RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 ZFP1Q6P2D0 407 aa14.61□□□□□ -0.07
LSM5-204ENST00000409909 ZNF788Q6ZQV5 615 aa14.61□□□□□ -0.07
LSM5-204ENST00000409909 CATSPERDQ86XM0 798 aa14.61□□□□□ -0.07
LSM5-204ENST00000409909 OR10H4Q8NGA5 316 aa14.61□□□□□ -0.07
LSM5-204ENST00000409909 OR14K1Q8NGZ2 314 aa14.61□□□□□ -0.07
LSM5-204ENST00000409909 AQP3Q92482 292 aa14.61□□□□□ -0.07
LSM5-204ENST00000409909 RORBQ92753 470 aa14.61□□□□□ -0.07
LSM5-204ENST00000409909 HRASLS5Q96KN8 279 aa14.61□□□□□ -0.07
LSM5-204ENST00000409909 GAFA1Q96PS6 74 aa14.61□□□□□ -0.07
LSM5-204ENST00000409909 DNTTIP1Q9H147 329 aa14.61□□□□□ -0.07
LSM5-204ENST00000409909 PRDM13Q9H4Q3 707 aa14.61□□□□□ -0.07
LSM5-204ENST00000409909 CNTD2Q9H8S5 307 aa14.61□□□□□ -0.07
LSM5-204ENST00000409909 IGKV1D-17A0A075B6S4 117 aa14.6□□□□□ -0.07
LSM5-204ENST00000409909 METTL15A6NJ78 407 aa14.6□□□□□ -0.07
LSM5-204ENST00000409909 OR2AT4A6NND4 320 aa14.6□□□□□ -0.07
LSM5-204ENST00000409909 CLDN34H7C241 214 aa14.6□□□□□ -0.07
LSM5-204ENST00000409909 ENTPD6O75354 484 aa14.6□□□□□ -0.07
LSM5-204ENST00000409909 KRT8P05787 483 aa14.6□□□□□ -0.07
LSM5-204ENST00000409909 GLRA1P23415 457 aa14.6□□□□□ -0.07
LSM5-204ENST00000409909 ALDH3A2P51648 485 aa14.6□□□□□ -0.07
LSM5-204ENST00000409909 BPIFB3P59826 476 aa14.6□□□□□ -0.07
LSM5-204ENST00000409909 ZNF85Q03923 595 aa14.6□□□□□ -0.07
LSM5-204ENST00000409909 TMED1Q13445 227 aa14.6□□□□□ -0.07
LSM5-204ENST00000409909 DGUOKQ16854 277 aa14.6□□□□□ -0.07
LSM5-204ENST00000409909 ODF4Q2M2E3 257 aa14.6□□□□□ -0.07
LSM5-204ENST00000409909 CLVS2Q5SYC1 327 aa14.6□□□□□ -0.07
LSM5-204ENST00000409909 HAGHLQ6PII5 290 aaPredicted RBP14.6□□□□□ -0.07
LSM5-204ENST00000409909 CBR4Q8N4T8 237 aa14.6□□□□□ -0.07
LSM5-204ENST00000409909 TRUB1Q8WWH5 349 aaKnown RBP14.6□□□□□ -0.07
LSM5-204ENST00000409909 RFKQ969G6 155 aa14.6□□□□□ -0.07
LSM5-204ENST00000409909 RNF166Q96A37 237 aaPredicted RBP14.6□□□□□ -0.07
LSM5-204ENST00000409909 GPR173Q9NS66 373 aa14.6□□□□□ -0.07
LSM5-204ENST00000409909 NLKQ9UBE8 527 aa14.6□□□□□ -0.07
LSM5-204ENST00000409909 SULT1C4O75897 302 aa14.59□□□□□ -0.07
LSM5-204ENST00000409909 RNASE1P07998 156 aaKnown RBP14.59□□□□□ -0.07
LSM5-204ENST00000409909 ACAA1P09110 424 aaPredicted RBP14.59□□□□□ -0.07
LSM5-204ENST00000409909 HKR1P10072 659 aa14.59□□□□□ -0.07
LSM5-204ENST00000409909 CCL1P22362 96 aa14.59□□□□□ -0.07
LSM5-204ENST00000409909 ATP6V1E1P36543 226 aa14.59□□□□□ -0.07
LSM5-204ENST00000409909 CDONQ4KMG0 1287 aa14.59□□□□□ -0.07
LSM5-204ENST00000409909 AWAT1Q58HT5 328 aa14.59□□□□□ -0.07
LSM5-204ENST00000409909 LRRC10Q5BKY1 277 aa14.59□□□□□ -0.07
LSM5-204ENST00000409909 SLC25A30Q5SVS4 291 aa14.59□□□□□ -0.07
LSM5-204ENST00000409909 ZNF671Q8TAW3 534 aa14.59□□□□□ -0.07
LSM5-204ENST00000409909 LHX4Q969G2 390 aa14.59□□□□□ -0.07
LSM5-204ENST00000409909 MED30Q96HR3 178 aa14.59□□□□□ -0.07
LSM5-204ENST00000409909 ZNF488Q96MN9 340 aa14.59□□□□□ -0.07
LSM5-204ENST00000409909 MBOAT4Q96T53 435 aa14.59□□□□□ -0.07
LSM5-204ENST00000409909 DCTN5Q9BTE1 182 aa14.59□□□□□ -0.07
LSM5-204ENST00000409909 ZMAT3Q9HA38 289 aaKnown RBP14.59□□□□□ -0.07
LSM5-204ENST00000409909 IMPAD1Q9NX62 359 aa14.59□□□□□ -0.07
LSM5-204ENST00000409909 ZNF222Q9UK12 451 aa14.59□□□□□ -0.07
LSM5-204ENST00000409909 ORC6Q9Y5N6 252 aa14.59□□□□□ -0.07
LSM5-204ENST00000409909 PKD1L1Q8TDX9 2849 aa14.59□□□□□ -0.07
LSM5-204ENST00000409909 IGHV1-69DA0A0B4J2H0 117 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 PQLC2LA1A4F0 135 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 NKX6-3A6NJ46 265 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 H3BSH0 61 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 J3QRE1 110 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 DLGAP1O14490 977 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 GPR37O15354 613 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 SIGLEC5O15389 551 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 HOXA3O43365 443 aaPredicted RBP14.58□□□□□ -0.08
LSM5-204ENST00000409909 SYNGR1O43759 233 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 IGHV1-69P01742 117 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 PSG2P11465 335 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 ISL1P61371 349 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 SNRPGP62308 76 aaKnown RBP14.58□□□□□ -0.08
LSM5-204ENST00000409909 IL13RA1P78552 427 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 PDCD1Q15116 288 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 VMO1Q7Z5L0 202 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 PRSS35Q8N3Z0 413 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 C3orf56Q8N813 242 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 C8orf46Q8TAG6 207 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 TAF15Q92804 592 aaKnown RBP eCLIP14.58□□□□□ -0.08
LSM5-204ENST00000409909 SLC25A28Q96A46 364 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 TMIGD2Q96BF3 282 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 ONECUT1Q9UBC0 465 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 AASSQ9UDR5 926 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 MAB21L2Q9Y586 359 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 KPTNQ9Y664 436 aa14.58□□□□□ -0.08
LSM5-204ENST00000409909 DHRS7CA6NNS2 312 aa14.57□□□□□ -0.08
LSM5-204ENST00000409909 EBAG9O00559 213 aa14.57□□□□□ -0.08
LSM5-204ENST00000409909 HAAOP46952 286 aa14.57□□□□□ -0.08
LSM5-204ENST00000409909 GABRA2P47869 451 aa14.57□□□□□ -0.08
LSM5-204ENST00000409909 OCLNQ16625 522 aa14.57□□□□□ -0.08
LSM5-204ENST00000409909 TP53I3Q53FA7 332 aa14.57□□□□□ -0.08
LSM5-204ENST00000409909 Q6YL49 198 aa14.57□□□□□ -0.08
LSM5-204ENST00000409909 PDZD9Q8IXQ8 264 aa14.57□□□□□ -0.08
LSM5-204ENST00000409909 Q8N7P7 452 aa14.57□□□□□ -0.08
LSM5-204ENST00000409909 POC1AQ8NBT0 407 aa14.57□□□□□ -0.08
LSM5-204ENST00000409909 ZNRF1Q8ND25 227 aa14.57□□□□□ -0.08
LSM5-204ENST00000409909 GATAD2BQ8WXI9 593 aa14.57□□□□□ -0.08
LSM5-204ENST00000409909 H1FXQ92522 213 aaKnown RBP14.57□□□□□ -0.08
LSM5-204ENST00000409909 RNFT2Q96EX2 444 aa14.57□□□□□ -0.08
LSM5-204ENST00000409909 SLC29A1Q99808 456 aa14.57□□□□□ -0.08
LSM5-204ENST00000409909 S100A14Q9HCY8 104 aa14.57□□□□□ -0.08
LSM5-204ENST00000409909 ACOXLQ9NUZ1 547 aa14.57□□□□□ -0.08
LSM5-204ENST00000409909 RASL12Q9NYN1 266 aa14.57□□□□□ -0.08
LSM5-204ENST00000409909 SLC25A10Q9UBX3 287 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms