RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 J3QLI3 93 aa13.2□□□□□ -0.3
ERCC3-206ENST00000462306 AKR7A2O43488 359 aa13.2□□□□□ -0.3
ERCC3-206ENST00000462306 MUC1P15941 1255 aaPredicted RBP13.2□□□□□ -0.3
ERCC3-206ENST00000462306 ZNF12P17014 697 aa13.2□□□□□ -0.3
ERCC3-206ENST00000462306 ETV1P50549 477 aa13.2□□□□□ -0.3
ERCC3-206ENST00000462306 GNB2P62879 340 aa13.2□□□□□ -0.3
ERCC3-206ENST00000462306 UBE2V2Q15819 145 aa13.2□□□□□ -0.3
ERCC3-206ENST00000462306 MICBQ29980 383 aa13.2□□□□□ -0.3
ERCC3-206ENST00000462306 WDR25Q64LD2 544 aaPredicted RBP13.2□□□□□ -0.3
ERCC3-206ENST00000462306 OR10AC1Q8NH08 325 aa13.2□□□□□ -0.3
ERCC3-206ENST00000462306 GGHQ92820 318 aa13.2□□□□□ -0.3
ERCC3-206ENST00000462306 DACT3Q96B18 629 aaPredicted RBP13.2□□□□□ -0.3
ERCC3-206ENST00000462306 C10orf35Q96D05 121 aa13.2□□□□□ -0.3
ERCC3-206ENST00000462306 WDR13Q9H1Z4 485 aa13.2□□□□□ -0.3
ERCC3-206ENST00000462306 PLEKHA1Q9HB21 404 aa13.2□□□□□ -0.3
ERCC3-206ENST00000462306 KAAG1Q9UBP8 84 aa13.2□□□□□ -0.3
ERCC3-206ENST00000462306 CLN8Q9UBY8 286 aa13.2□□□□□ -0.3
ERCC3-206ENST00000462306 OPN4Q9UHM6 478 aa13.2□□□□□ -0.3
ERCC3-206ENST00000462306 DIMT1Q9UNQ2 313 aaKnown RBP13.2□□□□□ -0.3
ERCC3-206ENST00000462306 ADAM20O43506 726 aa13.19□□□□□ -0.3
ERCC3-206ENST00000462306 FCN3O75636 299 aa13.19□□□□□ -0.3
ERCC3-206ENST00000462306 AMY2BP19961 511 aa13.19□□□□□ -0.3
ERCC3-206ENST00000462306 AQP4P55087 323 aa13.19□□□□□ -0.3
ERCC3-206ENST00000462306 MRPL28Q13084 256 aaKnown RBP13.19□□□□□ -0.3
ERCC3-206ENST00000462306 HAGHLQ6PII5 290 aaPredicted RBP13.19□□□□□ -0.3
ERCC3-206ENST00000462306 OR51A4Q8NGJ6 313 aa13.19□□□□□ -0.3
ERCC3-206ENST00000462306 C12orf43Q96C57 262 aaKnown RBP13.19□□□□□ -0.3
ERCC3-206ENST00000462306 ADAT3Q96EY9 351 aaPredicted RBP13.19□□□□□ -0.3
ERCC3-206ENST00000462306 CHST5Q9GZS9 411 aa13.19□□□□□ -0.3
ERCC3-206ENST00000462306 C7orf69Q9H7B7 122 aa13.19□□□□□ -0.3
ERCC3-206ENST00000462306 SMURF1Q9HCE7 757 aa13.19□□□□□ -0.3
ERCC3-206ENST00000462306 PLCXD1Q9NUJ7 323 aa13.19□□□□□ -0.3
ERCC3-206ENST00000462306 OR5V1Q9UGF6 321 aa13.19□□□□□ -0.3
ERCC3-206ENST00000462306 CAB39Q9Y376 341 aaPredicted RBP13.19□□□□□ -0.3
ERCC3-206ENST00000462306 INSIG2Q9Y5U4 225 aa13.19□□□□□ -0.3
ERCC3-206ENST00000462306 MXRA5Q9NR99 2828 aa13.19□□□□□ -0.3
ERCC3-206ENST00000462306 LOC105371242A0A075B767 164 aa13.18□□□□□ -0.3
ERCC3-206ENST00000462306 H0YHG0 523 aa13.18□□□□□ -0.3
ERCC3-206ENST00000462306 XPNPEP2O43895 674 aa13.18□□□□□ -0.3
ERCC3-206ENST00000462306 ZFPL1O95159 310 aa13.18□□□□□ -0.3
ERCC3-206ENST00000462306 PIPP12273 146 aaPredicted RBP13.18□□□□□ -0.3
ERCC3-206ENST00000462306 SRP14P37108 136 aaKnown RBP13.18□□□□□ -0.3
ERCC3-206ENST00000462306 HAAOP46952 286 aa13.18□□□□□ -0.3
ERCC3-206ENST00000462306 TGM4P49221 684 aa13.18□□□□□ -0.3
ERCC3-206ENST00000462306 GBX2P52951 348 aaPredicted RBP13.18□□□□□ -0.3
ERCC3-206ENST00000462306 GMFBP60983 142 aa13.18□□□□□ -0.3
ERCC3-206ENST00000462306 ATPAF1Q5TC12 328 aaPredicted RBP13.18□□□□□ -0.3
ERCC3-206ENST00000462306 OR2G6Q5TZ20 316 aa13.18□□□□□ -0.3
ERCC3-206ENST00000462306 STUMQ69YW2 141 aa13.18□□□□□ -0.3
ERCC3-206ENST00000462306 ZNF573Q86YE8 665 aa13.18□□□□□ -0.3
ERCC3-206ENST00000462306 ZNF671Q8TAW3 534 aa13.18□□□□□ -0.3
ERCC3-206ENST00000462306 PP6455Q8WZ26 134 aa13.18□□□□□ -0.3
ERCC3-206ENST00000462306 TMEM80Q96HE8 168 aa13.18□□□□□ -0.3
ERCC3-206ENST00000462306 RASSF4Q9H2L5 321 aa13.18□□□□□ -0.3
ERCC3-206ENST00000462306 ERVK-18Q9QC07 812 aa13.18□□□□□ -0.3
ERCC3-206ENST00000462306 CLEC2DQ9UHP7 191 aa13.18□□□□□ -0.3
ERCC3-206ENST00000462306 PSORS1C1Q9UIG5 152 aa13.18□□□□□ -0.3
ERCC3-206ENST00000462306 HHLA2Q9UM44 414 aa13.18□□□□□ -0.3
ERCC3-206ENST00000462306 EXOSC1Q9Y3B2 195 aaKnown RBP13.18□□□□□ -0.3
ERCC3-206ENST00000462306 CUBNO60494 3623 aa13.18□□□□□ -0.3
ERCC3-206ENST00000462306 IGKV1-27A0A075B6S5 117 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 IGHV2-70DA0A0C4DH43 119 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 A0A1B0GW55 424 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 J3QT63 122 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 SYNGR1O43759 233 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 IFNA2P01563 188 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 DUX4L2P0CJ85 424 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 DUX4L3P0CJ86 424 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 DUX4L4P0CJ87 422 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 DUX4L5P0CJ88 424 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 DUX4L6P0CJ89 424 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 DUX4L7P0CJ90 424 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 MPZP25189 248 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 NPY4RP50391 375 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 GTF2A1P52655 376 aaPredicted RBP13.17□□□□□ -0.3
ERCC3-206ENST00000462306 PAX8Q06710 450 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 ST3GAL4Q11206 333 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 XAF1Q6GPH4 301 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 DUX4L9Q6RFH8 374 aaPredicted RBP13.17□□□□□ -0.3
ERCC3-206ENST00000462306 CALHM1Q8IU99 346 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 ZNF676Q8N7Q3 588 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 OR5T2Q8NGG2 359 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 TRMT10AQ8TBZ6 339 aaKnown RBP13.17□□□□□ -0.3
ERCC3-206ENST00000462306 HAVCR2Q8TDQ0 301 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 NPRL2Q8WTW4 380 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 RAB40AQ8WXH6 277 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 FGGYQ96C11 551 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 TECTBQ96PL2 329 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 CCL13Q99616 98 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 PDCD1LG2Q9BQ51 273 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 SNTG1Q9NSN8 517 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 CNOT2Q9NZN8 540 aaKnown RBP13.17□□□□□ -0.3
ERCC3-206ENST00000462306 DUX4Q9UBX2 424 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 SLC7A11Q9UPY5 501 aa13.17□□□□□ -0.3
ERCC3-206ENST00000462306 DOCK11Q5JSL3 2073 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 IGKV1-9A0A0C4DH69 117 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 KIR2DS1A0A191URI9 304 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 FAM230AA0A1W2PPH8 454 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 EFCAB10A6NFE3 127 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 TMEM212A6NML5 194 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms