RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 ZCCHC4Q9H5U6 513 aa16.13■□□□□ 0.17
HOXA9-202ENST00000396345 PPIAL4AQ9Y536 164 aa16.13■□□□□ 0.17
HOXA9-202ENST00000396345 IGKV1-9A0A0C4DH69 117 aa16.12■□□□□ 0.17
HOXA9-202ENST00000396345 LHBP01229 141 aa16.12■□□□□ 0.17
HOXA9-202ENST00000396345 PRKACBP22694 351 aa16.12■□□□□ 0.17
HOXA9-202ENST00000396345 HAAOP46952 286 aa16.12■□□□□ 0.17
HOXA9-202ENST00000396345 TMEM249Q2WGJ8 235 aa16.12■□□□□ 0.17
HOXA9-202ENST00000396345 HAGHLQ6PII5 290 aaPredicted RBP16.12■□□□□ 0.17
HOXA9-202ENST00000396345 MUC20Q8N307 709 aaPredicted RBP16.12■□□□□ 0.17
HOXA9-202ENST00000396345 SVOPQ8N4V2 548 aa16.12■□□□□ 0.17
HOXA9-202ENST00000396345 GCSAMQ8N6F7 178 aa16.12■□□□□ 0.17
HOXA9-202ENST00000396345 OR13C9Q8NGT0 318 aa16.12■□□□□ 0.17
HOXA9-202ENST00000396345 OR10Z1Q8NGY1 313 aa16.12■□□□□ 0.17
HOXA9-202ENST00000396345 BORCS8Q96FH0 119 aa16.12■□□□□ 0.17
HOXA9-202ENST00000396345 GAL3ST1Q99999 423 aa16.12■□□□□ 0.17
HOXA9-202ENST00000396345 ISYNA1Q9NPH2 558 aa16.12■□□□□ 0.17
HOXA9-202ENST00000396345 ACOT13Q9NPJ3 140 aa16.12■□□□□ 0.17
HOXA9-202ENST00000396345 TRBV5-5A0A0J9YX44 114 aa16.11■□□□□ 0.17
HOXA9-202ENST00000396345 FSTL3O95633 263 aa16.11■□□□□ 0.17
HOXA9-202ENST00000396345 HEXAP06865 529 aa16.11■□□□□ 0.17
HOXA9-202ENST00000396345 OCMP0CE72 109 aaPredicted RBP16.11■□□□□ 0.17
HOXA9-202ENST00000396345 IL2RGP31785 369 aa16.11■□□□□ 0.17
HOXA9-202ENST00000396345 CD80P33681 288 aa16.11■□□□□ 0.17
HOXA9-202ENST00000396345 CFHR2P36980 270 aa16.11■□□□□ 0.17
HOXA9-202ENST00000396345 RIPPLY3P57055 190 aa16.11■□□□□ 0.17
HOXA9-202ENST00000396345 RPS11P62280 158 aaKnown RBP eCLIP16.11■□□□□ 0.17
HOXA9-202ENST00000396345 HOXA4Q00056 320 aaPredicted RBP16.11■□□□□ 0.17
HOXA9-202ENST00000396345 EMX1Q04741 257 aaPredicted RBP16.11■□□□□ 0.17
HOXA9-202ENST00000396345 GPR50Q13585 617 aa16.11■□□□□ 0.17
HOXA9-202ENST00000396345 Q499Y3 187 aa16.11■□□□□ 0.17
HOXA9-202ENST00000396345 TMEM155Q4W5P6 130 aa16.11■□□□□ 0.17
HOXA9-202ENST00000396345 ZNF367Q7RTV3 350 aa16.11■□□□□ 0.17
HOXA9-202ENST00000396345 SPICQ8N5J4 248 aa16.11■□□□□ 0.17
HOXA9-202ENST00000396345 C19orf18Q8NEA5 215 aa16.11■□□□□ 0.17
HOXA9-202ENST00000396345 DNAAF1Q8NEP3 725 aa16.11■□□□□ 0.17
HOXA9-202ENST00000396345 ZNF671Q8TAW3 534 aa16.11■□□□□ 0.17
HOXA9-202ENST00000396345 AQP3Q92482 292 aa16.11■□□□□ 0.17
HOXA9-202ENST00000396345 UFD1Q92890 307 aa16.11■□□□□ 0.17
HOXA9-202ENST00000396345 TMEM106AQ96A25 262 aa16.11■□□□□ 0.17
HOXA9-202ENST00000396345 TMEM165Q9HC07 324 aa16.11■□□□□ 0.17
HOXA9-202ENST00000396345 NEK6Q9HC98 313 aa16.11■□□□□ 0.17
HOXA9-202ENST00000396345 YLPM1P49750 1951 aaKnown RBP16.11■□□□□ 0.17
HOXA9-202ENST00000396345 LGALS8O00214 317 aa16.1■□□□□ 0.17
HOXA9-202ENST00000396345 RHBDL1O75783 438 aa16.1■□□□□ 0.17
HOXA9-202ENST00000396345 EGR1P18146 543 aa16.1■□□□□ 0.17
HOXA9-202ENST00000396345 AZGP1P25311 298 aaKnown RBP16.1■□□□□ 0.17
HOXA9-202ENST00000396345 RBP2P50120 134 aa16.1■□□□□ 0.17
HOXA9-202ENST00000396345 ATP1B3P54709 279 aa16.1■□□□□ 0.17
HOXA9-202ENST00000396345 LMO4P61968 165 aa16.1■□□□□ 0.17
HOXA9-202ENST00000396345 MLLT11Q13015 90 aaPredicted RBP16.1■□□□□ 0.17
HOXA9-202ENST00000396345 KCTD21Q4G0X4 260 aa16.1■□□□□ 0.17
HOXA9-202ENST00000396345 LIPKQ5VXJ0 399 aa16.1■□□□□ 0.17
HOXA9-202ENST00000396345 SFRP4Q6FHJ7 346 aaPredicted RBP16.1■□□□□ 0.17
HOXA9-202ENST00000396345 BIVMQ86UB2 503 aa16.1■□□□□ 0.17
HOXA9-202ENST00000396345 SPARTQ8N0X7 666 aa16.1■□□□□ 0.17
HOXA9-202ENST00000396345 DEFB108BQ8NET1 73 aa16.1■□□□□ 0.17
HOXA9-202ENST00000396345 SPSB1Q96BD6 273 aa16.1■□□□□ 0.17
HOXA9-202ENST00000396345 OPALINQ96PE5 141 aa16.1■□□□□ 0.17
HOXA9-202ENST00000396345 MGLLQ99685 303 aa16.1■□□□□ 0.17
HOXA9-202ENST00000396345 SMR3AQ99954 134 aa16.1■□□□□ 0.17
HOXA9-202ENST00000396345 ZNF665Q9H7R5 613 aa16.1■□□□□ 0.17
HOXA9-202ENST00000396345 PCDHB10Q9UN67 800 aa16.1■□□□□ 0.17
HOXA9-202ENST00000396345 LRCH1Q9Y2L9 728 aa16.1■□□□□ 0.17
HOXA9-202ENST00000396345 IGKV1-27A0A075B6S5 117 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 OOEPA6NGQ2 149 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 SRRM5B3KS81 715 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 C3orf80F5H4A9 247 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 J3QT63 122 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 AKR7A2O43488 359 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 SULT1B1O43704 296 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 ALX3O95076 343 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 IGHV2-5P01817 119 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 IGHV4-31P0DP07 118 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 MTCP1P56278 107 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 TPBGQ13641 420 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 ZNF404Q494X3 552 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 ZNF773Q6PK81 442 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 LHFPL2Q6ZUX7 228 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 ANGPTL5Q86XS5 388 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 CALHM1Q8IU99 346 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 MS4A15Q8N5U1 240 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 RAB39BQ96DA2 213 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 OR14A2Q96R54 314 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 TMEM246Q9BRR3 403 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 TMED9Q9BVK6 235 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 PKIBQ9C010 78 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 TAS2R4Q9NYW5 299 aa16.09■□□□□ 0.17
HOXA9-202ENST00000396345 CSPG4Q6UVK1 2322 aa16.08■□□□□ 0.17
HOXA9-202ENST00000396345 TRAV38-1A0A0B4J264 116 aa16.08■□□□□ 0.16
HOXA9-202ENST00000396345 ZNF879B4DU55 563 aa16.08■□□□□ 0.16
HOXA9-202ENST00000396345 SYNGR1O43759 233 aa16.08■□□□□ 0.16
HOXA9-202ENST00000396345 CPEP16870 476 aa16.08■□□□□ 0.16
HOXA9-202ENST00000396345 RAB3AP20336 220 aa16.08■□□□□ 0.16
HOXA9-202ENST00000396345 GZMKP49863 264 aa16.08■□□□□ 0.16
HOXA9-202ENST00000396345 GMFBP60983 142 aa16.08■□□□□ 0.16
HOXA9-202ENST00000396345 KCNJ8Q15842 424 aa16.08■□□□□ 0.16
HOXA9-202ENST00000396345 TEX36Q5VZQ5 186 aa16.08■□□□□ 0.16
HOXA9-202ENST00000396345 CYB5R2Q6BCY4 276 aa16.08■□□□□ 0.16
HOXA9-202ENST00000396345 POLDIP2Q9Y2S7 368 aa16.08■□□□□ 0.16
HOXA9-202ENST00000396345 ABCA1O95477 2261 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms