RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 LIPFP07098 398 aa12.44□□□□□ -0.42
ATG4B-213ENST00000460211 GLRA1P23415 457 aa12.44□□□□□ -0.42
ATG4B-213ENST00000460211 FPR2P25090 351 aa12.44□□□□□ -0.42
ATG4B-213ENST00000460211 GMFBP60983 142 aa12.44□□□□□ -0.42
ATG4B-213ENST00000460211 HOXA4Q00056 320 aaPredicted RBP12.44□□□□□ -0.42
ATG4B-213ENST00000460211 PAX8Q06710 450 aa12.44□□□□□ -0.42
ATG4B-213ENST00000460211 IL18R1Q13478 541 aa12.44□□□□□ -0.42
ATG4B-213ENST00000460211 ARMCX4Q5H9R4 360 aa12.44□□□□□ -0.42
ATG4B-213ENST00000460211 ZNF691Q5VV52 312 aa12.44□□□□□ -0.42
ATG4B-213ENST00000460211 FDX2Q6P4F2 183 aa12.44□□□□□ -0.42
ATG4B-213ENST00000460211 HAGHLQ6PII5 290 aaPredicted RBP12.44□□□□□ -0.42
ATG4B-213ENST00000460211 ZNF841Q6ZN19 808 aa12.44□□□□□ -0.42
ATG4B-213ENST00000460211 C1orf229Q6ZS94 237 aaPredicted RBP12.44□□□□□ -0.42
ATG4B-213ENST00000460211 LHFPL3Q86UP9 236 aa12.44□□□□□ -0.42
ATG4B-213ENST00000460211 SYS1Q8N2H4 156 aa12.44□□□□□ -0.42
ATG4B-213ENST00000460211 HAVCR2Q8TDQ0 301 aa12.44□□□□□ -0.42
ATG4B-213ENST00000460211 ZNF418Q8TF45 676 aaPredicted RBP12.44□□□□□ -0.42
ATG4B-213ENST00000460211 C4orf36Q96KX1 117 aa12.44□□□□□ -0.42
ATG4B-213ENST00000460211 NUDT16L1Q9BRJ7 211 aaKnown RBP12.44□□□□□ -0.42
ATG4B-213ENST00000460211 OPN4Q9UHM6 478 aa12.44□□□□□ -0.42
ATG4B-213ENST00000460211 ARHGAP32A7KAX9 2087 aa12.43□□□□□ -0.42
ATG4B-213ENST00000460211 A0A0A6YYJ9 748 aa12.43□□□□□ -0.42
ATG4B-213ENST00000460211 A6NIN4 97 aa12.43□□□□□ -0.42
ATG4B-213ENST00000460211 NKX6-3A6NJ46 265 aa12.43□□□□□ -0.42
ATG4B-213ENST00000460211 CASQ2O14958 399 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-213ENST00000460211 AKR7A2O43488 359 aa12.43□□□□□ -0.42
ATG4B-213ENST00000460211 ECDO95905 644 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-213ENST00000460211 IGHA1P01876 353 aa12.43□□□□□ -0.42
ATG4B-213ENST00000460211 ADRA2CP18825 462 aa12.43□□□□□ -0.42
ATG4B-213ENST00000460211 EPHA1P21709 976 aa12.43□□□□□ -0.42
ATG4B-213ENST00000460211 CCR9P51686 369 aa12.43□□□□□ -0.42
ATG4B-213ENST00000460211 OGFRL1Q5TC84 451 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-213ENST00000460211 PRSS35Q8N3Z0 413 aa12.43□□□□□ -0.42
ATG4B-213ENST00000460211 PNLDC1Q8NA58 520 aaKnown RBP12.43□□□□□ -0.42
ATG4B-213ENST00000460211 OR52I1Q8NGK6 324 aa12.43□□□□□ -0.42
ATG4B-213ENST00000460211 APH1BQ8WW43 257 aa12.43□□□□□ -0.42
ATG4B-213ENST00000460211 AQP3Q92482 292 aa12.43□□□□□ -0.42
ATG4B-213ENST00000460211 TMIGD2Q96BF3 282 aa12.43□□□□□ -0.42
ATG4B-213ENST00000460211 MED30Q96HR3 178 aa12.43□□□□□ -0.42
ATG4B-213ENST00000460211 FGF23Q9GZV9 251 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-213ENST00000460211 DNTTIP1Q9H147 329 aa12.43□□□□□ -0.42
ATG4B-213ENST00000460211 ERVK13-1Q9NX77 482 aa12.43□□□□□ -0.42
ATG4B-213ENST00000460211 RASL12Q9NYN1 266 aa12.43□□□□□ -0.42
ATG4B-213ENST00000460211 FRRS1LQ9P0K9 344 aa12.43□□□□□ -0.42
ATG4B-213ENST00000460211 MYRFQ9Y2G1 1151 aa12.43□□□□□ -0.42
ATG4B-213ENST00000460211 POLDIP2Q9Y2S7 368 aa12.43□□□□□ -0.42
ATG4B-213ENST00000460211 HSPE1-MOB4S4R3N1 261 aa12.43□□□□□ -0.42
ATG4B-213ENST00000460211 LOC107986453A0A1B0GWG9 222 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 H0YAE9 185 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 H3BSH0 61 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 J3QT63 122 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 DVL1O14640 695 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 GPR37O15354 613 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 NDUFB3O43676 98 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 CLIC3O95833 236 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 ISG15P05161 165 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 PPIAL4GP0DN37 164 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 ZNF20P17024 532 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 DCKP27707 260 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 CAPGP40121 348 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 KIR3DL2P43630 455 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 HAAOP46952 286 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 GBX2P52951 348 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-213ENST00000460211 ELF3P78545 371 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-213ENST00000460211 MED21Q13503 144 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 ALKBH1Q13686 389 aaKnown RBP12.42□□□□□ -0.42
ATG4B-213ENST00000460211 LRRC10Q5BKY1 277 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 DMRTC1Q5HYR2 192 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 ATPAF1Q5TC12 328 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-213ENST00000460211 RDH10Q8IZV5 341 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 BPIFB2Q8N4F0 458 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 ZNF676Q8N7Q3 588 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 PP6455Q8WZ26 134 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 PELI1Q96FA3 418 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 CCL13Q99616 98 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 FGF20Q9NP95 211 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-213ENST00000460211 SNTG1Q9NSN8 517 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 CHCHD3Q9NX63 227 aaKnown RBP12.42□□□□□ -0.42
ATG4B-213ENST00000460211 NLKQ9UBE8 527 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 CTSZQ9UBR2 303 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 HHLA2Q9UM44 414 aa12.42□□□□□ -0.42
ATG4B-213ENST00000460211 DOCK11Q5JSL3 2073 aa12.41□□□□□ -0.42
ATG4B-213ENST00000460211 FAM230AA0A1W2PPH8 454 aa12.41□□□□□ -0.42
ATG4B-213ENST00000460211 PQLC2LA1A4F0 135 aa12.41□□□□□ -0.42
ATG4B-213ENST00000460211 ERICH4A6NGS2 130 aa12.41□□□□□ -0.42
ATG4B-213ENST00000460211 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.41□□□□□ -0.42
ATG4B-213ENST00000460211 WBP4O75554 376 aaKnown RBP12.41□□□□□ -0.42
ATG4B-213ENST00000460211 RHBDL1O75783 438 aa12.41□□□□□ -0.42
ATG4B-213ENST00000460211 CCDC159P0C7I6 412 aa12.41□□□□□ -0.42
ATG4B-213ENST00000460211 OCM2P0CE71 109 aa12.41□□□□□ -0.42
ATG4B-213ENST00000460211 OCMP0CE72 109 aaPredicted RBP12.41□□□□□ -0.42
ATG4B-213ENST00000460211 MYL12AP19105 171 aa12.41□□□□□ -0.42
ATG4B-213ENST00000460211 GABRA2P47869 451 aa12.41□□□□□ -0.42
ATG4B-213ENST00000460211 FUT6P51993 359 aa12.41□□□□□ -0.42
ATG4B-213ENST00000460211 ADARB1P78563 741 aaKnown RBP12.41□□□□□ -0.42
ATG4B-213ENST00000460211 PAX2Q02962 417 aa12.41□□□□□ -0.42
ATG4B-213ENST00000460211 SLC34A1Q06495 639 aa12.41□□□□□ -0.42
ATG4B-213ENST00000460211 CNN3Q15417 329 aaKnown RBP12.41□□□□□ -0.42
ATG4B-213ENST00000460211 STUMQ69YW2 141 aa12.41□□□□□ -0.42
ATG4B-213ENST00000460211 TMPRSS11AQ6ZMR5 421 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms