RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 CTSCP53634 463 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 CRISP1P54107 249 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 RAB8AP61006 207 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 PAFAH1B2P68402 229 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 SRSF4Q08170 494 aaKnown RBP5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 MFAP5Q13361 173 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 EIF2B1Q14232 305 aaKnown RBP5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 MLF2Q15773 248 aaPredicted RBP5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 LRRC75BQ2VPJ9 315 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 COL5A1-AS1Q5SY13 56 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 PAQR6Q6TCH4 344 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 Q6ZT83 130 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 MBOAT2Q6ZWT7 520 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 LARP4Q71RC2 724 aaKnown RBP eCLIP5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 IZUMO1Q8IYV9 350 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 CHST4Q8NCG5 386 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 SSC4DQ8WTU2 575 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 TFB1MQ8WVM0 346 aaKnown RBP5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 PYCR2Q96C36 320 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 CCDC126Q96EE4 140 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 GRAMD2BQ96HH9 432 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 WDR92Q96MX6 357 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 FAIM2Q9BWQ8 316 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 ZNF385DQ9H6B1 395 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 ZNF703Q9H7S9 590 aaPredicted RBP5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 ZDHHC11Q9H8X9 412 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 PHPT1Q9NRX4 125 aaPredicted RBP5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 STARD5Q9NSY2 213 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 IL36GQ9NZH8 169 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 PRODH2Q9UF12 536 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 KCNS2Q9ULS6 477 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 UBQLN1Q9UMX0 589 aaKnown RBP5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 V9GYS6 101 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 TANC1Q9C0D5 1861 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 OTOGQ6ZRI0 2925 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 SMCHD1A6NHR9 2005 aa5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 FNDC1Q4ZHG4 1894 aaPredicted RBP5.28□□□□□ -1.56
SMARCE1-208ENST00000474246 NSG1A0A0A6YYJ2 146 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 FAM95CA0A1B0GW59 222 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 FAM159BA6NKW6 160 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 B4DGG1 531 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 LMO7DNF2Z398 122 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 GFYI3L273 518 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 CCL25O15444 150 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 GNG7O60262 68 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 TRAPPC6AO75865 159 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 AGFG2O95081 481 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 IL6RP08887 468 aaPredicted RBP5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 IRF2P14316 349 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 HOXB9P17482 250 aaPredicted RBP5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 GRPRP30550 384 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 MNDAP41218 407 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 NSG1P42857 185 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 MAGEA5P43359 124 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 CXCL12P48061 93 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 TAS2R31P59538 309 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 HIST3H3Q16695 136 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 AKR1C8PQ5T2L2 129 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 CPTPQ5TA50 214 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 LAMTOR1Q6IAA8 161 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 GRHL2Q6ISB3 625 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 GSG1LQ6UXU4 331 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 FRRS1Q6ZNA5 592 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 ABHD12Q8N2K0 398 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 CBR4Q8N4T8 237 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 IQCF1Q8N6M8 205 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 MDS2Q8NDY4 140 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 OR6T1Q8NGN1 323 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 OR5B3Q8NH48 314 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 GPR119Q8TDV5 335 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 CYGBQ8WWM9 190 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 SMIM8Q96KF7 97 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 DNAJC30Q96LL9 226 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 RBP7Q96R05 134 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 MARVELD1Q9BSK0 173 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 C16orf70Q9BSU1 422 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 NDC1Q9BTX1 674 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 FAM49AQ9H0Q0 323 aaPredicted RBP5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 FAM234AQ9H0X4 552 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 SLC25A51Q9H1U9 297 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 RETNQ9HD89 108 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 B3GAT2Q9NPZ5 323 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 ABHD10Q9NUJ1 306 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 SPANXCQ9NY87 97 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 HSPB8Q9UJY1 196 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 AK6Q9Y3D8 172 aaKnown RBP5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 WDR81Q562E7 1941 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 FLNCQ14315 2725 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 ZNFX1Q9P2E3 1918 aaKnown RBP5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 ZNF816-ZNF321PA0A0X1KG74 233 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 ANKRD20A5PA0PJZ0 165 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 MAP1LC3B2A6NCE7 125 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 SERINC4A6NH21 518 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 PLPP1O14494 284 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 DVL1O14640 695 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 PPP1R11O60927 126 aaPredicted RBP5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 ALOX12BO75342 701 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 MT-CO3P00414 261 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms