RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 TMEM80Q96HE8 168 aa7□□□□□ -1.29
BRCC3-205ENST00000399026 RNF170Q96K19 258 aa7□□□□□ -1.29
BRCC3-205ENST00000399026 CNBD2Q96M20 576 aa7□□□□□ -1.29
BRCC3-205ENST00000399026 PDCD1LG2Q9BQ51 273 aa7□□□□□ -1.29
BRCC3-205ENST00000399026 ANKRD60Q9BZ19 345 aa7□□□□□ -1.29
BRCC3-205ENST00000399026 ABCB9Q9NP78 766 aa7□□□□□ -1.29
BRCC3-205ENST00000399026 RNF7Q9UBF6 113 aa7□□□□□ -1.29
BRCC3-205ENST00000399026 PSORS1C1Q9UIG5 152 aa7□□□□□ -1.29
BRCC3-205ENST00000399026 KCNS2Q9ULS6 477 aa7□□□□□ -1.29
BRCC3-205ENST00000399026 PCDHB10Q9UN67 800 aa7□□□□□ -1.29
BRCC3-205ENST00000399026 EXOSC1Q9Y3B2 195 aaKnown RBP7□□□□□ -1.29
BRCC3-205ENST00000399026 PCDHGB5Q9Y5G0 923 aa7□□□□□ -1.29
BRCC3-205ENST00000399026 SONP18583 2426 aaKnown RBP7□□□□□ -1.29
BRCC3-205ENST00000399026 SETD2Q9BYW2 2564 aaPredicted RBP6.99□□□□□ -1.29
BRCC3-205ENST00000399026 SVEP1Q4LDE5 3571 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 PPIAL4EA0A075B759 164 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 PNMA8CA0A1B0GUJ8 204 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 EFCAB10A6NFE3 127 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 ANKRD61A6NGH8 418 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 TMEM210A6NLX4 147 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 OR4C45A6NMZ5 311 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 A8MV72 311 aaPredicted RBP6.99□□□□□ -1.29
BRCC3-205ENST00000399026 PPIAL4DF5H284 164 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 IFNL4K9M1U5 179 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 MYL12BO14950 172 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 RHBDL1O75783 438 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 PLATP00750 562 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 NRASP01111 189 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 TFF1P04155 84 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 PPIAL4FP0DN26 164 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 ZNF20P17024 532 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 C21orf33P30042 268 aaPredicted RBP6.99□□□□□ -1.29
BRCC3-205ENST00000399026 HSPA13P48723 471 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 GBX2P52951 348 aaPredicted RBP6.99□□□□□ -1.29
BRCC3-205ENST00000399026 LCN2P80188 198 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 CDK5R1Q15078 307 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 CEACAM21Q3KPI0 293 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 ZNF404Q494X3 552 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 TMEM155Q4W5P6 130 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 CLVS2Q5SYC1 327 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 ZBTB37Q5TC79 503 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 HAGHLQ6PII5 290 aaPredicted RBP6.99□□□□□ -1.29
BRCC3-205ENST00000399026 KCTD20Q7Z5Y7 419 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 MUC20Q8N307 709 aaPredicted RBP6.99□□□□□ -1.29
BRCC3-205ENST00000399026 SCCPDHQ8NBX0 429 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 OR13C3Q8NGS6 347 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 OR13C5Q8NGS8 318 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 OR51F2Q8NH61 342 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 TSEN15Q8WW01 171 aaKnown RBP6.99□□□□□ -1.29
BRCC3-205ENST00000399026 GATAD2BQ8WXI9 593 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 RGP1Q92546 391 aaPredicted RBP6.99□□□□□ -1.29
BRCC3-205ENST00000399026 ERGIC1Q969X5 290 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 ADAT3Q96EY9 351 aaPredicted RBP6.99□□□□□ -1.29
BRCC3-205ENST00000399026 HIST1H2AAQ96QV6 131 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 TMEM246Q9BRR3 403 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 CHST5Q9GZS9 411 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 TLNRD1Q9H1K6 362 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 SNTG1Q9NSN8 517 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 PAK1IP1Q9NWT1 392 aaPredicted RBP6.99□□□□□ -1.29
BRCC3-205ENST00000399026 CNOT2Q9NZN8 540 aaKnown RBP6.99□□□□□ -1.29
BRCC3-205ENST00000399026 ERVK-18Q9QC07 812 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 CAB39Q9Y376 341 aaPredicted RBP6.99□□□□□ -1.29
BRCC3-205ENST00000399026 PPIAL4AQ9Y536 164 aa6.99□□□□□ -1.29
BRCC3-205ENST00000399026 SIRT4Q9Y6E7 314 aaPredicted RBP6.99□□□□□ -1.29
BRCC3-205ENST00000399026 HIVEP2P31629 2446 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 TRBV2A0A0J9YWF9 115 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 TMEM238LA0A1B0GVL6 79 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 A0A1B0GW55 424 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 FAM230AA0A1W2PPH8 454 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 OOEPA6NGQ2 149 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 OR5B21A6NL26 309 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 TMEM212A6NML5 194 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 DHRS7CA6NNS2 312 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 B4DSR2 109 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 F5H0A9 414 aaPredicted RBP6.98□□□□□ -1.29
BRCC3-205ENST00000399026 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.98□□□□□ -1.29
BRCC3-205ENST00000399026 LGALS8O00214 317 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 PHF1O43189 567 aaPredicted RBP6.98□□□□□ -1.29
BRCC3-205ENST00000399026 PAX4O43316 350 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 AKR7A2O43488 359 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 PLPP2O43688 288 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 SYNGR1O43759 233 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 ZFPL1O95159 310 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 GYPAP02724 150 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 MSMBP08118 114 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 CCDC159P0C7I6 412 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 DUX4L2P0CJ85 424 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 DUX4L3P0CJ86 424 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 DUX4L4P0CJ87 422 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 DUX4L5P0CJ88 424 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 DUX4L6P0CJ89 424 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 DUX4L7P0CJ90 424 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 ZFP36P26651 326 aaKnown RBP6.98□□□□□ -1.29
BRCC3-205ENST00000399026 HAAOP46952 286 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 CCR9P51686 369 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 GNG3P63215 75 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 UBE2V2Q15819 145 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 C6orf141Q5SZD1 244 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 TMEM244Q5VVB8 128 aa6.98□□□□□ -1.29
BRCC3-205ENST00000399026 TMEM42Q69YG0 159 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms