDC93-209ENST00000488908 FBXL19-AS1Q494R0 122 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 KDM4DQ6B0I6 523 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 CENPQQ7L2Z9 268 aaPredicted RBP0.37□□□□□ -2.35
CCDC93-209ENST00000488908 OTUD6AQ7L8S5 288 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 OR5AR1Q8NGP9 310 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 BLNKQ8WV28 456 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 RXFP2Q8WXD0 754 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 APH1AQ96BI3 265 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 RASD2Q96D21 266 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 FAM19A4Q96LR4 140 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 GSDMAQ96QA5 445 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 TGS1Q96RS0 853 aaKnown RBP0.37□□□□□ -2.35
CCDC93-209ENST00000488908 NAPGQ99747 312 aaPredicted RBP0.37□□□□□ -2.35
CCDC93-209ENST00000488908 TMEM175Q9BSA9 504 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 NUP58Q9BVL2 599 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 STMN4Q9H169 189 aaPredicted RBP0.37□□□□□ -2.35
CCDC93-209ENST00000488908 TXNIPQ9H3M7 391 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 BEX1Q9HBH7 125 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 TMEM38BQ9NVV0 291 aa0.37□□□□□ -2.35
CCDC93-209ENST00000488908 RCL1Q9Y2P8 373 aaKnown RBP0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms