RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 RAD51DO75771 328 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 CD74P04233 296 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 AKAIN1P0CW23 69 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 ASCL1P50553 236 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 FAM3AP98173 230 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 TGFBR3Q03167 851 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 FAM27E3Q08E93 113 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 P2RY6Q15077 328 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 TSC22D1Q15714 1073 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 TMEM104Q8NE00 496 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 OR10R2Q8NGX6 335 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 MED30Q96HR3 178 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 TECTBQ96PL2 329 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 MOV10Q9HCE1 1003 aaKnown RBP13.03□□□□□ -0.32
SCAF11-204ENST00000395454 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.03□□□□□ -0.32
SCAF11-204ENST00000395454 ANAPC10Q9UM13 185 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 TENM4Q6N022 2769 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 HELZ2Q9BYK8 2649 aaKnown RBP13.03□□□□□ -0.32
SCAF11-204ENST00000395454 A0A096LPE4 126 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 A0A0A6YYD4 124 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 A0A1W2PPZ6 126 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 ICMTO60725 284 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 COX5AP20674 150 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 AGAP20933 346 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 RAB25P57735 213 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 TAS2R19P59542 299 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 ZP1P60852 638 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 CD276Q5ZPR3 534 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 SFRP4Q6FHJ7 346 aaPredicted RBP13.03□□□□□ -0.32
SCAF11-204ENST00000395454 ZNF101Q8IZC7 436 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 ACBD4Q8NC06 268 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 OR1K1Q8NGR3 316 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 CPNE2Q96FN4 548 aaPredicted RBP13.03□□□□□ -0.32
SCAF11-204ENST00000395454 BOD1Q96IK1 185 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 TMEM59Q9BXS4 323 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 CST11Q9H112 138 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 NOX3Q9HBY0 568 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 MCUBQ9NWR8 336 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 CLDN14O95500 239 aa13.02□□□□□ -0.32
SCAF11-204ENST00000395454 HLA-HP01893 362 aa13.02□□□□□ -0.32
SCAF11-204ENST00000395454 GSTP1P09211 210 aaKnown RBP13.02□□□□□ -0.32
SCAF11-204ENST00000395454 PRKACBP22694 351 aa13.02□□□□□ -0.32
SCAF11-204ENST00000395454 MPZP25189 248 aa13.02□□□□□ -0.32
SCAF11-204ENST00000395454 RPS27AP62979 156 aaKnown RBP13.02□□□□□ -0.32
SCAF11-204ENST00000395454 ZNF92Q03936 586 aa13.02□□□□□ -0.32
SCAF11-204ENST00000395454 CNN3Q15417 329 aaKnown RBP13.02□□□□□ -0.32
SCAF11-204ENST00000395454 CLVS2Q5SYC1 327 aa13.02□□□□□ -0.32
SCAF11-204ENST00000395454 SEZ6L2Q6UXD5 910 aa13.02□□□□□ -0.32
SCAF11-204ENST00000395454 ASCL4Q6XD76 172 aa13.02□□□□□ -0.32
SCAF11-204ENST00000395454 Q6ZTK2 550 aa13.02□□□□□ -0.32
SCAF11-204ENST00000395454 BCL2L2Q92843 193 aaPredicted RBP13.02□□□□□ -0.32
SCAF11-204ENST00000395454 RNF170Q96K19 258 aa13.02□□□□□ -0.32
SCAF11-204ENST00000395454 TM2D1Q9BX74 207 aa13.02□□□□□ -0.32
SCAF11-204ENST00000395454 RANGRFQ9HD47 186 aaPredicted RBP13.02□□□□□ -0.32
SCAF11-204ENST00000395454 NPDC1Q9NQX5 325 aaPredicted RBP13.02□□□□□ -0.32
SCAF11-204ENST00000395454 ELOVL5Q9NYP7 299 aa13.02□□□□□ -0.32
SCAF11-204ENST00000395454 MYEF2Q9P2K5 600 aaKnown RBP13.02□□□□□ -0.32
SCAF11-204ENST00000395454 LRRK2Q5S007 2527 aa13.02□□□□□ -0.33
SCAF11-204ENST00000395454 DOPEY1Q5JWR5 2465 aa13.02□□□□□ -0.33
SCAF11-204ENST00000395454 TMEM235A6NFC5 223 aa13.01□□□□□ -0.33
SCAF11-204ENST00000395454 GTF2F2P13984 249 aa13.01□□□□□ -0.33
SCAF11-204ENST00000395454 RCVRNP35243 200 aa13.01□□□□□ -0.33
SCAF11-204ENST00000395454 RBMS2Q15434 407 aaKnown RBP13.01□□□□□ -0.33
SCAF11-204ENST00000395454 STEAP1BQ6NZ63 245 aa13.01□□□□□ -0.33
SCAF11-204ENST00000395454 PIAS4Q8N2W9 510 aaPredicted RBP13.01□□□□□ -0.33
SCAF11-204ENST00000395454 GIMAP1Q8WWP7 306 aa13.01□□□□□ -0.33
SCAF11-204ENST00000395454 POM121L2Q96KW2 1035 aa13.01□□□□□ -0.33
SCAF11-204ENST00000395454 ZNF75AQ96N20 296 aa13.01□□□□□ -0.33
SCAF11-204ENST00000395454 OR51J1Q9H342 316 aa13.01□□□□□ -0.33
SCAF11-204ENST00000395454 NEK6Q9HC98 313 aa13.01□□□□□ -0.33
SCAF11-204ENST00000395454 IL32P24001 234 aa13.01□□□□□ -0.33
SCAF11-204ENST00000395454 SRSF1Q07955 248 aaKnown RBP eCLIP13.01□□□□□ -0.33
SCAF11-204ENST00000395454 ZFP69Q49AA0 526 aa13.01□□□□□ -0.33
SCAF11-204ENST00000395454 FAAP20Q6NZ36 180 aa13.01□□□□□ -0.33
SCAF11-204ENST00000395454 TMEM53Q6P2H8 277 aa13.01□□□□□ -0.33
SCAF11-204ENST00000395454 ZNF584Q8IVC4 421 aa13.01□□□□□ -0.33
SCAF11-204ENST00000395454 ZBTB8BQ8NAP8 495 aaPredicted RBP13.01□□□□□ -0.33
SCAF11-204ENST00000395454 OR56B1Q8NGI3 324 aa13.01□□□□□ -0.33
SCAF11-204ENST00000395454 OR4D10Q8NGI6 311 aa13.01□□□□□ -0.33
SCAF11-204ENST00000395454 CMBLQ96DG6 245 aa13.01□□□□□ -0.33
SCAF11-204ENST00000395454 LRRC46Q96FV0 321 aa13.01□□□□□ -0.33
SCAF11-204ENST00000395454 FYTTD1Q96QD9 318 aaKnown RBP13.01□□□□□ -0.33
SCAF11-204ENST00000395454 GPER1Q99527 375 aa13.01□□□□□ -0.33
SCAF11-204ENST00000395454 NICN1Q9BSH3 213 aa13.01□□□□□ -0.33
SCAF11-204ENST00000395454 URM1Q9BTM9 101 aaKnown RBP13.01□□□□□ -0.33
SCAF11-204ENST00000395454 REPIN1Q9BWE0 567 aaKnown RBP13.01□□□□□ -0.33
SCAF11-204ENST00000395454 MFNGO00587 321 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 CD3DP04234 171 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 IL5P05113 134 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 SERPINA5P05154 406 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 RNF224P0DH78 156 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 STOMP27105 288 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 HOXC12P31275 282 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 VEGFCP49767 419 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 KCNJ8Q15842 424 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 PNLIPRP3Q17RR3 467 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 FBXL19-AS1Q494R0 122 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 CDNFQ49AH0 187 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 HIKESHIQ53FT3 197 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 PLAC9Q5JTB6 97 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms