RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 PMP2P02689 132 aa13□□□□□ -0.33
SNX2-201ENST00000379516 IGHV1-2P23083 117 aa13□□□□□ -0.33
SNX2-201ENST00000379516 TGFBR3Q03167 851 aa13□□□□□ -0.33
SNX2-201ENST00000379516 C4orf46Q504U0 113 aa13□□□□□ -0.33
SNX2-201ENST00000379516 TMED4Q7Z7H5 227 aa13□□□□□ -0.33
SNX2-201ENST00000379516 C9orf106Q8NAJ2 232 aa13□□□□□ -0.33
SNX2-201ENST00000379516 OR13C8Q8NGS7 320 aa13□□□□□ -0.33
SNX2-201ENST00000379516 ZFAND1Q8TCF1 268 aa13□□□□□ -0.33
SNX2-201ENST00000379516 SNAPC3Q92966 411 aa13□□□□□ -0.33
SNX2-201ENST00000379516 HYLS1Q96M11 299 aa13□□□□□ -0.33
SNX2-201ENST00000379516 Q96M66 194 aa13□□□□□ -0.33
SNX2-201ENST00000379516 PRRT1Q99946 306 aa13□□□□□ -0.33
SNX2-201ENST00000379516 TMEM246Q9BRR3 403 aa13□□□□□ -0.33
SNX2-201ENST00000379516 RANBP3Q9H6Z4 567 aaPredicted RBP13□□□□□ -0.33
SNX2-201ENST00000379516 EIF3KQ9UBQ5 218 aaKnown RBP13□□□□□ -0.33
SNX2-201ENST00000379516 IFNA6P05013 189 aa13□□□□□ -0.33
SNX2-201ENST00000379516 SERPINA5P05154 406 aa13□□□□□ -0.33
SNX2-201ENST00000379516 SPINK2P20155 84 aa13□□□□□ -0.33
SNX2-201ENST00000379516 PDZK1IP1Q13113 114 aa13□□□□□ -0.33
SNX2-201ENST00000379516 SEZ6L2Q6UXD5 910 aa13□□□□□ -0.33
SNX2-201ENST00000379516 SLC30A7Q8NEW0 376 aa13□□□□□ -0.33
SNX2-201ENST00000379516 FBXW5Q969U6 566 aa13□□□□□ -0.33
SNX2-201ENST00000379516 OCSTAMPQ9BR26 566 aa13□□□□□ -0.33
SNX2-201ENST00000379516 DLL4Q9NR61 685 aa13□□□□□ -0.33
SNX2-201ENST00000379516 SLC2A8Q9NY64 477 aa13□□□□□ -0.33
SNX2-201ENST00000379516 FAM186AA6NE01 2351 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 FRYQ5TBA9 3013 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 AKAP13Q12802 2813 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 A0A1W2PR80 420 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 FAM172BPA6NC97 362 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 ZNF780AO75290 641 aaPredicted RBP12.99□□□□□ -0.33
SNX2-201ENST00000379516 LYZL6O75951 148 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 PDGFAP04085 211 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 TBPP20226 339 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 WNT5AP41221 380 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 CBX5P45973 191 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 UBE2NP61088 152 aaKnown RBP12.99□□□□□ -0.33
SNX2-201ENST00000379516 FOXC1Q12948 553 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 GUSBP1Q15486 140 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 NKAPLQ5M9Q1 402 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 ZNF585AQ6P3V2 769 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 ASCL4Q6XD76 172 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 C6orf201Q7Z4U5 140 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 CCDC107Q8WV48 283 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 ST8SIA4Q92187 359 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 WNT2BQ93097 391 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 CHIAQ9BZP6 476 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 OR51B6Q9H340 312 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.99□□□□□ -0.33
SNX2-201ENST00000379516 PLEKHJ1Q9NW61 149 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 ANAPC10Q9UM13 185 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 NPTNQ9Y639 398 aa12.99□□□□□ -0.33
SNX2-201ENST00000379516 PRRC2CQ9Y520 2896 aaKnown RBP12.99□□□□□ -0.33
SNX2-201ENST00000379516 IGKV1-12A0A0C4DH73 117 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 SERPINE3A8MV23 424 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 IGKV1D-12P01611 117 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 NAT1P18440 290 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 MPZP25189 248 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 KIR2DL2P43627 348 aaPredicted RBP12.98□□□□□ -0.33
SNX2-201ENST00000379516 PRDX4Q13162 271 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 ARL6IP1Q15041 203 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 TAF9Q16594 264 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 ACSF3Q4G176 576 aaPredicted RBP12.98□□□□□ -0.33
SNX2-201ENST00000379516 Q5BKY6 102 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 ATPAF1Q5TC12 328 aaPredicted RBP12.98□□□□□ -0.33
SNX2-201ENST00000379516 Q6ZS92 163 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 Q6ZT83 130 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 NLRC3Q7RTR2 1065 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 MUC20Q8N307 709 aaPredicted RBP12.98□□□□□ -0.33
SNX2-201ENST00000379516 SPICQ8N5J4 248 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 UXS1Q8NBZ7 420 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 OR51F2Q8NH61 342 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 WBP1Q96G27 269 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 ST6GALNAC5Q9BVH7 336 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 ALX4Q9H161 411 aaPredicted RBP12.98□□□□□ -0.33
SNX2-201ENST00000379516 CA10Q9NS85 328 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 CRIM1Q9NZV1 1036 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 ARHGAP21Q5T5U3 1957 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 TNRC6AQ8NDV7 1962 aaKnown RBP12.98□□□□□ -0.33
SNX2-201ENST00000379516 AHRRA9YTQ3 701 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 ATP6V1G1O75348 118 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 OR4E1P0C645 316 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 ZMYND11Q15326 602 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 MICBQ29980 383 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 VWA1Q6PCB0 445 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 CALHM1Q8IU99 346 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 CSNK2A3Q8NEV1 391 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 PXT1Q8NFP0 134 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 ZNF75AQ96N20 296 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 ZNF230Q9UIE0 474 aaPredicted RBP12.98□□□□□ -0.33
SNX2-201ENST00000379516 MGAT4AQ9UM21 535 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 VSIG4Q9Y279 399 aa12.98□□□□□ -0.33
SNX2-201ENST00000379516 K7EM74 188 aa12.97□□□□□ -0.33
SNX2-201ENST00000379516 AMY2BP19961 511 aa12.97□□□□□ -0.33
SNX2-201ENST00000379516 UBE2MP61081 183 aaKnown RBP12.97□□□□□ -0.33
SNX2-201ENST00000379516 SNRPD2P62316 118 aaKnown RBP12.97□□□□□ -0.33
SNX2-201ENST00000379516 TBC1D28Q2M2D7 210 aa12.97□□□□□ -0.33
SNX2-201ENST00000379516 OR2A2Q6IF42 318 aa12.97□□□□□ -0.33
SNX2-201ENST00000379516 ZDHHC23Q8IYP9 409 aa12.97□□□□□ -0.33
SNX2-201ENST00000379516 OSR2Q8N2R0 312 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms