RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 SEC22CQ9BRL7 303 aa16.37■□□□□ 0.21
USP39-202ENST00000409025 GPR160Q9UJ42 338 aa16.37■□□□□ 0.21
USP39-202ENST00000409025 URB1O60287 2271 aaKnown RBP16.37■□□□□ 0.21
USP39-202ENST00000409025 CELSR3Q9NYQ7 3312 aa16.36■□□□□ 0.21
USP39-202ENST00000409025 CST4P01036 141 aa16.36■□□□□ 0.21
USP39-202ENST00000409025 SULT1A3P0DMM9 295 aa16.36■□□□□ 0.21
USP39-202ENST00000409025 SULT1A4P0DMN0 295 aa16.36■□□□□ 0.21
USP39-202ENST00000409025 HOXB1P14653 301 aaPredicted RBP16.36■□□□□ 0.21
USP39-202ENST00000409025 TBPP20226 339 aa16.36■□□□□ 0.21
USP39-202ENST00000409025 WNT5AP41221 380 aa16.36■□□□□ 0.21
USP39-202ENST00000409025 CBX5P45973 191 aa16.36■□□□□ 0.21
USP39-202ENST00000409025 PDZK1IP1Q13113 114 aa16.36■□□□□ 0.21
USP39-202ENST00000409025 PRDX4Q13162 271 aa16.36■□□□□ 0.21
USP39-202ENST00000409025 PLEKHN1Q494U1 663 aaPredicted RBP16.36■□□□□ 0.21
USP39-202ENST00000409025 OR52W1Q6IF63 320 aa16.36■□□□□ 0.21
USP39-202ENST00000409025 PXT1Q8NFP0 134 aa16.36■□□□□ 0.21
USP39-202ENST00000409025 GPR137Q96N19 417 aa16.36■□□□□ 0.21
USP39-202ENST00000409025 PECRQ9BY49 303 aa16.36■□□□□ 0.21
USP39-202ENST00000409025 EIF3KQ9UBQ5 218 aaKnown RBP16.36■□□□□ 0.21
USP39-202ENST00000409025 PTPRZ1P23471 2315 aaPredicted RBP16.36■□□□□ 0.21
USP39-202ENST00000409025 SNRPGP15A8MWD9 76 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 C1QBP02746 253 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 ZNF14P17017 642 aaPredicted RBP16.35■□□□□ 0.21
USP39-202ENST00000409025 PER3P56645 1201 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 FOXF2Q12947 444 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 MRPL49Q13405 166 aaKnown RBP16.35■□□□□ 0.21
USP39-202ENST00000409025 SPACA3Q8IXA5 215 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 PIAS4Q8N2W9 510 aaPredicted RBP16.35■□□□□ 0.21
USP39-202ENST00000409025 WBP1Q96G27 269 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 DOCK7Q96N67 2140 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 SLC6A7Q99884 636 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 PRRT1Q99946 306 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 POFUT1Q9H488 388 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 PCDHB16Q9NRJ7 776 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 PLSCR4Q9NRQ2 329 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 DKK4Q9UBT3 224 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 ANAPC10Q9UM13 185 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 SERPINE3A8MV23 424 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 CREBL2O60519 120 aaPredicted RBP16.35■□□□□ 0.21
USP39-202ENST00000409025 CSN2P05814 226 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 ANXA3P12429 323 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 GABRR1P24046 479 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 ZMYND11Q15326 602 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 SCGB2B2Q4G0G5 96 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 RTL6Q6ICC9 239 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 INO80CQ6PI98 192 aaPredicted RBP16.35■□□□□ 0.21
USP39-202ENST00000409025 SLC36A1Q7Z2H8 476 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 CD163Q86VB7 1156 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 ZDHHC23Q8IYP9 409 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 OCSTAMPQ9BR26 566 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 SLC2A8Q9NY64 477 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 IL36GQ9NZH8 169 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 ZNF69Q9UC07 566 aa16.35■□□□□ 0.21
USP39-202ENST00000409025 MBD3L4A6NDZ8 208 aaPredicted RBP16.34■□□□□ 0.21
USP39-202ENST00000409025 MBD3L3A6NE82 208 aaPredicted RBP16.34■□□□□ 0.21
USP39-202ENST00000409025 MBD3L5A6NJ08 208 aaPredicted RBP16.34■□□□□ 0.21
USP39-202ENST00000409025 J3QW42 95 aa16.34■□□□□ 0.21
USP39-202ENST00000409025 VSIG10L2P0DP72 767 aa16.34■□□□□ 0.21
USP39-202ENST00000409025 NAT1P18440 290 aa16.34■□□□□ 0.21
USP39-202ENST00000409025 CXCL3P19876 107 aa16.34■□□□□ 0.21
USP39-202ENST00000409025 COX5AP20674 150 aa16.34■□□□□ 0.21
USP39-202ENST00000409025 MPZP25189 248 aa16.34■□□□□ 0.21
USP39-202ENST00000409025 HOXC12P31275 282 aa16.34■□□□□ 0.21
USP39-202ENST00000409025 NKPD1Q17RQ9 610 aa16.34■□□□□ 0.21
USP39-202ENST00000409025 ZNF626Q68DY1 528 aa16.34■□□□□ 0.21
USP39-202ENST00000409025 LIX1LQ8IVB5 337 aa16.34■□□□□ 0.21
USP39-202ENST00000409025 C1orf162Q8NEQ5 155 aaPredicted RBP16.34■□□□□ 0.21
USP39-202ENST00000409025 OR4K15Q8NH41 348 aa16.34■□□□□ 0.21
USP39-202ENST00000409025 MBD3L2Q8NHZ7 208 aaPredicted RBP16.34■□□□□ 0.21
USP39-202ENST00000409025 ST8SIA4Q92187 359 aa16.34■□□□□ 0.21
USP39-202ENST00000409025 TRAF4Q9BUZ4 470 aaPredicted RBP16.34■□□□□ 0.21
USP39-202ENST00000409025 CDH20Q9HBT6 801 aa16.34■□□□□ 0.21
USP39-202ENST00000409025 PROCRQ9UNN8 238 aa16.34■□□□□ 0.21
USP39-202ENST00000409025 A0A1W2PR80 420 aa16.33■□□□□ 0.21
USP39-202ENST00000409025 CD300LBA8K4G0 201 aa16.33■□□□□ 0.21
USP39-202ENST00000409025 CA11O75493 328 aa16.33■□□□□ 0.21
USP39-202ENST00000409025 ERP29P30040 261 aaKnown RBP16.33■□□□□ 0.21
USP39-202ENST00000409025 HRH1P35367 487 aa16.33■□□□□ 0.21
USP39-202ENST00000409025 CXADRP78310 365 aa16.33■□□□□ 0.21
USP39-202ENST00000409025 PPA1Q15181 289 aa16.33■□□□□ 0.21
USP39-202ENST00000409025 RFPL4BQ6ZWI9 263 aa16.33■□□□□ 0.21
USP39-202ENST00000409025 ZSCAN4Q8NAM6 433 aaPredicted RBP16.33■□□□□ 0.21
USP39-202ENST00000409025 NAXEQ8NCW5 288 aa16.33■□□□□ 0.21
USP39-202ENST00000409025 OR51F2Q8NH61 342 aa16.33■□□□□ 0.21
USP39-202ENST00000409025 MRPS24Q96EL2 167 aaKnown RBP16.33■□□□□ 0.21
USP39-202ENST00000409025 BOD1Q96IK1 185 aa16.33■□□□□ 0.21
USP39-202ENST00000409025 OR51B6Q9H340 312 aa16.33■□□□□ 0.21
USP39-202ENST00000409025 PLEKHJ1Q9NW61 149 aa16.33■□□□□ 0.21
USP39-202ENST00000409025 LUZP4Q9P127 313 aa16.33■□□□□ 0.21
USP39-202ENST00000409025 MEIKINA0A087WXM9 373 aa16.33■□□□□ 0.2
USP39-202ENST00000409025 IGKV1-12A0A0C4DH73 117 aa16.33■□□□□ 0.2
USP39-202ENST00000409025 TMEM82A0PJX8 343 aa16.33■□□□□ 0.2
USP39-202ENST00000409025 PQLC2LA1A4F0 135 aa16.33■□□□□ 0.2
USP39-202ENST00000409025 IGKV1D-12P01611 117 aa16.33■□□□□ 0.2
USP39-202ENST00000409025 IFNA6P05013 189 aa16.33■□□□□ 0.2
USP39-202ENST00000409025 GZMKP49863 264 aa16.33■□□□□ 0.2
USP39-202ENST00000409025 IDH3GP51553 393 aaPredicted RBP16.33■□□□□ 0.2
USP39-202ENST00000409025 CEACAM21Q3KPI0 293 aa16.33■□□□□ 0.2
USP39-202ENST00000409025 ACTBL2Q562R1 376 aa16.33■□□□□ 0.2
USP39-202ENST00000409025 OSR2Q8N2R0 312 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms